RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CTTNBP2Q8WZ74 1663 aa9.93□□□□□ -0.82
PTCD3-208ENST00000469585 ARAP1Q96P48 1450 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 BACH1O14867 736 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 EPHA4P54764 986 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 CTC1Q2NKJ3 1217 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 CNKSR1Q969H4 720 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 ESYT1Q9BSJ8 1104 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
PTCD3-208ENST00000469585 SERTAD1Q9UHV2 236 aa9.92□□□□□ -0.82
PTCD3-208ENST00000469585 LINC00528Q8N1L1 170 aa9.91□□□□□ -0.82
PTCD3-208ENST00000469585 CRIPAKQ8N1N5 446 aa9.91□□□□□ -0.82
PTCD3-208ENST00000469585 TSEN34Q9BSV6 310 aaKnown RBP9.91□□□□□ -0.82
PTCD3-208ENST00000469585 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
PTCD3-208ENST00000469585 SPINT1O43278 529 aa9.9□□□□□ -0.82
PTCD3-208ENST00000469585 MTFR1Q15390 333 aa9.9□□□□□ -0.82
PTCD3-208ENST00000469585 TNS4Q8IZW8 715 aa9.9□□□□□ -0.82
PTCD3-208ENST00000469585 PTPRGP23470 1445 aa9.9□□□□□ -0.83
PTCD3-208ENST00000469585 SMTNP53814 917 aa9.89□□□□□ -0.83
PTCD3-208ENST00000469585 FHDC1Q9C0D6 1143 aaPredicted RBP9.89□□□□□ -0.83
PTCD3-208ENST00000469585 KIF21BO75037 1637 aa9.89□□□□□ -0.83
PTCD3-208ENST00000469585 A6NJY4 79 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 MEN1O00255 615 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 LGR5O75473 907 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 WEE1P30291 646 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 RANGAP1P46060 587 aaPredicted RBP9.88□□□□□ -0.83
PTCD3-208ENST00000469585 FOXK2Q01167 660 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 CENPCQ03188 943 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 OCLNQ16625 522 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 MRPL14Q6P1L8 145 aaKnown RBP9.88□□□□□ -0.83
PTCD3-208ENST00000469585 HINFPQ9BQA5 517 aa9.88□□□□□ -0.83
PTCD3-208ENST00000469585 AXIN1O15169 862 aa9.87□□□□□ -0.83
PTCD3-208ENST00000469585 SSFA2P28290 1259 aa9.87□□□□□ -0.83
PTCD3-208ENST00000469585 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
PTCD3-208ENST00000469585 TRIM46Q7Z4K8 759 aa9.87□□□□□ -0.83
PTCD3-208ENST00000469585 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-208ENST00000469585 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-208ENST00000469585 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
PTCD3-208ENST00000469585 UGGT2Q9NYU1 1516 aa9.87□□□□□ -0.83
PTCD3-208ENST00000469585 PRMT3O60678 531 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 UPP2O95045 317 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 BRD1O95696 1058 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 BMP1P13497 986 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 TLR1Q15399 786 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 PRIMPOLQ96LW4 560 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 IQSEC3Q9UPP2 1182 aaPredicted RBP9.86□□□□□ -0.83
PTCD3-208ENST00000469585 USP3Q9Y6I4 520 aa9.86□□□□□ -0.83
PTCD3-208ENST00000469585 C21orf2O43822 256 aa9.85□□□□□ -0.83
PTCD3-208ENST00000469585 ATP2B4P23634 1241 aa9.85□□□□□ -0.83
PTCD3-208ENST00000469585 GPC1P35052 558 aa9.85□□□□□ -0.83
PTCD3-208ENST00000469585 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
PTCD3-208ENST00000469585 C6orf118Q5T5N4 469 aa9.85□□□□□ -0.83
PTCD3-208ENST00000469585 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
PTCD3-208ENST00000469585 TSPAN10Q9H1Z9 355 aaPredicted RBP9.85□□□□□ -0.83
PTCD3-208ENST00000469585 CXXC1Q9P0U4 656 aaPredicted RBP9.85□□□□□ -0.83
PTCD3-208ENST00000469585 CDK2AP1O14519 115 aa9.84□□□□□ -0.83
PTCD3-208ENST00000469585 BMP2P12643 396 aa9.84□□□□□ -0.83
PTCD3-208ENST00000469585 CTSOP43234 321 aaPredicted RBP9.84□□□□□ -0.83
PTCD3-208ENST00000469585 ZNF295-AS1Q8N0V1 137 aa9.84□□□□□ -0.83
PTCD3-208ENST00000469585 GRIP2Q9C0E4 1043 aa9.84□□□□□ -0.83
PTCD3-208ENST00000469585 KIAA0556O60303 1618 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 ST8SIA5O15466 376 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 IGFBP4P22692 258 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 B4GALNT3Q6L9W6 998 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 SLC9A9Q8IVB4 645 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 C1orf216Q8TAB5 229 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 SCG3Q8WXD2 468 aaKnown RBP9.83□□□□□ -0.84
PTCD3-208ENST00000469585 PURBQ96QR8 312 aaKnown RBP9.83□□□□□ -0.84
PTCD3-208ENST00000469585 ATAD2Q6PL18 1390 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 ERCC6L2Q5T890 1561 aa9.83□□□□□ -0.84
PTCD3-208ENST00000469585 SCARF1Q14162 830 aa9.82□□□□□ -0.84
PTCD3-208ENST00000469585 TAS1R3Q7RTX0 852 aa9.82□□□□□ -0.84
PTCD3-208ENST00000469585 PPARGC1BQ86YN6 1023 aaKnown RBP9.82□□□□□ -0.84
PTCD3-208ENST00000469585 KCTD17Q8N5Z5 321 aa9.82□□□□□ -0.84
PTCD3-208ENST00000469585 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
PTCD3-208ENST00000469585 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
PTCD3-208ENST00000469585 POLMQ9NP87 494 aaPredicted RBP9.82□□□□□ -0.84
PTCD3-208ENST00000469585 DACH1Q9UI36 760 aa9.82□□□□□ -0.84
PTCD3-208ENST00000469585 TBCELQ5QJ74 424 aa9.81□□□□□ -0.84
PTCD3-208ENST00000469585 ZFP42Q96MM3 310 aa9.81□□□□□ -0.84
PTCD3-208ENST00000469585 ATP13A2Q9NQ11 1180 aa9.81□□□□□ -0.84
PTCD3-208ENST00000469585 EFCAB5A4FU69 1503 aa9.81□□□□□ -0.84
PTCD3-208ENST00000469585 UACAQ9BZF9 1416 aa9.81□□□□□ -0.84
PTCD3-208ENST00000469585 SOS2Q07890 1332 aaPredicted RBP9.81□□□□□ -0.84
PTCD3-208ENST00000469585 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
PTCD3-208ENST00000469585 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
PTCD3-208ENST00000469585 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
PTCD3-208ENST00000469585 NBPF15Q8N660 670 aa9.8□□□□□ -0.84
PTCD3-208ENST00000469585 RNF217Q8TC41 542 aa9.8□□□□□ -0.84
PTCD3-208ENST00000469585 DISP1Q96F81 1524 aa9.79□□□□□ -0.84
PTCD3-208ENST00000469585 FOXO3O43524 673 aa9.79□□□□□ -0.84
PTCD3-208ENST00000469585 PSMA6P60900 246 aaKnown RBP9.79□□□□□ -0.84
PTCD3-208ENST00000469585 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
PTCD3-208ENST00000469585 STAG2Q8N3U4 1231 aa9.79□□□□□ -0.84
PTCD3-208ENST00000469585 TTLL8A6PVC2 850 aa9.78□□□□□ -0.84
PTCD3-208ENST00000469585 SPATA31C2B4DYI2 1134 aa9.78□□□□□ -0.84
PTCD3-208ENST00000469585 PPP1R12BO60237 982 aaPredicted RBP9.78□□□□□ -0.84
PTCD3-208ENST00000469585 SCNN1AP37088 669 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms