RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 SLC4A9Q96Q91 983 aa17.7■□□□□ 0.42
LMNA-210ENST00000469565 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
LMNA-210ENST00000469565 KCPQ6ZWJ8 1503 aa17.7■□□□□ 0.42
LMNA-210ENST00000469565 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
LMNA-210ENST00000469565 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
LMNA-210ENST00000469565 CDCA7LQ96GN5 454 aa17.69■□□□□ 0.42
LMNA-210ENST00000469565 MYH16Q9H6N6 1097 aa17.69■□□□□ 0.42
LMNA-210ENST00000469565 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
LMNA-210ENST00000469565 GRIN3BO60391 1043 aa17.68■□□□□ 0.42
LMNA-210ENST00000469565 SNRPA1P09661 255 aaKnown RBP17.68■□□□□ 0.42
LMNA-210ENST00000469565 ITPK1Q13572 414 aa17.68■□□□□ 0.42
LMNA-210ENST00000469565 DNAJC10Q8IXB1 793 aa17.68■□□□□ 0.42
LMNA-210ENST00000469565 TFCP2L1Q9NZI6 479 aa17.68■□□□□ 0.42
LMNA-210ENST00000469565 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 PRAMEF22A3QJZ6 481 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 ELL2O00472 640 aaPredicted RBP17.67■□□□□ 0.42
LMNA-210ENST00000469565 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 NLGN2Q8NFZ4 835 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 ZBED9Q6R2W3 1325 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 PNPLA7Q6ZV29 1317 aa17.67■□□□□ 0.42
LMNA-210ENST00000469565 GOLGB1Q14789 3259 aaKnown RBP17.67■□□□□ 0.42
LMNA-210ENST00000469565 E9PSI1 815 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 C5P01031 1676 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 FANCIQ9NVI1 1328 aa17.66■□□□□ 0.42
LMNA-210ENST00000469565 TJP1Q07157 1748 aa17.65■□□□□ 0.42
LMNA-210ENST00000469565 EIF2S2P20042 333 aaKnown RBP17.65■□□□□ 0.42
LMNA-210ENST00000469565 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
LMNA-210ENST00000469565 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
LMNA-210ENST00000469565 USP16Q9Y5T5 823 aa17.65■□□□□ 0.42
LMNA-210ENST00000469565 STARD3NLO95772 234 aa17.64■□□□□ 0.41
LMNA-210ENST00000469565 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
LMNA-210ENST00000469565 EXOSC9Q06265 439 aaKnown RBP17.64■□□□□ 0.41
LMNA-210ENST00000469565 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
LMNA-210ENST00000469565 NECTIN2Q92692 538 aa17.64■□□□□ 0.41
LMNA-210ENST00000469565 CEP350Q5VT06 3117 aa17.64■□□□□ 0.41
LMNA-210ENST00000469565 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
LMNA-210ENST00000469565 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.41
LMNA-210ENST00000469565 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.41
LMNA-210ENST00000469565 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
LMNA-210ENST00000469565 AK7Q96M32 723 aa17.63■□□□□ 0.41
LMNA-210ENST00000469565 C4BP0C0L5 1744 aa17.62■□□□□ 0.41
LMNA-210ENST00000469565 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
LMNA-210ENST00000469565 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
LMNA-210ENST00000469565 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
LMNA-210ENST00000469565 A1BGP04217 495 aa17.61■□□□□ 0.41
LMNA-210ENST00000469565 CANXP27824 592 aaKnown RBP17.61■□□□□ 0.41
LMNA-210ENST00000469565 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
LMNA-210ENST00000469565 GNPATO15228 680 aa17.6■□□□□ 0.41
LMNA-210ENST00000469565 PIP4K2AP48426 406 aaPredicted RBP17.6■□□□□ 0.41
LMNA-210ENST00000469565 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
LMNA-210ENST00000469565 GPBP1L1Q9HC44 474 aaPredicted RBP17.6■□□□□ 0.41
LMNA-210ENST00000469565 CCDC87Q9NVE4 849 aa17.6■□□□□ 0.41
LMNA-210ENST00000469565 ZNF330Q9Y3S2 320 aaPredicted RBP17.6■□□□□ 0.41
LMNA-210ENST00000469565 TUBGCP6Q96RT7 1819 aa17.6■□□□□ 0.41
LMNA-210ENST00000469565 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
LMNA-210ENST00000469565 MSH5O43196 834 aa17.59■□□□□ 0.41
LMNA-210ENST00000469565 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
LMNA-210ENST00000469565 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
LMNA-210ENST00000469565 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
LMNA-210ENST00000469565 PHF14O94880 888 aa17.58■□□□□ 0.4
LMNA-210ENST00000469565 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
LMNA-210ENST00000469565 SMIM5Q71RC9 77 aa17.58■□□□□ 0.4
LMNA-210ENST00000469565 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
LMNA-210ENST00000469565 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
LMNA-210ENST00000469565 RTCBQ9Y3I0 505 aaKnown RBP17.58■□□□□ 0.4
LMNA-210ENST00000469565 CICQ96RK0 1608 aaPredicted RBP17.58■□□□□ 0.4
LMNA-210ENST00000469565 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
LMNA-210ENST00000469565 HOXB7P09629 217 aa17.57■□□□□ 0.4
LMNA-210ENST00000469565 HSPA6P17066 643 aa17.57■□□□□ 0.4
LMNA-210ENST00000469565 TRMT2AQ8IZ69 625 aaKnown RBP17.57■□□□□ 0.4
LMNA-210ENST00000469565 UBR3Q6ZT12 1888 aa17.56■□□□□ 0.4
LMNA-210ENST00000469565 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
LMNA-210ENST00000469565 MYL6BP14649 208 aa17.56■□□□□ 0.4
LMNA-210ENST00000469565 VAMP4O75379 141 aa17.55■□□□□ 0.4
LMNA-210ENST00000469565 ANXA1P04083 346 aa17.55■□□□□ 0.4
LMNA-210ENST00000469565 CCDC30Q5VVM6 783 aa17.55■□□□□ 0.4
LMNA-210ENST00000469565 COL23A1Q86Y22 540 aaPredicted RBP17.55■□□□□ 0.4
LMNA-210ENST00000469565 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
LMNA-210ENST00000469565 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
LMNA-210ENST00000469565 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
LMNA-210ENST00000469565 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
LMNA-210ENST00000469565 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
LMNA-210ENST00000469565 CACNA1FO60840 1977 aa17.53■□□□□ 0.4
LMNA-210ENST00000469565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.53■□□□□ 0.4
LMNA-210ENST00000469565 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
LMNA-210ENST00000469565 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
LMNA-210ENST00000469565 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
LMNA-210ENST00000469565 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
LMNA-210ENST00000469565 STK31Q9BXU1 1019 aa17.53■□□□□ 0.4
LMNA-210ENST00000469565 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
LMNA-210ENST00000469565 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
LMNA-210ENST00000469565 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
LMNA-210ENST00000469565 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
LMNA-210ENST00000469565 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
LMNA-210ENST00000469565 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
LMNA-210ENST00000469565 SSFA2P28290 1259 aa17.51■□□□□ 0.39
LMNA-210ENST00000469565 RFC4P35249 363 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms