RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 APBB1O00213 710 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 DGKGP49619 791 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
VPS8-219ENST00000469479 PCDHGC4Q9Y5F7 938 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 NDUFB9Q9Y6M9 179 aa9.5□□□□□ -0.89
VPS8-219ENST00000469479 THOC2Q8NI27 1593 aaKnown RBP9.5□□□□□ -0.89
VPS8-219ENST00000469479 USP4Q13107 963 aa9.49□□□□□ -0.89
VPS8-219ENST00000469479 CCDC85AQ96PX6 553 aaPredicted RBP9.49□□□□□ -0.89
VPS8-219ENST00000469479 ATAD2BQ9ULI0 1458 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 NLRP8Q86W28 1048 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 C1orf216Q8TAB5 229 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 ZFP64Q9NPA5 681 aa9.48□□□□□ -0.89
VPS8-219ENST00000469479 GATA4P43694 442 aa9.47□□□□□ -0.89
VPS8-219ENST00000469479 NBPF11Q86T75 865 aa9.47□□□□□ -0.89
VPS8-219ENST00000469479 ZCCHC2Q9C0B9 1178 aaKnown RBP9.47□□□□□ -0.89
VPS8-219ENST00000469479 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
VPS8-219ENST00000469479 GPR37L1O60883 481 aa9.46□□□□□ -0.9
VPS8-219ENST00000469479 ADH6P28332 368 aa9.46□□□□□ -0.9
VPS8-219ENST00000469479 TLR1Q15399 786 aa9.46□□□□□ -0.9
VPS8-219ENST00000469479 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
VPS8-219ENST00000469479 NESP48681 1621 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 ARTNQ5T4W7 220 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 CHSY3Q70JA7 882 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 SIRT1Q96EB6 747 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 PDS5BQ9NTI5 1447 aa9.45□□□□□ -0.9
VPS8-219ENST00000469479 ETNK1Q9HBU6 452 aa9.44□□□□□ -0.9
VPS8-219ENST00000469479 DNAAF2Q9NVR5 837 aaKnown RBP9.44□□□□□ -0.9
VPS8-219ENST00000469479 KRTAP4-8A0A0G2JLE6 195 aa9.43□□□□□ -0.9
VPS8-219ENST00000469479 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
VPS8-219ENST00000469479 PLA2G4AP47712 749 aa9.43□□□□□ -0.9
VPS8-219ENST00000469479 FOXD4L6Q3SYB3 417 aaPredicted RBP9.43□□□□□ -0.9
VPS8-219ENST00000469479 FOXD4L3Q6VB84 417 aaPredicted RBP9.43□□□□□ -0.9
VPS8-219ENST00000469479 DOLKQ9UPQ8 538 aa9.43□□□□□ -0.9
VPS8-219ENST00000469479 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
VPS8-219ENST00000469479 NIFKQ9BYG3 293 aaKnown RBP9.42□□□□□ -0.9
VPS8-219ENST00000469479 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.9
VPS8-219ENST00000469479 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
VPS8-219ENST00000469479 TNP2Q05952 138 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
VPS8-219ENST00000469479 SLFNL1Q499Z3 407 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 AIDAQ96BJ3 306 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 GOLGA2P5Q9HBQ8 144 aa9.4□□□□□ -0.9
VPS8-219ENST00000469479 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
VPS8-219ENST00000469479 ATP4AP20648 1035 aa9.39□□□□□ -0.91
VPS8-219ENST00000469479 KRTAP19-1Q8IUB9 90 aa9.39□□□□□ -0.91
VPS8-219ENST00000469479 IL27Q8NEV9 243 aa9.39□□□□□ -0.91
VPS8-219ENST00000469479 KLF15Q9UIH9 416 aa9.39□□□□□ -0.91
VPS8-219ENST00000469479 A0A1W2PNR3 127 aa9.38□□□□□ -0.91
VPS8-219ENST00000469479 INHAP05111 366 aa9.38□□□□□ -0.91
VPS8-219ENST00000469479 NBPF1Q3BBV0 1214 aa9.38□□□□□ -0.91
VPS8-219ENST00000469479 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
VPS8-219ENST00000469479 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
VPS8-219ENST00000469479 PLVAPQ9BX97 442 aa9.38□□□□□ -0.91
VPS8-219ENST00000469479 SPDYE3A6NKU9 549 aa9.37□□□□□ -0.91
VPS8-219ENST00000469479 STAU1O95793 577 aaKnown RBP9.37□□□□□ -0.91
VPS8-219ENST00000469479 CD33P20138 364 aa9.37□□□□□ -0.91
VPS8-219ENST00000469479 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
VPS8-219ENST00000469479 TRIM11Q96F44 468 aa9.37□□□□□ -0.91
VPS8-219ENST00000469479 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
VPS8-219ENST00000469479 SMARCA4P51532 1647 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 DCDC2BA2VCK2 349 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 KHNYNO15037 678 aaKnown RBP9.36□□□□□ -0.91
VPS8-219ENST00000469479 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
VPS8-219ENST00000469479 SMTNP53814 917 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 GDF10P55107 478 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 NKAPLQ5M9Q1 402 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
VPS8-219ENST00000469479 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
VPS8-219ENST00000469479 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 SCNN1DP51172 638 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 SNRKQ9NRH2 765 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
VPS8-219ENST00000469479 BAZ1AQ9NRL2 1556 aaPredicted RBP9.34□□□□□ -0.91
VPS8-219ENST00000469479 GJA3Q9Y6H8 435 aa9.34□□□□□ -0.91
VPS8-219ENST00000469479 PEG3Q9GZU2 1588 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 ALAS2P22557 587 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 PCBP4P57723 403 aaKnown RBP9.33□□□□□ -0.92
VPS8-219ENST00000469479 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 PRRT3Q5FWE3 981 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 MARK1Q9P0L2 795 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 HCN2Q9UL51 889 aa9.33□□□□□ -0.92
VPS8-219ENST00000469479 WDR62O43379 1518 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 CDK2AP1O14519 115 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 DYRK3O43781 588 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 MAP7D1Q3KQU3 841 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 ZIC5Q96T25 663 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 TPSG1Q9NRR2 321 aa9.32□□□□□ -0.92
VPS8-219ENST00000469479 KIF21AQ7Z4S6 1674 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms