RNA–Protein interactions for RNA: ENST00000469414.1

CIT-204, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-204ENST00000469414 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
CIT-204ENST00000469414 ZEB1P37275 1124 aaPredicted RBP12.87□□□□□ -0.35
CIT-204ENST00000469414 A0A087WZG4 1122 aa12.86□□□□□ -0.35
CIT-204ENST00000469414 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
CIT-204ENST00000469414 TGFB2P61812 414 aa12.86□□□□□ -0.35
CIT-204ENST00000469414 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
CIT-204ENST00000469414 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
CIT-204ENST00000469414 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
CIT-204ENST00000469414 COL24A1Q17RW2 1714 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 COL15A1P39059 1388 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 KCPQ6ZWJ8 1503 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 A1BGP04217 495 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
CIT-204ENST00000469414 MIS18AQ9NYP9 233 aa12.85□□□□□ -0.35
CIT-204ENST00000469414 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
CIT-204ENST00000469414 SNRPA1P09661 255 aaKnown RBP12.84□□□□□ -0.35
CIT-204ENST00000469414 DPEP1P16444 411 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 TM4SF1P30408 202 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 EIF5P55010 431 aaKnown RBP12.84□□□□□ -0.35
CIT-204ENST00000469414 DDR1Q08345 913 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 PLEKHF1Q96S99 279 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 BCS1LQ9Y276 419 aa12.84□□□□□ -0.35
CIT-204ENST00000469414 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
CIT-204ENST00000469414 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
CIT-204ENST00000469414 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
CIT-204ENST00000469414 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
CIT-204ENST00000469414 POLRMTO00411 1230 aaKnown RBP12.82□□□□□ -0.36
CIT-204ENST00000469414 IL6STP40189 918 aaPredicted RBP12.82□□□□□ -0.36
CIT-204ENST00000469414 NFIXQ14938 502 aa12.82□□□□□ -0.36
CIT-204ENST00000469414 THUMPD2Q9BTF0 503 aaKnown RBP12.82□□□□□ -0.36
CIT-204ENST00000469414 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
CIT-204ENST00000469414 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
CIT-204ENST00000469414 TJP1Q07157 1748 aa12.82□□□□□ -0.36
CIT-204ENST00000469414 CICQ96RK0 1608 aaPredicted RBP12.81□□□□□ -0.36
CIT-204ENST00000469414 SERPINB2P05120 415 aa12.81□□□□□ -0.36
CIT-204ENST00000469414 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
CIT-204ENST00000469414 RIPK4P57078 832 aa12.81□□□□□ -0.36
CIT-204ENST00000469414 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
CIT-204ENST00000469414 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
CIT-204ENST00000469414 NPHP1O15259 732 aa12.8□□□□□ -0.36
CIT-204ENST00000469414 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
CIT-204ENST00000469414 DZIP3Q86Y13 1208 aaKnown RBP12.8□□□□□ -0.36
CIT-204ENST00000469414 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
CIT-204ENST00000469414 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
CIT-204ENST00000469414 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
CIT-204ENST00000469414 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
CIT-204ENST00000469414 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
CIT-204ENST00000469414 CHRNA5P30532 468 aa12.79□□□□□ -0.36
CIT-204ENST00000469414 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
CIT-204ENST00000469414 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
CIT-204ENST00000469414 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
CIT-204ENST00000469414 TMPOP42166 694 aaKnown RBP12.78□□□□□ -0.36
CIT-204ENST00000469414 LMOD3Q0VAK6 560 aa12.78□□□□□ -0.36
CIT-204ENST00000469414 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
CIT-204ENST00000469414 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
CIT-204ENST00000469414 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
CIT-204ENST00000469414 KCNA3P22001 575 aa12.77□□□□□ -0.37
CIT-204ENST00000469414 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
CIT-204ENST00000469414 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
CIT-204ENST00000469414 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.37
CIT-204ENST00000469414 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
CIT-204ENST00000469414 UTRNP46939 3433 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 H0YIN7 160 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
CIT-204ENST00000469414 CAMTA2O94983 1202 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 EIF4A1P60842 406 aaKnown RBP12.76□□□□□ -0.37
CIT-204ENST00000469414 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 RUNDC1Q96C34 613 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
CIT-204ENST00000469414 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
CIT-204ENST00000469414 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
CIT-204ENST00000469414 NBPF10Q6P3W6 841 aaKnown RBP12.75□□□□□ -0.37
CIT-204ENST00000469414 NBPF15Q8N660 670 aa12.75□□□□□ -0.37
CIT-204ENST00000469414 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
CIT-204ENST00000469414 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
CIT-204ENST00000469414 CNBD1Q8NA66 436 aa12.74□□□□□ -0.37
CIT-204ENST00000469414 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
CIT-204ENST00000469414 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
CIT-204ENST00000469414 FAM177BA6PVY3 158 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 MYL6BP14649 208 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
CIT-204ENST00000469414 PDE6BP35913 854 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 ST5P78524 1137 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 CLEC4GQ6UXB4 293 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 NBPF5PQ86XG9 351 aaPredicted RBP12.73□□□□□ -0.37
CIT-204ENST00000469414 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
CIT-204ENST00000469414 BRIP1Q9BX63 1249 aa12.73□□□□□ -0.37
CIT-204ENST00000469414 ATP10DQ9P241 1426 aa12.72□□□□□ -0.37
CIT-204ENST00000469414 GTF2E1P29083 439 aaPredicted RBP12.72□□□□□ -0.37
CIT-204ENST00000469414 PRR5LQ6MZQ0 368 aa12.72□□□□□ -0.37
CIT-204ENST00000469414 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
CIT-204ENST00000469414 NIP7Q9Y221 180 aaKnown RBP eCLIP12.72□□□□□ -0.37
CIT-204ENST00000469414 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
CIT-204ENST00000469414 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms