RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PTCD1O75127 700 aaKnown RBP10.46□□□□□ -0.73
HDAC6-216ENST00000468949 ZNF853P0CG23 659 aa10.46□□□□□ -0.73
HDAC6-216ENST00000468949 DUSP27Q5VZP5 1158 aa10.46□□□□□ -0.73
HDAC6-216ENST00000468949 PROM2Q8N271 834 aa10.46□□□□□ -0.73
HDAC6-216ENST00000468949 ZNF831Q5JPB2 1677 aa10.46□□□□□ -0.74
HDAC6-216ENST00000468949 SRCAPQ6ZRS2 3230 aa10.46□□□□□ -0.74
HDAC6-216ENST00000468949 SIPA1L3O60292 1781 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-216ENST00000468949 C4BP0C0L5 1744 aa10.45□□□□□ -0.74
HDAC6-216ENST00000468949 CICQ96RK0 1608 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-216ENST00000468949 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-216ENST00000468949 EXOSC9Q06265 439 aaKnown RBP10.45□□□□□ -0.74
HDAC6-216ENST00000468949 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-216ENST00000468949 ASAP1Q9ULH1 1129 aa10.45□□□□□ -0.74
HDAC6-216ENST00000468949 KDM3BQ7LBC6 1761 aa10.44□□□□□ -0.74
HDAC6-216ENST00000468949 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 ELL2O00472 640 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 SNRPA1P09661 255 aaKnown RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 HMGB2P26583 209 aaKnown RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 EIF4A1P60842 406 aaKnown RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 SLC15A2Q16348 729 aa10.44□□□□□ -0.74
HDAC6-216ENST00000468949 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
HDAC6-216ENST00000468949 ATG3Q9NT62 314 aa10.44□□□□□ -0.74
HDAC6-216ENST00000468949 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-216ENST00000468949 HEG1Q9ULI3 1381 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 KCNQ3O43525 872 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 HOXB7P09629 217 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 ZNF827Q17R98 1081 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
HDAC6-216ENST00000468949 ZNF496Q96IT1 587 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-216ENST00000468949 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-216ENST00000468949 SPON1Q9HCB6 807 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 LRRC4BQ9NT99 713 aa10.43□□□□□ -0.74
HDAC6-216ENST00000468949 COL24A1Q17RW2 1714 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 LOC102724428A0A0B4J2F2 783 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 STARD3NLO95772 234 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
HDAC6-216ENST00000468949 CANXP27824 592 aaKnown RBP10.42□□□□□ -0.74
HDAC6-216ENST00000468949 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 SIK1P57059 783 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 CCDC30Q5VVM6 783 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
HDAC6-216ENST00000468949 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-216ENST00000468949 KRT24Q2M2I5 525 aa10.41□□□□□ -0.74
HDAC6-216ENST00000468949 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
HDAC6-216ENST00000468949 C8orf58Q8NAV2 365 aa10.41□□□□□ -0.74
HDAC6-216ENST00000468949 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
HDAC6-216ENST00000468949 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
HDAC6-216ENST00000468949 SMC4Q9NTJ3 1288 aa10.41□□□□□ -0.74
HDAC6-216ENST00000468949 UBR3Q6ZT12 1888 aa10.4□□□□□ -0.74
HDAC6-216ENST00000468949 UBR2Q8IWV8 1755 aa10.4□□□□□ -0.74
HDAC6-216ENST00000468949 GIGYF1O75420 1035 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-216ENST00000468949 TSPYL6Q8N831 410 aa10.4□□□□□ -0.74
HDAC6-216ENST00000468949 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-216ENST00000468949 RCAN3Q9UKA8 241 aa10.4□□□□□ -0.74
HDAC6-216ENST00000468949 TJP1Q07157 1748 aa10.4□□□□□ -0.74
HDAC6-216ENST00000468949 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 KIF16BQ96L93 1317 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 KCNQ4P56696 695 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 DNAJC10Q8IXB1 793 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-216ENST00000468949 PDGFDQ9GZP0 370 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-216ENST00000468949 MTFR1LQ9H019 292 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 RTN4Q9NQC3 1192 aaKnown RBP10.39□□□□□ -0.75
HDAC6-216ENST00000468949 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
HDAC6-216ENST00000468949 ZNF330Q9Y3S2 320 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-216ENST00000468949 PNPLA7Q6ZV29 1317 aa10.38□□□□□ -0.75
HDAC6-216ENST00000468949 VAMP4O75379 141 aa10.38□□□□□ -0.75
HDAC6-216ENST00000468949 ALDH1L2Q3SY69 923 aa10.38□□□□□ -0.75
HDAC6-216ENST00000468949 AK7Q96M32 723 aa10.38□□□□□ -0.75
HDAC6-216ENST00000468949 BCL2L13Q9BXK5 485 aa10.38□□□□□ -0.75
HDAC6-216ENST00000468949 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-216ENST00000468949 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 PRAMEF22A3QJZ6 481 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 TCERG1O14776 1098 aaKnown RBP10.37□□□□□ -0.75
HDAC6-216ENST00000468949 MYL6BP14649 208 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
HDAC6-216ENST00000468949 C4AP0C0L4 1744 aa10.36□□□□□ -0.75
HDAC6-216ENST00000468949 CRKLP46109 303 aaKnown RBP10.36□□□□□ -0.75
HDAC6-216ENST00000468949 RARSP54136 660 aaKnown RBP10.36□□□□□ -0.75
HDAC6-216ENST00000468949 FRAT1Q92837 279 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-216ENST00000468949 ARXQ96QS3 562 aa10.36□□□□□ -0.75
HDAC6-216ENST00000468949 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
HDAC6-216ENST00000468949 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
HDAC6-216ENST00000468949 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
HDAC6-216ENST00000468949 CNTNAP4Q9C0A0 1308 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
HDAC6-216ENST00000468949 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
HDAC6-216ENST00000468949 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-216ENST00000468949 PTGER2P43116 358 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 ITPK1Q13572 414 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 KIF6Q6ZMV9 814 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 FLAD1Q8NFF5 587 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 SSH1Q8WYL5 1049 aa10.35□□□□□ -0.75
HDAC6-216ENST00000468949 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms