RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
RPL39-202ENST00000468844 CHPF2Q9P2E5 772 aa22.41■■□□□ 1.18
RPL39-202ENST00000468844 NOB1Q9ULX3 412 aaKnown RBP22.41■■□□□ 1.18
RPL39-202ENST00000468844 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
RPL39-202ENST00000468844 CHMP4AQ9BY43 222 aa22.4■■□□□ 1.18
RPL39-202ENST00000468844 BCL11BQ9C0K0 894 aaPredicted RBP22.4■■□□□ 1.18
RPL39-202ENST00000468844 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.18
RPL39-202ENST00000468844 C20orf194Q5TEA3 1177 aa22.39■■□□□ 1.18
RPL39-202ENST00000468844 SMARCC1Q92922 1105 aaPredicted RBP22.39■■□□□ 1.18
RPL39-202ENST00000468844 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
RPL39-202ENST00000468844 ANXA1P04083 346 aa22.38■■□□□ 1.17
RPL39-202ENST00000468844 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
RPL39-202ENST00000468844 G2E3Q7L622 706 aa22.38■■□□□ 1.17
RPL39-202ENST00000468844 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
RPL39-202ENST00000468844 RREB1Q92766 1687 aa22.38■■□□□ 1.17
RPL39-202ENST00000468844 LOC102724428A0A0B4J2F2 783 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 TRIM27P14373 513 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 SIK1P57059 783 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 PDIA6Q15084 440 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 PROSER3Q2NL68 480 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 DNAJC10Q8IXB1 793 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 TRIM37O94972 964 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 NEFLP07196 543 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
RPL39-202ENST00000468844 TEX13AQ9BXU3 409 aaPredicted RBP22.35■■□□□ 1.17
RPL39-202ENST00000468844 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
RPL39-202ENST00000468844 DDX21Q9NR30 783 aaKnown RBP eCLIP22.35■■□□□ 1.171e-46■□□□□ 10.1
RPL39-202ENST00000468844 ATP6V1AP38606 617 aa22.35■■□□□ 1.17
RPL39-202ENST00000468844 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
RPL39-202ENST00000468844 FLIIQ13045 1269 aa22.35■■□□□ 1.17
RPL39-202ENST00000468844 ARHGAP45Q92619 1136 aa22.35■■□□□ 1.17
RPL39-202ENST00000468844 ARFGEF2Q9Y6D5 1785 aa22.34■■□□□ 1.17
RPL39-202ENST00000468844 IPO8O15397 1037 aaKnown RBP22.34■■□□□ 1.17
RPL39-202ENST00000468844 CLUAP1Q96AJ1 413 aa22.34■■□□□ 1.17
RPL39-202ENST00000468844 PTPRCP08575 1304 aa22.34■■□□□ 1.17
RPL39-202ENST00000468844 RLBP1P12271 317 aa22.33■■□□□ 1.17
RPL39-202ENST00000468844 FKBP8Q14318 412 aa22.33■■□□□ 1.17
RPL39-202ENST00000468844 RGPD3A6NKT7 1758 aaPredicted RBP22.33■■□□□ 1.17
RPL39-202ENST00000468844 RGPD4Q7Z3J3 1758 aa22.33■■□□□ 1.17
RPL39-202ENST00000468844 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 ITPK1Q13572 414 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 PDE3AQ14432 1141 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 LRP10Q7Z4F1 713 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 PANK1Q8TE04 598 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 ERBB4Q15303 1308 aa22.33■■□□□ 1.16
RPL39-202ENST00000468844 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
RPL39-202ENST00000468844 A1BGP04217 495 aa22.32■■□□□ 1.16
RPL39-202ENST00000468844 CYP19A1P11511 503 aaPredicted RBP22.32■■□□□ 1.16
RPL39-202ENST00000468844 MYL6BP14649 208 aa22.32■■□□□ 1.16
RPL39-202ENST00000468844 NBPF14Q5TI25 921 aa22.32■■□□□ 1.16
RPL39-202ENST00000468844 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
RPL39-202ENST00000468844 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
RPL39-202ENST00000468844 STARD3NLO95772 234 aa22.31■■□□□ 1.16
RPL39-202ENST00000468844 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
RPL39-202ENST00000468844 DZIP1LQ8IYY4 767 aaKnown RBP22.31■■□□□ 1.16
RPL39-202ENST00000468844 FKBP5Q13451 457 aaPredicted RBP22.3■■□□□ 1.16
RPL39-202ENST00000468844 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
RPL39-202ENST00000468844 ABCC4O15439 1325 aa22.29■■□□□ 1.16
RPL39-202ENST00000468844 KCNQ4P56696 695 aa22.29■■□□□ 1.16
RPL39-202ENST00000468844 API5Q9BZZ5 524 aaKnown RBP22.29■■□□□ 1.16
RPL39-202ENST00000468844 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
RPL39-202ENST00000468844 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
RPL39-202ENST00000468844 NUP98P52948 1817 aa22.28■■□□□ 1.16
RPL39-202ENST00000468844 CRBNQ96SW2 442 aa22.27■■□□□ 1.16
RPL39-202ENST00000468844 CCNL1Q9UK58 526 aaPredicted RBP22.27■■□□□ 1.16
RPL39-202ENST00000468844 ZBTB1Q9Y2K1 713 aa22.27■■□□□ 1.16
RPL39-202ENST00000468844 F6X3S4 739 aa22.27■■□□□ 1.16
RPL39-202ENST00000468844 MS4A1P11836 297 aa22.27■■□□□ 1.16
RPL39-202ENST00000468844 COG6Q9Y2V7 657 aa22.27■■□□□ 1.16
RPL39-202ENST00000468844 TMEM57Q8N5G2 664 aa22.26■■□□□ 1.15
RPL39-202ENST00000468844 LINC00116Q8NCU8 138 aa22.26■■□□□ 1.15
RPL39-202ENST00000468844 UBR3Q6ZT12 1888 aa22.26■■□□□ 1.15
RPL39-202ENST00000468844 ADCY9O60503 1353 aa22.26■■□□□ 1.15
RPL39-202ENST00000468844 CRKLP46109 303 aaKnown RBP22.25■■□□□ 1.15
RPL39-202ENST00000468844 AIMP1Q12904 312 aaKnown RBP22.25■■□□□ 1.15
RPL39-202ENST00000468844 EXOC6Q8TAG9 804 aa22.25■■□□□ 1.15
RPL39-202ENST00000468844 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
RPL39-202ENST00000468844 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
RPL39-202ENST00000468844 COPS6Q7L5N1 327 aa22.25■■□□□ 1.15
RPL39-202ENST00000468844 ANKRD36CQ5JPF3 1778 aa22.24■■□□□ 1.15
RPL39-202ENST00000468844 PI4KAP2A4QPH2 592 aa22.24■■□□□ 1.15
RPL39-202ENST00000468844 INTS5Q6P9B9 1019 aaKnown RBP22.24■■□□□ 1.15
RPL39-202ENST00000468844 PI4KAP1Q8N8J0 262 aa22.24■■□□□ 1.15
RPL39-202ENST00000468844 LRRC4BQ9NT99 713 aa22.23■■□□□ 1.15
RPL39-202ENST00000468844 MVPQ14764 893 aaKnown RBP22.23■■□□□ 1.15
RPL39-202ENST00000468844 CCDC87Q9NVE4 849 aa22.23■■□□□ 1.15
RPL39-202ENST00000468844 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
RPL39-202ENST00000468844 PLSCR1O15162 318 aa22.22■■□□□ 1.15
RPL39-202ENST00000468844 APBA3O96018 575 aa22.22■■□□□ 1.15
RPL39-202ENST00000468844 C4AP0C0L4 1744 aa22.22■■□□□ 1.15
RPL39-202ENST00000468844 ITPRIPQ8IWB1 547 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 ZNF330Q9Y3S2 320 aaPredicted RBP22.21■■□□□ 1.15
RPL39-202ENST00000468844 CNTNAP4Q9C0A0 1308 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 TUBGCP6Q96RT7 1819 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 IL6STP40189 918 aaPredicted RBP22.21■■□□□ 1.15
RPL39-202ENST00000468844 SLC4A10Q6U841 1118 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 KSR2Q6VAB6 950 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
RPL39-202ENST00000468844 DDX58O95786 925 aaKnown RBP22.2■■□□□ 1.14
RPL39-202ENST00000468844 INTS3Q68E01 1043 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms