RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 TTLL6Q8N841 843 aa15.61■□□□□ 0.09
NEDD9-207ENST00000468612 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
NEDD9-207ENST00000468612 NRXN2Q9P2S2 1712 aa15.59■□□□□ 0.09
NEDD9-207ENST00000468612 AFDNP55196 1824 aaKnown RBP15.58■□□□□ 0.08
NEDD9-207ENST00000468612 KIF20BQ96Q89 1820 aa15.58■□□□□ 0.08
NEDD9-207ENST00000468612 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
NEDD9-207ENST00000468612 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
NEDD9-207ENST00000468612 ANKRD26Q9UPS8 1709 aa15.57■□□□□ 0.08
NEDD9-207ENST00000468612 DICER1Q9UPY3 1922 aaKnown RBP15.57■□□□□ 0.08
NEDD9-207ENST00000468612 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
NEDD9-207ENST00000468612 ERFEQ4G0M1 354 aa15.57■□□□□ 0.08
NEDD9-207ENST00000468612 CCDC85CA6NKD9 419 aa15.56■□□□□ 0.08
NEDD9-207ENST00000468612 PTCD1O75127 700 aaKnown RBP15.56■□□□□ 0.08
NEDD9-207ENST00000468612 USPL1Q5W0Q7 1092 aa15.56■□□□□ 0.08
NEDD9-207ENST00000468612 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
NEDD9-207ENST00000468612 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
NEDD9-207ENST00000468612 TJP1Q07157 1748 aa15.56■□□□□ 0.08
NEDD9-207ENST00000468612 ST20-MTHFSA0A0A6YYL1 179 aa15.55■□□□□ 0.08
NEDD9-207ENST00000468612 DDNO94850 711 aaPredicted RBP15.55■□□□□ 0.08
NEDD9-207ENST00000468612 ITGBL1O95965 494 aaPredicted RBP15.55■□□□□ 0.08
NEDD9-207ENST00000468612 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
NEDD9-207ENST00000468612 NFIXQ14938 502 aa15.55■□□□□ 0.08
NEDD9-207ENST00000468612 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
NEDD9-207ENST00000468612 RASSF10A6NK89 507 aa15.54■□□□□ 0.08
NEDD9-207ENST00000468612 PPM1GO15355 546 aaPredicted RBP15.54■□□□□ 0.08
NEDD9-207ENST00000468612 SLC24A1O60721 1099 aa15.54■□□□□ 0.08
NEDD9-207ENST00000468612 ZPR1O75312 459 aa15.54■□□□□ 0.08
NEDD9-207ENST00000468612 FER1L6Q2WGJ9 1857 aa15.53■□□□□ 0.08
NEDD9-207ENST00000468612 SOS1Q07889 1333 aaPredicted RBP15.53■□□□□ 0.08
NEDD9-207ENST00000468612 CABP4P57796 275 aa15.53■□□□□ 0.08
NEDD9-207ENST00000468612 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
NEDD9-207ENST00000468612 CARMIL3Q8ND23 1372 aa15.52■□□□□ 0.08
NEDD9-207ENST00000468612 LTBP3Q9NS15 1303 aa15.52■□□□□ 0.08
NEDD9-207ENST00000468612 H0YIN7 160 aa15.52■□□□□ 0.08
NEDD9-207ENST00000468612 SERPINB2P05120 415 aa15.52■□□□□ 0.08
NEDD9-207ENST00000468612 TAF1DQ9H5J8 278 aaPredicted RBP15.52■□□□□ 0.08
NEDD9-207ENST00000468612 IQCA1LA6NCM1 817 aa15.51■□□□□ 0.07
NEDD9-207ENST00000468612 DEFB115Q30KQ5 88 aa15.51■□□□□ 0.07
NEDD9-207ENST00000468612 L3MBTL3Q96JM7 780 aaPredicted RBP15.51■□□□□ 0.07
NEDD9-207ENST00000468612 BCL2L12Q9HB09 334 aa15.51■□□□□ 0.07
NEDD9-207ENST00000468612 NARFQ9UHQ1 456 aa15.51■□□□□ 0.07
NEDD9-207ENST00000468612 WDR33Q9C0J8 1336 aaKnown RBP15.5■□□□□ 0.07
NEDD9-207ENST00000468612 C21orf2O43822 256 aa15.5■□□□□ 0.07
NEDD9-207ENST00000468612 SCN4AP35499 1836 aa15.5■□□□□ 0.07
NEDD9-207ENST00000468612 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
NEDD9-207ENST00000468612 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
NEDD9-207ENST00000468612 THSD7BQ9C0I4 1608 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 ZNF530Q6P9A1 599 aaPredicted RBP15.48■□□□□ 0.07
NEDD9-207ENST00000468612 NFATC2IPQ8NCF5 419 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
NEDD9-207ENST00000468612 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 ADAMTSL1Q8N6G6 1762 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 COL15A1P39059 1388 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 PDE4DIPQ5VU43 2346 aa15.48■□□□□ 0.07
NEDD9-207ENST00000468612 PLEKHO1Q53GL0 409 aaPredicted RBP15.47■□□□□ 0.07
NEDD9-207ENST00000468612 DNAJC10Q8IXB1 793 aa15.47■□□□□ 0.07
NEDD9-207ENST00000468612 ANKRD31Q8N7Z5 1873 aa15.47■□□□□ 0.07
NEDD9-207ENST00000468612 ZNF622Q969S3 477 aaKnown RBP eCLIP15.47■□□□□ 0.07
NEDD9-207ENST00000468612 PDZRN3Q9UPQ7 1066 aa15.47■□□□□ 0.07
NEDD9-207ENST00000468612 MTHFSP49914 203 aa15.46■□□□□ 0.07
NEDD9-207ENST00000468612 COL11A2P13942 1736 aaPredicted RBP15.46■□□□□ 0.06
NEDD9-207ENST00000468612 CYP19A1P11511 503 aaPredicted RBP15.45■□□□□ 0.06
NEDD9-207ENST00000468612 AMOTQ4VCS5 1084 aa15.45■□□□□ 0.06
NEDD9-207ENST00000468612 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
NEDD9-207ENST00000468612 CNTROBQ8N137 903 aa15.44■□□□□ 0.06
NEDD9-207ENST00000468612 BRIP1Q9BX63 1249 aa15.44■□□□□ 0.06
NEDD9-207ENST00000468612 ZBTB1Q9Y2K1 713 aa15.44■□□□□ 0.06
NEDD9-207ENST00000468612 PDE6BP35913 854 aa15.43■□□□□ 0.06
NEDD9-207ENST00000468612 HACL1Q9UJ83 578 aa15.43■□□□□ 0.06
NEDD9-207ENST00000468612 MAP1SQ66K74 1059 aaPredicted RBP15.42■□□□□ 0.06
NEDD9-207ENST00000468612 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
NEDD9-207ENST00000468612 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
NEDD9-207ENST00000468612 SLX4Q8IY92 1834 aa15.42■□□□□ 0.06
NEDD9-207ENST00000468612 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
NEDD9-207ENST00000468612 EPHX2P34913 555 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 C1orf141Q5JVX7 400 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 CAPNS2Q96L46 248 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 BEGAINQ9BUH8 593 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 MCOLN1Q9GZU1 580 aa15.41■□□□□ 0.06
NEDD9-207ENST00000468612 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
NEDD9-207ENST00000468612 PRR5LQ6MZQ0 368 aa15.4■□□□□ 0.06
NEDD9-207ENST00000468612 PRPF40BQ6NWY9 871 aaKnown RBP15.4■□□□□ 0.06
NEDD9-207ENST00000468612 BICDL1Q6ZP65 573 aa15.4■□□□□ 0.06
NEDD9-207ENST00000468612 PNMA8AQ86V59 439 aaPredicted RBP15.4■□□□□ 0.06
NEDD9-207ENST00000468612 CNKSR1Q969H4 720 aa15.4■□□□□ 0.06
NEDD9-207ENST00000468612 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
NEDD9-207ENST00000468612 ECE1P42892 770 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 STYK1Q6J9G0 422 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 CCDC24Q8N4L8 307 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 GPR101Q96P66 508 aaPredicted RBP15.39■□□□□ 0.05
NEDD9-207ENST00000468612 DDX21Q9NR30 783 aaKnown RBP eCLIP15.39■□□□□ 0.05
NEDD9-207ENST00000468612 TSKSQ9UJT2 592 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
NEDD9-207ENST00000468612 CYP4F22Q6NT55 531 aa15.38■□□□□ 0.05
NEDD9-207ENST00000468612 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
NEDD9-207ENST00000468612 SRGNP10124 158 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms