RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 HCN2Q9UL51 889 aa8.5□□□□□ -1.05
SSB-208ENST00000468600 SOCS7O14512 581 aa8.49□□□□□ -1.05
SSB-208ENST00000468600 PRSS36Q5K4E3 855 aa8.49□□□□□ -1.05
SSB-208ENST00000468600 FIGNL1Q6PIW4 674 aa8.49□□□□□ -1.05
SSB-208ENST00000468600 FCHSD1Q86WN1 690 aa8.49□□□□□ -1.05
SSB-208ENST00000468600 BANK1Q8NDB2 785 aa8.48□□□□□ -1.05
SSB-208ENST00000468600 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
SSB-208ENST00000468600 CDCA7Q9BWT1 371 aaPredicted RBP8.48□□□□□ -1.05
SSB-208ENST00000468600 CRISPLD1Q9H336 500 aa8.48□□□□□ -1.05
SSB-208ENST00000468600 TLR1Q15399 786 aa8.47□□□□□ -1.05
SSB-208ENST00000468600 TBC1D9Q6ZT07 1266 aa8.47□□□□□ -1.05
SSB-208ENST00000468600 DNAAF2Q9NVR5 837 aaKnown RBP8.47□□□□□ -1.05
SSB-208ENST00000468600 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
SSB-208ENST00000468600 CEP126Q9P2H0 1117 aa8.46□□□□□ -1.06
SSB-208ENST00000468600 GPR37L1O60883 481 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 ADH6P28332 368 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 PLA2G4AP47712 749 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 LRP8Q14114 963 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 DOLKQ9UPQ8 538 aa8.45□□□□□ -1.06
SSB-208ENST00000468600 USP4Q13107 963 aa8.44□□□□□ -1.06
SSB-208ENST00000468600 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
SSB-208ENST00000468600 KRTAP4-7Q9BYR0 210 aa8.44□□□□□ -1.06
SSB-208ENST00000468600 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
SSB-208ENST00000468600 PCDHGC4Q9Y5F7 938 aa8.44□□□□□ -1.06
SSB-208ENST00000468600 C1orf216Q8TAB5 229 aa8.43□□□□□ -1.06
SSB-208ENST00000468600 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
SSB-208ENST00000468600 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
SSB-208ENST00000468600 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
SSB-208ENST00000468600 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
SSB-208ENST00000468600 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
SSB-208ENST00000468600 ZCCHC2Q9C0B9 1178 aaKnown RBP8.42□□□□□ -1.06
SSB-208ENST00000468600 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
SSB-208ENST00000468600 AVENQ9NQS1 362 aaPredicted RBP8.41□□□□□ -1.06
SSB-208ENST00000468600 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
SSB-208ENST00000468600 HYAL3O43820 417 aaPredicted RBP8.4□□□□□ -1.06
SSB-208ENST00000468600 OXLD1Q5BKU9 147 aa8.4□□□□□ -1.06
SSB-208ENST00000468600 FAM182BQ5T319 152 aa8.4□□□□□ -1.06
SSB-208ENST00000468600 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
SSB-208ENST00000468600 NIFKQ9BYG3 293 aaKnown RBP8.4□□□□□ -1.06
SSB-208ENST00000468600 DCDC2BA2VCK2 349 aa8.39□□□□□ -1.07
SSB-208ENST00000468600 STAU1O95793 577 aaKnown RBP8.39□□□□□ -1.07
SSB-208ENST00000468600 CD33P20138 364 aa8.39□□□□□ -1.07
SSB-208ENST00000468600 ATP4AP20648 1035 aa8.39□□□□□ -1.07
SSB-208ENST00000468600 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
SSB-208ENST00000468600 PCBP4P57723 403 aaKnown RBP8.38□□□□□ -1.07
SSB-208ENST00000468600 ARSJQ5FYB0 599 aaPredicted RBP8.38□□□□□ -1.07
SSB-208ENST00000468600 LCE1DQ5T752 114 aa8.38□□□□□ -1.07
SSB-208ENST00000468600 PRM3Q9NNZ6 103 aa8.38□□□□□ -1.07
SSB-208ENST00000468600 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
SSB-208ENST00000468600 APBA3O96018 575 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 MAPTP10636 758 aaKnown RBP8.37□□□□□ -1.07
SSB-208ENST00000468600 GDF10P55107 478 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 TNP2Q05952 138 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 PRRT3Q5FWE3 981 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 MDFIQ99750 246 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 SNRKQ9NRH2 765 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
SSB-208ENST00000468600 INHAP05111 366 aa8.36□□□□□ -1.07
SSB-208ENST00000468600 TATP17735 454 aaPredicted RBP8.36□□□□□ -1.07
SSB-208ENST00000468600 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
SSB-208ENST00000468600 ZNF468Q5VIY5 522 aaPredicted RBP8.36□□□□□ -1.07
SSB-208ENST00000468600 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SSB-208ENST00000468600 A0A1W2PNR3 127 aa8.35□□□□□ -1.07
SSB-208ENST00000468600 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
SSB-208ENST00000468600 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
SSB-208ENST00000468600 PHTF2Q8N3S3 785 aa8.35□□□□□ -1.07
SSB-208ENST00000468600 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
SSB-208ENST00000468600 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
SSB-208ENST00000468600 SCNN1DP51172 638 aa8.34□□□□□ -1.07
SSB-208ENST00000468600 MCTP1Q6DN14 999 aa8.34□□□□□ -1.07
SSB-208ENST00000468600 TBC1D2BQ9UPU7 963 aa8.34□□□□□ -1.07
SSB-208ENST00000468600 FAM157BP0CG42 384 aa8.33□□□□□ -1.08
SSB-208ENST00000468600 SMTNP53814 917 aa8.33□□□□□ -1.08
SSB-208ENST00000468600 ZDHHC3Q9NYG2 299 aa8.33□□□□□ -1.08
SSB-208ENST00000468600 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
SSB-208ENST00000468600 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
SSB-208ENST00000468600 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
SSB-208ENST00000468600 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
SSB-208ENST00000468600 MAP7D1Q3KQU3 841 aa8.31□□□□□ -1.08
SSB-208ENST00000468600 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
SSB-208ENST00000468600 MARK1Q9P0L2 795 aa8.31□□□□□ -1.08
SSB-208ENST00000468600 CHIC2Q9UKJ5 165 aa8.31□□□□□ -1.08
SSB-208ENST00000468600 ALAS2P22557 587 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 GRIK4Q16099 956 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 SAMD5Q5TGI4 173 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 NACC1Q96RE7 527 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
SSB-208ENST00000468600 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
SSB-208ENST00000468600 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
SSB-208ENST00000468600 A6NJY4 79 aa8.28□□□□□ -1.08
SSB-208ENST00000468600 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
SSB-208ENST00000468600 PRDM6Q9NQX0 595 aa8.28□□□□□ -1.08
SSB-208ENST00000468600 M0R082 166 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 CDK2AP1O14519 115 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 ADGRE1Q14246 886 aa8.27□□□□□ -1.09
SSB-208ENST00000468600 MBTPS1Q14703 1052 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 271.9 ms