RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
SEC16A-208ENST00000467838 SSH3Q8TE77 659 aa17.59■□□□□ 0.41
SEC16A-208ENST00000467838 MED1Q15648 1581 aaPredicted RBP17.59■□□□□ 0.41
SEC16A-208ENST00000467838 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
SEC16A-208ENST00000467838 FKBP5Q13451 457 aaPredicted RBP17.59■□□□□ 0.41
SEC16A-208ENST00000467838 TSPY26PQ9H489 355 aa17.59■□□□□ 0.41
SEC16A-208ENST00000467838 WDR33Q9C0J8 1336 aaKnown RBP17.58■□□□□ 0.4
SEC16A-208ENST00000467838 PHF14O94880 888 aa17.58■□□□□ 0.4
SEC16A-208ENST00000467838 KLHL34Q8N239 644 aa17.58■□□□□ 0.4
SEC16A-208ENST00000467838 LRRFIP2Q9Y608 721 aaKnown RBP17.58■□□□□ 0.4
SEC16A-208ENST00000467838 MAP3K5Q99683 1374 aa17.58■□□□□ 0.4
SEC16A-208ENST00000467838 RAD50Q92878 1312 aa17.57■□□□□ 0.4
SEC16A-208ENST00000467838 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
SEC16A-208ENST00000467838 RAB11FIP3O75154 756 aa17.57■□□□□ 0.4
SEC16A-208ENST00000467838 POLA2Q14181 598 aa17.57■□□□□ 0.4
SEC16A-208ENST00000467838 USP44Q9H0E7 712 aa17.57■□□□□ 0.4
SEC16A-208ENST00000467838 GNAT3A8MTJ3 354 aa17.56■□□□□ 0.4
SEC16A-208ENST00000467838 TRIM6-TRIM34B2RNG4 842 aa17.56■□□□□ 0.4
SEC16A-208ENST00000467838 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
SEC16A-208ENST00000467838 RGPD8O14715 1765 aaPredicted RBP17.56■□□□□ 0.4
SEC16A-208ENST00000467838 HSPA2P54652 639 aa17.55■□□□□ 0.4
SEC16A-208ENST00000467838 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
SEC16A-208ENST00000467838 FAM184AQ8NB25 1140 aa17.55■□□□□ 0.4
SEC16A-208ENST00000467838 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
SEC16A-208ENST00000467838 IL25Q9H293 177 aa17.55■□□□□ 0.4
SEC16A-208ENST00000467838 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
SEC16A-208ENST00000467838 TTC14Q96N46 770 aa17.55■□□□□ 0.4
SEC16A-208ENST00000467838 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
SEC16A-208ENST00000467838 KDM3BQ7LBC6 1761 aa17.54■□□□□ 0.4
SEC16A-208ENST00000467838 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
SEC16A-208ENST00000467838 XPCQ01831 940 aaPredicted RBP17.54■□□□□ 0.4
SEC16A-208ENST00000467838 UVSSAQ2YD98 709 aa17.54■□□□□ 0.4
SEC16A-208ENST00000467838 UPF3BQ9BZI7 483 aaKnown RBP17.54■□□□□ 0.4
SEC16A-208ENST00000467838 TCHHQ07283 1943 aa17.54■□□□□ 0.4
SEC16A-208ENST00000467838 ANKARQ7Z5J8 1434 aa17.54■□□□□ 0.4
SEC16A-208ENST00000467838 SGSM2O43147 1006 aa17.53■□□□□ 0.4
SEC16A-208ENST00000467838 MAP7D2Q96T17 732 aa17.53■□□□□ 0.4
SEC16A-208ENST00000467838 R3HCC1Q9Y3T6 440 aaKnown RBP17.53■□□□□ 0.4
SEC16A-208ENST00000467838 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.4
SEC16A-208ENST00000467838 AMPHP49418 695 aa17.52■□□□□ 0.4
SEC16A-208ENST00000467838 USP48Q86UV5 1035 aa17.52■□□□□ 0.4
SEC16A-208ENST00000467838 GADD45BO75293 160 aaPredicted RBP17.51■□□□□ 0.39
SEC16A-208ENST00000467838 IL17REQ8NFR9 667 aa17.51■□□□□ 0.39
SEC16A-208ENST00000467838 LSG1Q9H089 658 aaKnown RBP17.51■□□□□ 0.39
SEC16A-208ENST00000467838 CEMIPQ8WUJ3 1361 aa17.51■□□□□ 0.39
SEC16A-208ENST00000467838 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
SEC16A-208ENST00000467838 TAF7Q15545 349 aaPredicted RBP17.51■□□□□ 0.39
SEC16A-208ENST00000467838 RNF214Q8ND24 703 aa17.51■□□□□ 0.39
SEC16A-208ENST00000467838 DYNC1I1O14576 645 aa17.5■□□□□ 0.39
SEC16A-208ENST00000467838 SOX12O15370 315 aa17.5■□□□□ 0.39
SEC16A-208ENST00000467838 CCDC183Q5T5S1 534 aa17.5■□□□□ 0.39
SEC16A-208ENST00000467838 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
SEC16A-208ENST00000467838 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
SEC16A-208ENST00000467838 HOXC9P31274 260 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 NOL8Q76FK4 1167 aaKnown RBP17.49■□□□□ 0.39
SEC16A-208ENST00000467838 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 KIF1BPQ96EK5 621 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 UQCRHLA0A096LP55 91 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 LETM1O95202 739 aaPredicted RBP17.49■□□□□ 0.39
SEC16A-208ENST00000467838 UQCRHP07919 91 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 HOXB7P09629 217 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 ZSCAN22P10073 491 aaPredicted RBP17.49■□□□□ 0.39
SEC16A-208ENST00000467838 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
SEC16A-208ENST00000467838 RBM33Q96EV2 1170 aaKnown RBP17.48■□□□□ 0.39
SEC16A-208ENST00000467838 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
SEC16A-208ENST00000467838 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
SEC16A-208ENST00000467838 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
SEC16A-208ENST00000467838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.48■□□□□ 0.394e-8■■□□□ 11.8
SEC16A-208ENST00000467838 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 UBE2HP62256 183 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 HDGFL1Q5TGJ6 251 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
SEC16A-208ENST00000467838 RUFY3Q7L099 469 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
SEC16A-208ENST00000467838 KCNB2Q92953 911 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.46■□□□□ 0.39
SEC16A-208ENST00000467838 SURF6O75683 361 aaKnown RBP17.46■□□□□ 0.39
SEC16A-208ENST00000467838 AK2P54819 239 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 NGDNQ8NEJ9 315 aaKnown RBP17.46■□□□□ 0.39
SEC16A-208ENST00000467838 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
SEC16A-208ENST00000467838 LTN1O94822 1766 aa17.45■□□□□ 0.38
SEC16A-208ENST00000467838 STX6O43752 255 aa17.45■□□□□ 0.38
SEC16A-208ENST00000467838 F13A1P00488 732 aa17.45■□□□□ 0.38
SEC16A-208ENST00000467838 MTX1Q13505 466 aa17.45■□□□□ 0.38
SEC16A-208ENST00000467838 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
SEC16A-208ENST00000467838 PHRF1Q9P1Y6 1649 aaKnown RBP17.45■□□□□ 0.38
SEC16A-208ENST00000467838 SYT1P21579 422 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 BEND3Q5T5X7 828 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 PHAXQ9H814 394 aaKnown RBP17.44■□□□□ 0.38
SEC16A-208ENST00000467838 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 ATP6V1DQ9Y5K8 247 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 ADGRL3Q9HAR2 1447 aa17.44■□□□□ 0.38
SEC16A-208ENST00000467838 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
SEC16A-208ENST00000467838 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms