RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PELP1Q8IZL8 1130 aaKnown RBP24.03■■□□□ 1.44
CGREF1-208ENST00000467539 PRKRIP1Q9H875 184 aaPredicted RBP24.03■■□□□ 1.44
CGREF1-208ENST00000467539 NARFQ9UHQ1 456 aa24.03■■□□□ 1.44
CGREF1-208ENST00000467539 PARP3Q9Y6F1 533 aa24.03■■□□□ 1.44
CGREF1-208ENST00000467539 UTRNP46939 3433 aa24.03■■□□□ 1.44
CGREF1-208ENST00000467539 SIPA1L3O60292 1781 aaPredicted RBP24.02■■□□□ 1.44
CGREF1-208ENST00000467539 UBR2Q8IWV8 1755 aa24.02■■□□□ 1.44
CGREF1-208ENST00000467539 GRIN3BO60391 1043 aa24.02■■□□□ 1.44
CGREF1-208ENST00000467539 TM4SF1P30408 202 aa24.02■■□□□ 1.44
CGREF1-208ENST00000467539 EIF5P55010 431 aaKnown RBP24.02■■□□□ 1.44
CGREF1-208ENST00000467539 USPL1Q5W0Q7 1092 aa24.01■■□□□ 1.43
CGREF1-208ENST00000467539 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
CGREF1-208ENST00000467539 YBX3P16989 372 aaKnown RBP eCLIP24■■□□□ 1.43
CGREF1-208ENST00000467539 TGFB2P61812 414 aa24■■□□□ 1.43
CGREF1-208ENST00000467539 USP16Q9Y5T5 823 aa24■■□□□ 1.43
CGREF1-208ENST00000467539 A0A087WZG4 1122 aa23.99■■□□□ 1.43
CGREF1-208ENST00000467539 SNRPA1P09661 255 aaKnown RBP23.99■■□□□ 1.43
CGREF1-208ENST00000467539 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
CGREF1-208ENST00000467539 A1BGP04217 495 aa23.98■■□□□ 1.43
CGREF1-208ENST00000467539 IL6STP40189 918 aaPredicted RBP23.98■■□□□ 1.43
CGREF1-208ENST00000467539 COL15A1P39059 1388 aa23.98■■□□□ 1.43
CGREF1-208ENST00000467539 MIS18AQ9NYP9 233 aa23.97■■□□□ 1.43
CGREF1-208ENST00000467539 RIPK4P57078 832 aa23.96■■□□□ 1.43
CGREF1-208ENST00000467539 DDR1Q08345 913 aa23.96■■□□□ 1.43
CGREF1-208ENST00000467539 BCL2L12Q9HB09 334 aa23.96■■□□□ 1.43
CGREF1-208ENST00000467539 C4AP0C0L4 1744 aa23.95■■□□□ 1.42
CGREF1-208ENST00000467539 POLRMTO00411 1230 aaKnown RBP23.94■■□□□ 1.42
CGREF1-208ENST00000467539 TMPOP42166 694 aaKnown RBP23.94■■□□□ 1.42
CGREF1-208ENST00000467539 GOLGB1Q14789 3259 aaKnown RBP23.94■■□□□ 1.42
CGREF1-208ENST00000467539 A0A0G2JLW4 131 aa23.93■■□□□ 1.42
CGREF1-208ENST00000467539 PRAMEF22A3QJZ6 481 aa23.93■■□□□ 1.42
CGREF1-208ENST00000467539 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
CGREF1-208ENST00000467539 NFIXQ14938 502 aa23.93■■□□□ 1.42
CGREF1-208ENST00000467539 WDR43Q15061 677 aaKnown RBP eCLIP23.93■■□□□ 1.42
CGREF1-208ENST00000467539 ADAMTS8Q9UP79 889 aa23.93■■□□□ 1.42
CGREF1-208ENST00000467539 NPM2Q86SE8 214 aaKnown RBP23.92■■□□□ 1.42
CGREF1-208ENST00000467539 RUNDC1Q96C34 613 aa23.92■■□□□ 1.42
CGREF1-208ENST00000467539 THUMPD2Q9BTF0 503 aaKnown RBP23.92■■□□□ 1.42
CGREF1-208ENST00000467539 TBC1D2BQ9UPU7 963 aa23.91■■□□□ 1.42
CGREF1-208ENST00000467539 C10orf71Q711Q0 1435 aa23.91■■□□□ 1.42
CGREF1-208ENST00000467539 EIF4A1P60842 406 aaKnown RBP23.9■■□□□ 1.42
CGREF1-208ENST00000467539 DLG5Q8TDM6 1919 aa23.89■■□□□ 1.42
CGREF1-208ENST00000467539 DPEP1P16444 411 aa23.89■■□□□ 1.41
CGREF1-208ENST00000467539 KCNA3P22001 575 aa23.89■■□□□ 1.41
CGREF1-208ENST00000467539 LMOD3Q0VAK6 560 aa23.89■■□□□ 1.41
CGREF1-208ENST00000467539 ZNF330Q9Y3S2 320 aaPredicted RBP23.89■■□□□ 1.41
CGREF1-208ENST00000467539 GIGYF1O75420 1035 aaPredicted RBP23.88■■□□□ 1.41
CGREF1-208ENST00000467539 SERPINB2P05120 415 aa23.88■■□□□ 1.41
CGREF1-208ENST00000467539 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
CGREF1-208ENST00000467539 BABAM1Q9NWV8 329 aa23.88■■□□□ 1.41
CGREF1-208ENST00000467539 CHD4Q14839 1912 aa23.88■■□□□ 1.41
CGREF1-208ENST00000467539 PXDNLA1KZ92 1463 aa23.87■■□□□ 1.41
CGREF1-208ENST00000467539 KIF13BQ9NQT8 1826 aa23.87■■□□□ 1.41
CGREF1-208ENST00000467539 ZNF784Q8NCA9 323 aaPredicted RBP23.87■■□□□ 1.41
CGREF1-208ENST00000467539 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
CGREF1-208ENST00000467539 CAMTA2O94983 1202 aa23.86■■□□□ 1.41
CGREF1-208ENST00000467539 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
CGREF1-208ENST00000467539 DZIP3Q86Y13 1208 aaKnown RBP23.86■■□□□ 1.41
CGREF1-208ENST00000467539 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
CGREF1-208ENST00000467539 WWC3Q9ULE0 1092 aa23.86■■□□□ 1.41
CGREF1-208ENST00000467539 PIP4K2AP48426 406 aaPredicted RBP23.85■■□□□ 1.41
CGREF1-208ENST00000467539 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
CGREF1-208ENST00000467539 TBC1D9BQ66K14 1250 aa23.85■■□□□ 1.41
CGREF1-208ENST00000467539 RRP7AQ9Y3A4 280 aaKnown RBP23.85■■□□□ 1.41
CGREF1-208ENST00000467539 CLEC4GQ6UXB4 293 aa23.84■■□□□ 1.41
CGREF1-208ENST00000467539 BICDL1Q6ZP65 573 aa23.84■■□□□ 1.41
CGREF1-208ENST00000467539 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
CGREF1-208ENST00000467539 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.41
CGREF1-208ENST00000467539 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
CGREF1-208ENST00000467539 BCS1LQ9Y276 419 aa23.83■■□□□ 1.41
CGREF1-208ENST00000467539 SETDB2Q96T68 719 aa23.82■■□□□ 1.4
CGREF1-208ENST00000467539 RGL2O15211 777 aa23.81■■□□□ 1.4
CGREF1-208ENST00000467539 KIAA1551Q9HCM1 1747 aa23.79■■□□□ 1.4
CGREF1-208ENST00000467539 CHL1O00533 1208 aa23.79■■□□□ 1.4
CGREF1-208ENST00000467539 CHRNA5P30532 468 aa23.79■■□□□ 1.4
CGREF1-208ENST00000467539 N4BP2Q86UW6 1770 aaPredicted RBP23.78■■□□□ 1.4
CGREF1-208ENST00000467539 DALRD3Q5D0E6 543 aaKnown RBP23.78■■□□□ 1.4
CGREF1-208ENST00000467539 BRIP1Q9BX63 1249 aa23.77■■□□□ 1.4
CGREF1-208ENST00000467539 ZNF652Q9Y2D9 606 aa23.77■■□□□ 1.4
CGREF1-208ENST00000467539 KDM3BQ7LBC6 1761 aa23.77■■□□□ 1.4
CGREF1-208ENST00000467539 CARMIL3Q8ND23 1372 aa23.76■■□□□ 1.39
CGREF1-208ENST00000467539 APAF1O14727 1248 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 PRR5LQ6MZQ0 368 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 ARHGAP27Q6ZUM4 889 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 NRXN2Q9P2S2 1712 aa23.75■■□□□ 1.39
CGREF1-208ENST00000467539 ERVV-1B6SEH8 477 aa23.74■■□□□ 1.39
CGREF1-208ENST00000467539 H0YIN7 160 aa23.74■■□□□ 1.39
CGREF1-208ENST00000467539 AFDNP55196 1824 aaKnown RBP23.74■■□□□ 1.39
CGREF1-208ENST00000467539 ERBB4Q15303 1308 aa23.74■■□□□ 1.39
CGREF1-208ENST00000467539 ANP32CO43423 234 aa23.73■■□□□ 1.39
CGREF1-208ENST00000467539 PDE6BP35913 854 aa23.73■■□□□ 1.39
CGREF1-208ENST00000467539 C2CD5Q86YS7 1000 aa23.73■■□□□ 1.39
CGREF1-208ENST00000467539 NGEFQ8N5V2 710 aa23.73■■□□□ 1.39
CGREF1-208ENST00000467539 MYL6BP14649 208 aa23.72■■□□□ 1.39
CGREF1-208ENST00000467539 HLFQ16534 295 aa23.72■■□□□ 1.39
CGREF1-208ENST00000467539 LAS1LQ9Y4W2 734 aaKnown RBP23.72■■□□□ 1.39
CGREF1-208ENST00000467539 EIF2S2P20042 333 aaKnown RBP23.71■■□□□ 1.39
CGREF1-208ENST00000467539 PDIA6Q15084 440 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms