RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 YTHDC1Q96MU7 727 aaKnown RBP14.72□□□□□ -0.05
PRPF3-203ENST00000467514 SRP68Q9UHB9 627 aaKnown RBP14.72□□□□□ -0.05
PRPF3-203ENST00000467514 ZC3H4Q9UPT8 1303 aaKnown RBP14.71□□□□□ -0.05
PRPF3-203ENST00000467514 ERVV-2B6SEH9 535 aa14.71□□□□□ -0.05
PRPF3-203ENST00000467514 ZPR1O75312 459 aa14.71□□□□□ -0.05
PRPF3-203ENST00000467514 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.06
PRPF3-203ENST00000467514 LMNB1P20700 586 aa14.7□□□□□ -0.06
PRPF3-203ENST00000467514 CRKLP46109 303 aaKnown RBP14.7□□□□□ -0.06
PRPF3-203ENST00000467514 FKBP8Q14318 412 aa14.7□□□□□ -0.06
PRPF3-203ENST00000467514 ZNF530Q6P9A1 599 aaPredicted RBP14.7□□□□□ -0.06
PRPF3-203ENST00000467514 SLC4A9Q96Q91 983 aa14.7□□□□□ -0.06
PRPF3-203ENST00000467514 CCDC88AQ3V6T2 1871 aa14.69□□□□□ -0.06
PRPF3-203ENST00000467514 USP42Q9H9J4 1324 aaKnown RBP14.69□□□□□ -0.06
PRPF3-203ENST00000467514 TNNT2P45379 298 aaPredicted RBP14.69□□□□□ -0.06
PRPF3-203ENST00000467514 DDR1Q08345 913 aa14.69□□□□□ -0.06
PRPF3-203ENST00000467514 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
PRPF3-203ENST00000467514 C1orf141Q5JVX7 400 aa14.69□□□□□ -0.06
PRPF3-203ENST00000467514 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
PRPF3-203ENST00000467514 MTHFSP49914 203 aa14.67□□□□□ -0.06
PRPF3-203ENST00000467514 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
PRPF3-203ENST00000467514 EIF4A2Q14240 407 aaKnown RBP14.66□□□□□ -0.06
PRPF3-203ENST00000467514 MKRN1Q9UHC7 482 aaKnown RBP14.66□□□□□ -0.06
PRPF3-203ENST00000467514 POLRMTO00411 1230 aaKnown RBP14.65□□□□□ -0.06
PRPF3-203ENST00000467514 USPL1Q5W0Q7 1092 aa14.65□□□□□ -0.06
PRPF3-203ENST00000467514 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
PRPF3-203ENST00000467514 TTLL6Q8N841 843 aa14.65□□□□□ -0.06
PRPF3-203ENST00000467514 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
PRPF3-203ENST00000467514 AFDNP55196 1824 aaKnown RBP14.64□□□□□ -0.07
PRPF3-203ENST00000467514 TJP1Q07157 1748 aa14.64□□□□□ -0.07
PRPF3-203ENST00000467514 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
PRPF3-203ENST00000467514 AMOTQ4VCS5 1084 aa14.64□□□□□ -0.07
PRPF3-203ENST00000467514 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
PRPF3-203ENST00000467514 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
PRPF3-203ENST00000467514 DLEC1Q9Y238 1755 aa14.63□□□□□ -0.07
PRPF3-203ENST00000467514 C2CD5Q86YS7 1000 aa14.63□□□□□ -0.07
PRPF3-203ENST00000467514 H0YIN7 160 aa14.62□□□□□ -0.07
PRPF3-203ENST00000467514 FAM9BQ8IZU0 186 aa14.62□□□□□ -0.07
PRPF3-203ENST00000467514 NFATC2IPQ8NCF5 419 aa14.62□□□□□ -0.07
PRPF3-203ENST00000467514 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
PRPF3-203ENST00000467514 NPHP1O15259 732 aa14.61□□□□□ -0.07
PRPF3-203ENST00000467514 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
PRPF3-203ENST00000467514 SERPINB2P05120 415 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 TM4SF1P30408 202 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 ERFEQ4G0M1 354 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 BICDL1Q6ZP65 573 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 ZNF622Q969S3 477 aaKnown RBP eCLIP14.6□□□□□ -0.074e-9■□□□□ 11.3
PRPF3-203ENST00000467514 COL15A1P39059 1388 aa14.6□□□□□ -0.07
PRPF3-203ENST00000467514 NFIXQ14938 502 aa14.59□□□□□ -0.07
PRPF3-203ENST00000467514 DNAJC10Q8IXB1 793 aa14.59□□□□□ -0.07
PRPF3-203ENST00000467514 FOXN1O15353 648 aa14.58□□□□□ -0.08
PRPF3-203ENST00000467514 INTS5Q6P9B9 1019 aaKnown RBP14.58□□□□□ -0.08
PRPF3-203ENST00000467514 CACNA1SQ13698 1873 aa14.58□□□□□ -0.08
PRPF3-203ENST00000467514 SOS1Q07889 1333 aaPredicted RBP14.58□□□□□ -0.08
PRPF3-203ENST00000467514 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.08
PRPF3-203ENST00000467514 SCN11AQ9UI33 1791 aa14.57□□□□□ -0.08
PRPF3-203ENST00000467514 NFKBIEO00221 500 aa14.57□□□□□ -0.08
PRPF3-203ENST00000467514 CTCFP49711 727 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-203ENST00000467514 HNRNPUQ00839 825 aaKnown RBP eCLIP14.57□□□□□ -0.08
PRPF3-203ENST00000467514 NARFQ9UHQ1 456 aa14.57□□□□□ -0.08
PRPF3-203ENST00000467514 COL3A1P02461 1466 aaPredicted RBP14.57□□□□□ -0.08
PRPF3-203ENST00000467514 ADAMTS7Q9UKP4 1686 aa14.56□□□□□ -0.08
PRPF3-203ENST00000467514 NRXN2Q9P2S2 1712 aa14.56□□□□□ -0.08
PRPF3-203ENST00000467514 C21orf2O43822 256 aa14.56□□□□□ -0.08
PRPF3-203ENST00000467514 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
PRPF3-203ENST00000467514 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
PRPF3-203ENST00000467514 SULT6B1Q6IMI4 303 aa14.55□□□□□ -0.08
PRPF3-203ENST00000467514 NPM2Q86SE8 214 aaKnown RBP14.55□□□□□ -0.08
PRPF3-203ENST00000467514 AEBP1Q8IUX7 1158 aa14.55□□□□□ -0.08
PRPF3-203ENST00000467514 TAOK3Q9H2K8 898 aa14.55□□□□□ -0.08
PRPF3-203ENST00000467514 CNTNAP1P78357 1384 aa14.55□□□□□ -0.08
PRPF3-203ENST00000467514 IQCA1LA6NCM1 817 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 CANXP27824 592 aaKnown RBP14.54□□□□□ -0.08
PRPF3-203ENST00000467514 PDE6BP35913 854 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 ADAMTS8Q9UP79 889 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 ZBTB1Q9Y2K1 713 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 CARMIL3Q8ND23 1372 aa14.54□□□□□ -0.08
PRPF3-203ENST00000467514 VIRMAQ69YN4 1812 aaKnown RBP14.54□□□□□ -0.08
PRPF3-203ENST00000467514 FER1L6Q2WGJ9 1857 aa14.53□□□□□ -0.08
PRPF3-203ENST00000467514 POTECB2RU33 542 aa14.53□□□□□ -0.08
PRPF3-203ENST00000467514 DDNO94850 711 aaPredicted RBP14.53□□□□□ -0.08
PRPF3-203ENST00000467514 CYP19A1P11511 503 aaPredicted RBP14.53□□□□□ -0.08
PRPF3-203ENST00000467514 EAPPQ56P03 285 aaPredicted RBP14.53□□□□□ -0.08
PRPF3-203ENST00000467514 SLC34A2O95436 690 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 POTEIP0CG38 1075 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 POTEJP0CG39 1038 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 LBX1P52954 281 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 FAM161AQ3B820 660 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 AKAP4Q5JQC9 854 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 LDHDQ86WU2 507 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 SLC52A2Q9HAB3 445 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 PDZRN3Q9UPQ7 1066 aa14.52□□□□□ -0.09
PRPF3-203ENST00000467514 A0A087WZG4 1122 aa14.51□□□□□ -0.09
PRPF3-203ENST00000467514 TMEM88BA6NKF7 163 aa14.51□□□□□ -0.09
PRPF3-203ENST00000467514 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
PRPF3-203ENST00000467514 CCDC24Q8N4L8 307 aa14.51□□□□□ -0.09
PRPF3-203ENST00000467514 COL11A2P13942 1736 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms