RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 RTL1A6NKG5 1358 aa9.12□□□□□ -0.95
PTPRE-206ENST00000467366 CNTNAP4Q9C0A0 1308 aa9.11□□□□□ -0.95
PTPRE-206ENST00000467366 RRS1Q15050 365 aaKnown RBP9.11□□□□□ -0.95
PTPRE-206ENST00000467366 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
PTPRE-206ENST00000467366 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
PTPRE-206ENST00000467366 SLC12A5Q9H2X9 1139 aa9.11□□□□□ -0.95
PTPRE-206ENST00000467366 PDE4DIPQ5VU43 2346 aa9.11□□□□□ -0.95
PTPRE-206ENST00000467366 USP42Q9H9J4 1324 aaKnown RBP9.1□□□□□ -0.95
PTPRE-206ENST00000467366 TM4SF1P30408 202 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 DGKZQ13574 1117 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 TTLL6Q8N841 843 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 UBE2Q2Q8WVN8 375 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 RBM42Q9BTD8 480 aaKnown RBP9.1□□□□□ -0.95
PTPRE-206ENST00000467366 BEGAINQ9BUH8 593 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 TAF1DQ9H5J8 278 aaPredicted RBP9.1□□□□□ -0.95
PTPRE-206ENST00000467366 SMG6Q86US8 1419 aaKnown RBP9.1□□□□□ -0.95
PTPRE-206ENST00000467366 CASP8AP2Q9UKL3 1982 aa9.1□□□□□ -0.95
PTPRE-206ENST00000467366 SOX10P56693 466 aa9.09□□□□□ -0.95
PTPRE-206ENST00000467366 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
PTPRE-206ENST00000467366 COG3Q96JB2 828 aa9.09□□□□□ -0.95
PTPRE-206ENST00000467366 PODXL2Q9NZ53 605 aa9.09□□□□□ -0.95
PTPRE-206ENST00000467366 ABT1Q9ULW3 272 aaKnown RBP9.09□□□□□ -0.95
PTPRE-206ENST00000467366 TIMELESSQ9UNS1 1208 aa9.09□□□□□ -0.95
PTPRE-206ENST00000467366 GRM1Q13255 1194 aa9.08□□□□□ -0.96
PTPRE-206ENST00000467366 CYP4F22Q6NT55 531 aa9.08□□□□□ -0.96
PTPRE-206ENST00000467366 CAPNS2Q96L46 248 aa9.08□□□□□ -0.96
PTPRE-206ENST00000467366 GPR101Q96P66 508 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-206ENST00000467366 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
PTPRE-206ENST00000467366 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
PTPRE-206ENST00000467366 TJP1Q07157 1748 aa9.08□□□□□ -0.96
PTPRE-206ENST00000467366 CACNA1SQ13698 1873 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 ANKRD31Q8N7Z5 1873 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 IQCA1LA6NCM1 817 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 HSP90AB2PQ58FF8 381 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-206ENST00000467366 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 COL11A2P13942 1736 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-206ENST00000467366 INSRP06213 1382 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 CARMIL3Q8ND23 1372 aa9.07□□□□□ -0.96
PTPRE-206ENST00000467366 C21orf2O43822 256 aa9.06□□□□□ -0.96
PTPRE-206ENST00000467366 AOC2O75106 756 aa9.06□□□□□ -0.96
PTPRE-206ENST00000467366 CRKLP46109 303 aaKnown RBP9.06□□□□□ -0.96
PTPRE-206ENST00000467366 FMR1Q06787 632 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPRE-206ENST00000467366 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-206ENST00000467366 CNTROBQ8N137 903 aa9.06□□□□□ -0.96
PTPRE-206ENST00000467366 L3MBTL3Q96JM7 780 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-206ENST00000467366 TERF2IPQ9NYB0 399 aa9.06□□□□□ -0.96
PTPRE-206ENST00000467366 SPG7Q9UQ90 795 aa9.06□□□□□ -0.96
PTPRE-206ENST00000467366 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
PTPRE-206ENST00000467366 PHKG2P15735 406 aa9.05□□□□□ -0.96
PTPRE-206ENST00000467366 USPL1Q5W0Q7 1092 aa9.05□□□□□ -0.96
PTPRE-206ENST00000467366 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
PTPRE-206ENST00000467366 H0YIN7 160 aa9.04□□□□□ -0.96
PTPRE-206ENST00000467366 EPHX2P34913 555 aa9.04□□□□□ -0.96
PTPRE-206ENST00000467366 ECE1P42892 770 aa9.04□□□□□ -0.96
PTPRE-206ENST00000467366 NFIXQ14938 502 aa9.04□□□□□ -0.96
PTPRE-206ENST00000467366 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
PTPRE-206ENST00000467366 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTPRE-206ENST00000467366 ROCK2O75116 1388 aaKnown RBP9.03□□□□□ -0.96
PTPRE-206ENST00000467366 FLT4P35916 1363 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 TRPM7Q96QT4 1865 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 SERPINB2P05120 415 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 NEFLP07196 543 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 TAOK3Q9H2K8 898 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 HACL1Q9UJ83 578 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 ARFGEF2Q9Y6D5 1785 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 SLX4Q8IY92 1834 aa9.03□□□□□ -0.96
PTPRE-206ENST00000467366 TONSLQ96HA7 1378 aa9.02□□□□□ -0.97
PTPRE-206ENST00000467366 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-206ENST00000467366 PTCD1O75127 700 aaKnown RBP9.02□□□□□ -0.97
PTPRE-206ENST00000467366 MAP2K2P36507 400 aa9.02□□□□□ -0.97
PTPRE-206ENST00000467366 ZNF622Q969S3 477 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPRE-206ENST00000467366 BCL2L12Q9HB09 334 aa9.02□□□□□ -0.97
PTPRE-206ENST00000467366 RNF123Q5XPI4 1314 aa9.02□□□□□ -0.97
PTPRE-206ENST00000467366 ZNF541Q9H0D2 1346 aa9.02□□□□□ -0.97
PTPRE-206ENST00000467366 CA12O43570 354 aa9.01□□□□□ -0.97
PTPRE-206ENST00000467366 ZPR1O75312 459 aa9.01□□□□□ -0.97
PTPRE-206ENST00000467366 HABP4Q5JVS0 413 aaKnown RBP9.01□□□□□ -0.97
PTPRE-206ENST00000467366 CST9Q5W186 159 aa9.01□□□□□ -0.97
PTPRE-206ENST00000467366 INTS5Q6P9B9 1019 aaKnown RBP9.01□□□□□ -0.97
PTPRE-206ENST00000467366 PNMA8AQ86V59 439 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-206ENST00000467366 GGNBP2Q9H3C7 697 aa9.01□□□□□ -0.97
PTPRE-206ENST00000467366 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPRE-206ENST00000467366 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
PTPRE-206ENST00000467366 ERVV-2B6SEH9 535 aa9□□□□□ -0.97
PTPRE-206ENST00000467366 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
PTPRE-206ENST00000467366 GCC1Q96CN9 775 aa9□□□□□ -0.97
PTPRE-206ENST00000467366 KIF20BQ96Q89 1820 aa9□□□□□ -0.97
PTPRE-206ENST00000467366 ANKRD26Q9UPS8 1709 aa9□□□□□ -0.97
PTPRE-206ENST00000467366 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 TRAF5O00463 557 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 FYB1O15117 783 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 BRPF1P55201 1214 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-206ENST00000467366 CIAPIN1Q6FI81 312 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 NARFQ9UHQ1 456 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
PTPRE-206ENST00000467366 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-206ENST00000467366 EYA1Q99502 592 aa8.98□□□□□ -0.97
PTPRE-206ENST00000467366 COL15A1P39059 1388 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms