RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ST18O60284 1047 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 IGHDP01880 384 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 CHRNA2Q15822 529 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 LGR6Q9HBX8 967 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 PRDM11Q9NQV5 511 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 CRYBG1Q9Y4K1 1723 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 WDR17Q8IZU2 1322 aa12.1□□□□□ -0.47
APOBEC1-202ENST00000467171 NHSL1Q5SYE7 1610 aa12.09□□□□□ -0.47
APOBEC1-202ENST00000467171 ZBTB7BO15156 539 aaPredicted RBP12.09□□□□□ -0.47
APOBEC1-202ENST00000467171 TEFQ10587 303 aa12.09□□□□□ -0.47
APOBEC1-202ENST00000467171 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
APOBEC1-202ENST00000467171 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
APOBEC1-202ENST00000467171 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 PHKG2P15735 406 aa12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 EIF4A1P60842 406 aaKnown RBP12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 CARD10Q9BWT7 1032 aa12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 RBM19Q9Y4C8 960 aaKnown RBP12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
APOBEC1-202ENST00000467171 RGS12O14924 1447 aa12.07□□□□□ -0.48
APOBEC1-202ENST00000467171 IFNL2Q8IZJ0 200 aa12.07□□□□□ -0.48
APOBEC1-202ENST00000467171 STK31Q9BXU1 1019 aa12.07□□□□□ -0.48
APOBEC1-202ENST00000467171 FAM208AQ9UK61 1670 aaKnown RBP12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 MEGF6O75095 1541 aa12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 BTBD11A6QL63 1104 aa12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 COL5A2P05997 1499 aaPredicted RBP12.06□□□□□ -0.48
APOBEC1-202ENST00000467171 TMEM121BQ9BXQ6 578 aaPredicted RBP12.05□□□□□ -0.48
APOBEC1-202ENST00000467171 ADAMTS7Q9UKP4 1686 aa12.04□□□□□ -0.48
APOBEC1-202ENST00000467171 TOM1L2Q6ZVM7 507 aa12.04□□□□□ -0.48
APOBEC1-202ENST00000467171 SLC52A2Q9HAB3 445 aa12.04□□□□□ -0.48
APOBEC1-202ENST00000467171 CYP27B1O15528 508 aa12.03□□□□□ -0.48
APOBEC1-202ENST00000467171 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
APOBEC1-202ENST00000467171 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
APOBEC1-202ENST00000467171 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
APOBEC1-202ENST00000467171 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
APOBEC1-202ENST00000467171 G3V3G9 751 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 TOM1O60784 492 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 IL2RBP14784 551 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 FLIIQ13045 1269 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 G2E3Q7L622 706 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 ZCRB1Q8TBF4 217 aaKnown RBP12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 MRC1P22897 1456 aa12.02□□□□□ -0.49
APOBEC1-202ENST00000467171 KCNQ3O43525 872 aa12.01□□□□□ -0.49
APOBEC1-202ENST00000467171 EVA1CP58658 441 aa12.01□□□□□ -0.49
APOBEC1-202ENST00000467171 BACH2Q9BYV9 841 aa12.01□□□□□ -0.49
APOBEC1-202ENST00000467171 PDE4AP27815 886 aa12□□□□□ -0.49
APOBEC1-202ENST00000467171 ZNF790Q6PG37 636 aa12□□□□□ -0.49
APOBEC1-202ENST00000467171 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
APOBEC1-202ENST00000467171 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
APOBEC1-202ENST00000467171 GCC1Q96CN9 775 aa12□□□□□ -0.49
APOBEC1-202ENST00000467171 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
APOBEC1-202ENST00000467171 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
APOBEC1-202ENST00000467171 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
APOBEC1-202ENST00000467171 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 CDAN1Q8IWY9 1227 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 DBF4Q9UBU7 674 aaPredicted RBP11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 PXDNLA1KZ92 1463 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 ABCA3Q99758 1704 aa11.99□□□□□ -0.49
APOBEC1-202ENST00000467171 KDM3BQ7LBC6 1761 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 RGPD5Q99666 1765 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 PKD1L3Q7Z443 1732 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 SKAP1Q86WV1 359 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
APOBEC1-202ENST00000467171 CABP4P57796 275 aa11.97□□□□□ -0.49
APOBEC1-202ENST00000467171 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
APOBEC1-202ENST00000467171 ANKRD44Q8N8A2 993 aa11.97□□□□□ -0.49
APOBEC1-202ENST00000467171 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
APOBEC1-202ENST00000467171 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
APOBEC1-202ENST00000467171 DISP2A7MBM2 1401 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 IBTKQ9P2D0 1353 aaPredicted RBP11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 F6X3S4 739 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 GNAI3P08754 354 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 EIF2S2P20042 333 aaKnown RBP11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 RGS3P49796 1198 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 NUCB1Q02818 461 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
APOBEC1-202ENST00000467171 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 NECTIN2Q92692 538 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 FMNL2Q96PY5 1086 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 MEIS3Q99687 375 aa11.95□□□□□ -0.5
APOBEC1-202ENST00000467171 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms