RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PASKQ96RG2 1323 aa7.88□□□□□ -1.15
CXXC4-202ENST00000466963 ZPR1O75312 459 aa7.88□□□□□ -1.15
CXXC4-202ENST00000466963 COL13A1Q5TAT6 717 aaPredicted RBP7.88□□□□□ -1.15
CXXC4-202ENST00000466963 IBTKQ9P2D0 1353 aaPredicted RBP7.88□□□□□ -1.15
CXXC4-202ENST00000466963 H0YIN7 160 aa7.88□□□□□ -1.15
CXXC4-202ENST00000466963 ARHGEF1Q92888 912 aaKnown RBP7.88□□□□□ -1.15
CXXC4-202ENST00000466963 MAP2K2P36507 400 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 BRIP1Q9BX63 1249 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 UBR2Q8IWV8 1755 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 SOS1Q07889 1333 aaPredicted RBP7.87□□□□□ -1.15
CXXC4-202ENST00000466963 TMEM88BA6NKF7 163 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 POLRMTO00411 1230 aaKnown RBP7.87□□□□□ -1.15
CXXC4-202ENST00000466963 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
CXXC4-202ENST00000466963 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 ITPK1Q13572 414 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 AFDNP55196 1824 aaKnown RBP7.86□□□□□ -1.15
CXXC4-202ENST00000466963 CABP4P57796 275 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 RTKN2Q8IZC4 609 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 NECTIN2Q92692 538 aa7.86□□□□□ -1.15
CXXC4-202ENST00000466963 CARMIL3Q8ND23 1372 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 SOX12O15370 315 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 MLLT1Q03111 559 aaPredicted RBP7.85□□□□□ -1.15
CXXC4-202ENST00000466963 BCORQ6W2J9 1755 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 ZNF526Q8TF50 670 aaPredicted RBP7.85□□□□□ -1.15
CXXC4-202ENST00000466963 SAGE1Q9NXZ1 904 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 NPM3O75607 178 aaKnown RBP7.85□□□□□ -1.15
CXXC4-202ENST00000466963 CAPN2P17655 700 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 NCBP3Q53F19 620 aaKnown RBP7.85□□□□□ -1.15
CXXC4-202ENST00000466963 CLEC4GQ6UXB4 293 aa7.85□□□□□ -1.15
CXXC4-202ENST00000466963 LTV1Q96GA3 475 aaPredicted RBP7.85□□□□□ -1.15
CXXC4-202ENST00000466963 A0A0G2JLW4 131 aa7.84□□□□□ -1.15
CXXC4-202ENST00000466963 AKAP4Q5JQC9 854 aa7.84□□□□□ -1.15
CXXC4-202ENST00000466963 BEGAINQ9BUH8 593 aa7.84□□□□□ -1.15
CXXC4-202ENST00000466963 STARD3NLO95772 234 aa7.84□□□□□ -1.15
CXXC4-202ENST00000466963 MMP14P50281 582 aa7.84□□□□□ -1.15
CXXC4-202ENST00000466963 PHF14O94880 888 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 RNF123Q5XPI4 1314 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 CRKLP46109 303 aaKnown RBP7.83□□□□□ -1.16
CXXC4-202ENST00000466963 PPARGC1BQ86YN6 1023 aaKnown RBP7.83□□□□□ -1.16
CXXC4-202ENST00000466963 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 COL15A1P39059 1388 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 ST5P78524 1137 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 ZNF652Q9Y2D9 606 aa7.83□□□□□ -1.16
CXXC4-202ENST00000466963 KLRG2A4D1S0 409 aaPredicted RBP7.82□□□□□ -1.16
CXXC4-202ENST00000466963 NOM1Q5C9Z4 860 aaKnown RBP7.82□□□□□ -1.16
CXXC4-202ENST00000466963 EYA1Q99502 592 aa7.82□□□□□ -1.16
CXXC4-202ENST00000466963 HACL1Q9UJ83 578 aa7.82□□□□□ -1.16
CXXC4-202ENST00000466963 IL6STP40189 918 aaPredicted RBP7.82□□□□□ -1.16
CXXC4-202ENST00000466963 PKN2Q16513 984 aaKnown RBP7.82□□□□□ -1.16
CXXC4-202ENST00000466963 USP50Q70EL3 339 aaPredicted RBP7.82□□□□□ -1.16
CXXC4-202ENST00000466963 MASTLQ96GX5 879 aa7.82□□□□□ -1.16
CXXC4-202ENST00000466963 PSMD1Q99460 953 aa7.82□□□□□ -1.16
CXXC4-202ENST00000466963 HSPA8P11142 646 aaKnown RBP7.81□□□□□ -1.16
CXXC4-202ENST00000466963 ALDH1B1P30837 517 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 HSP90AB2PQ58FF8 381 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 C2CD5Q86YS7 1000 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 ZC3H15Q8WU90 426 aaKnown RBP7.81□□□□□ -1.16
CXXC4-202ENST00000466963 ABHD8Q96I13 439 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 ASAP1Q9ULH1 1129 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 MYH14Q7Z406 1995 aaKnown RBP7.81□□□□□ -1.16
CXXC4-202ENST00000466963 ST20-MTHFSA0A0A6YYL1 179 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 SERPINB2P05120 415 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 NPR1P16066 1061 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 MTHFSP49914 203 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 BRPF1P55201 1214 aaPredicted RBP7.81□□□□□ -1.16
CXXC4-202ENST00000466963 FKBP4Q02790 459 aaKnown RBP eCLIP7.81□□□□□ -1.16
CXXC4-202ENST00000466963 DEFB115Q30KQ5 88 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 GPC2Q8N158 579 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 SUPT20HQ8NEM7 779 aa7.81□□□□□ -1.16
CXXC4-202ENST00000466963 KIF7Q2M1P5 1343 aa7.8□□□□□ -1.16
CXXC4-202ENST00000466963 DDR1Q08345 913 aa7.8□□□□□ -1.16
CXXC4-202ENST00000466963 INTS5Q6P9B9 1019 aaKnown RBP7.8□□□□□ -1.16
CXXC4-202ENST00000466963 TMC4Q7Z404 712 aa7.8□□□□□ -1.16
CXXC4-202ENST00000466963 NPC1L1Q9UHC9 1359 aa7.8□□□□□ -1.16
CXXC4-202ENST00000466963 CCDC88AQ3V6T2 1871 aa7.8□□□□□ -1.16
CXXC4-202ENST00000466963 ZNF609O15014 1411 aa7.79□□□□□ -1.16
CXXC4-202ENST00000466963 ZNF530Q6P9A1 599 aaPredicted RBP7.79□□□□□ -1.16
CXXC4-202ENST00000466963 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
CXXC4-202ENST00000466963 TAF1DQ9H5J8 278 aaPredicted RBP7.79□□□□□ -1.16
CXXC4-202ENST00000466963 SLC52A2Q9HAB3 445 aa7.79□□□□□ -1.16
CXXC4-202ENST00000466963 FOXN1O15353 648 aa7.79□□□□□ -1.16
CXXC4-202ENST00000466963 CYP19A1P11511 503 aaPredicted RBP7.79□□□□□ -1.16
CXXC4-202ENST00000466963 ERFEQ4G0M1 354 aa7.79□□□□□ -1.16
CXXC4-202ENST00000466963 RBM42Q9BTD8 480 aaKnown RBP7.79□□□□□ -1.16
CXXC4-202ENST00000466963 ANKRD31Q8N7Z5 1873 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 RRS1Q15050 365 aaKnown RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 POLKQ9UBT6 870 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 WDR33Q9C0J8 1336 aaKnown RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 NFKBIEO00221 500 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 NYXQ9GZU5 481 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 SIPA1L3O60292 1781 aaPredicted RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 POTECB2RU33 542 aa7.78□□□□□ -1.16
CXXC4-202ENST00000466963 EIF5P55010 431 aaKnown RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
CXXC4-202ENST00000466963 NFIXQ14938 502 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms