RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 SIRT2Q8IXJ6 389 aa15.24■□□□□ 0.03
LAMP3-202ENST00000466939 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
LAMP3-202ENST00000466939 ADCY9O60503 1353 aa15.24■□□□□ 0.03
LAMP3-202ENST00000466939 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 EXOC5O00471 708 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
LAMP3-202ENST00000466939 NUCB1Q02818 461 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 CERKQ8TCT0 537 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 CDCA7Q9BWT1 371 aaPredicted RBP15.23■□□□□ 0.03
LAMP3-202ENST00000466939 PAPPAQ13219 1627 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
LAMP3-202ENST00000466939 LAMB4A4D0S4 1761 aa15.22■□□□□ 0.03
LAMP3-202ENST00000466939 HMMRO75330 724 aa15.22■□□□□ 0.03
LAMP3-202ENST00000466939 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
LAMP3-202ENST00000466939 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
LAMP3-202ENST00000466939 CCDC9Q9Y3X0 531 aaKnown RBP15.22■□□□□ 0.03
LAMP3-202ENST00000466939 SPATA31A1Q5TZJ5 1347 aa15.22■□□□□ 0.03
LAMP3-202ENST00000466939 TNS2Q63HR2 1409 aa15.22■□□□□ 0.03
LAMP3-202ENST00000466939 UBTFL1P0CB47 393 aaPredicted RBP15.21■□□□□ 0.03
LAMP3-202ENST00000466939 MYL6BP14649 208 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
LAMP3-202ENST00000466939 ANKRD45Q5TZF3 282 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
LAMP3-202ENST00000466939 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
LAMP3-202ENST00000466939 SLIT2O94813 1529 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 GLI3P10071 1580 aa15.21■□□□□ 0.03
LAMP3-202ENST00000466939 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.02
LAMP3-202ENST00000466939 PDIA6Q15084 440 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 BEND3Q5T5X7 828 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 USP16Q9Y5T5 823 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 UBR2Q8IWV8 1755 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 SPATA31A5Q5VU36 1347 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 SPATA31A7Q8IWB4 1347 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 XAGE3Q8WTP9 111 aa15.2■□□□□ 0.02
LAMP3-202ENST00000466939 LRP6O75581 1613 aa15.19■□□□□ 0.02
LAMP3-202ENST00000466939 PTCD1O75127 700 aaKnown RBP15.19■□□□□ 0.02
LAMP3-202ENST00000466939 C8orf34Q49A92 452 aa15.19■□□□□ 0.02
LAMP3-202ENST00000466939 C8orf37Q96NL8 207 aa15.19■□□□□ 0.02
LAMP3-202ENST00000466939 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
LAMP3-202ENST00000466939 DCTPP1Q9H773 170 aa15.19■□□□□ 0.02
LAMP3-202ENST00000466939 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
LAMP3-202ENST00000466939 ERBB4Q15303 1308 aa15.18■□□□□ 0.02
LAMP3-202ENST00000466939 ALDH1L1O75891 902 aa15.18■□□□□ 0.02
LAMP3-202ENST00000466939 DDB1Q16531 1140 aa15.18■□□□□ 0.02
LAMP3-202ENST00000466939 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
LAMP3-202ENST00000466939 NGLY1Q96IV0 654 aa15.18■□□□□ 0.02
LAMP3-202ENST00000466939 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
LAMP3-202ENST00000466939 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
LAMP3-202ENST00000466939 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
LAMP3-202ENST00000466939 UNC5CLQ8IV45 518 aa15.17■□□□□ 0.02
LAMP3-202ENST00000466939 PIGBQ92521 554 aa15.17■□□□□ 0.02
LAMP3-202ENST00000466939 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
LAMP3-202ENST00000466939 ATP8B2P98198 1209 aa15.16■□□□□ 0.02
LAMP3-202ENST00000466939 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
LAMP3-202ENST00000466939 NPM2Q86SE8 214 aaKnown RBP15.16■□□□□ 0.02
LAMP3-202ENST00000466939 BARGINQ6ZT62 677 aa15.15■□□□□ 0.02
LAMP3-202ENST00000466939 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
LAMP3-202ENST00000466939 SYTL4Q96C24 671 aaPredicted RBP15.15■□□□□ 0.02
LAMP3-202ENST00000466939 C9orf78Q9NZ63 289 aaPredicted RBP15.15■□□□□ 0.02
LAMP3-202ENST00000466939 APBB1O00213 710 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 ASAP1Q9ULH1 1129 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 HDAC5Q9UQL6 1122 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 ITGB4P16144 1822 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 A0A0G2JS52 829 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 BCL9O00512 1426 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 CWF19L2Q2TBE0 894 aaKnown RBP15.14■□□□□ 0.01
LAMP3-202ENST00000466939 DOT1LQ8TEK3 1739 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
LAMP3-202ENST00000466939 BCL11AQ9H165 835 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 ATG3Q9NT62 314 aa15.14■□□□□ 0.01
LAMP3-202ENST00000466939 NBPF7P0C2Y1 421 aaPredicted RBP15.13■□□□□ 0.01
LAMP3-202ENST00000466939 VPS72Q15906 364 aa15.13■□□□□ 0.01
LAMP3-202ENST00000466939 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
LAMP3-202ENST00000466939 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
LAMP3-202ENST00000466939 LRP10Q7Z4F1 713 aa15.13■□□□□ 0.01
LAMP3-202ENST00000466939 MYD88Q99836 296 aa15.13■□□□□ 0.01
LAMP3-202ENST00000466939 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
LAMP3-202ENST00000466939 TEX13AQ9BXU3 409 aaPredicted RBP15.13■□□□□ 0.01
LAMP3-202ENST00000466939 PNMA6EA0A0J9YXQ4 647 aa15.12■□□□□ 0.01
LAMP3-202ENST00000466939 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
LAMP3-202ENST00000466939 NBPF14Q5TI25 921 aa15.12■□□□□ 0.01
LAMP3-202ENST00000466939 NBPF10Q6P3W6 841 aaKnown RBP15.12■□□□□ 0.01
LAMP3-202ENST00000466939 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
LAMP3-202ENST00000466939 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
LAMP3-202ENST00000466939 A1BGP04217 495 aa15.11■□□□□ 0.01
LAMP3-202ENST00000466939 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
LAMP3-202ENST00000466939 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
LAMP3-202ENST00000466939 PLBD2Q8NHP8 589 aa15.11■□□□□ 0.01
LAMP3-202ENST00000466939 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
LAMP3-202ENST00000466939 BCL9LQ86UU0 1499 aa15.11■□□□□ 0.01
LAMP3-202ENST00000466939 GRM8O00222 908 aa15.1■□□□□ 0.01
LAMP3-202ENST00000466939 SMARCA5O60264 1052 aaPredicted RBP15.1■□□□□ 0.01
LAMP3-202ENST00000466939 HSPA1LP34931 641 aa15.1■□□□□ 0.01
LAMP3-202ENST00000466939 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
LAMP3-202ENST00000466939 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms