RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ZDHHC3Q9NYG2 299 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
GTF3C3-209ENST00000466862 PHF24Q9UPV7 400 aa7□□□□□ -1.29
GTF3C3-209ENST00000466862 DNMT3AQ9Y6K1 912 aaPredicted RBP7□□□□□ -1.29
GTF3C3-209ENST00000466862 HOXB4P17483 251 aaPredicted RBP6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 FGFR3P22607 806 aa6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 MARSP56192 900 aaKnown RBP6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 CLDN10P78369 228 aa6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 TMEM132AQ24JP5 1023 aa6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 KANK3Q6NY19 840 aa6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 NLRP8Q86W28 1048 aa6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 SCARF2Q96GP6 870 aaPredicted RBP6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 NSFL1CQ9UNZ2 370 aaKnown RBP6.99□□□□□ -1.29
GTF3C3-209ENST00000466862 ATP9BO43861 1147 aa6.98□□□□□ -1.29
GTF3C3-209ENST00000466862 DKK1O94907 266 aa6.98□□□□□ -1.29
GTF3C3-209ENST00000466862 POTEAQ6S8J7 498 aa6.98□□□□□ -1.29
GTF3C3-209ENST00000466862 SLCO4C1Q6ZQN7 724 aa6.98□□□□□ -1.29
GTF3C3-209ENST00000466862 CLUAP1Q96AJ1 413 aa6.98□□□□□ -1.29
GTF3C3-209ENST00000466862 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 ITGB2P05107 769 aa6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 CTBSQ01459 385 aa6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 ZCCHC2Q9C0B9 1178 aaKnown RBP6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 ENAMQ9NRM1 1142 aa6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 CNTNAP5Q8WYK1 1306 aa6.97□□□□□ -1.29
GTF3C3-209ENST00000466862 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 BACH1O14867 736 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 FAM157BP0CG42 384 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 TXLNAP40222 546 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 TEAD4Q15561 434 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 NBPF1Q3BBV0 1214 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 FIGNL1Q6PIW4 674 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 PROSER2Q86WR7 435 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 SIX5Q8N196 739 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 C7orf43Q8WVR3 580 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 ZIC5Q96T25 663 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 GDF2Q9UK05 429 aaPredicted RBP6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 PCDHGC4Q9Y5F7 938 aa6.96□□□□□ -1.3
GTF3C3-209ENST00000466862 DCDC2BA2VCK2 349 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 EML1O00423 815 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 EFSO43281 561 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 TNP2Q05952 138 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 SH3PXD2AQ5TCZ1 1133 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 SLC9A9Q8IVB4 645 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 GOLGA6L1Q8N7Z2 621 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 GLMNQ92990 594 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 CABP1Q9NZU7 370 aa6.95□□□□□ -1.3
GTF3C3-209ENST00000466862 M0R2N6 131 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 ATXN7O15265 892 aaPredicted RBP6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 ARAFP10398 606 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 MAPTP10636 758 aaKnown RBP6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 BMP4P12644 408 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 PSME1Q06323 249 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 TRIM50Q86XT4 487 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 TNS4Q8IZW8 715 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 NEDD1Q8NHV4 660 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 TPCN2Q8NHX9 752 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 PARP3Q9Y6F1 533 aa6.94□□□□□ -1.3
GTF3C3-209ENST00000466862 TATP17735 454 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 HIRAP54198 1017 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 TBCELQ5QJ74 424 aa6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 AIDAQ96BJ3 306 aa6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 DCAF5Q96JK2 942 aa6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 KLF15Q9UIH9 416 aa6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 GGA1Q9UJY5 639 aa6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
GTF3C3-209ENST00000466862 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 IGHA1P01876 353 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 CD33P20138 364 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 PLA2G4EQ3MJ16 856 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 XP32Q5T750 250 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 OGFOD1Q8N543 542 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 GALNT6Q8NCL4 622 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 L3MBTL2Q969R5 705 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 MDFIQ99750 246 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 STRN4Q9NRL3 753 aa6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 GPC6Q9Y625 555 aaPredicted RBP6.92□□□□□ -1.3
GTF3C3-209ENST00000466862 A6NJR5 290 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 EPXP11678 715 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 NOS2P35228 1153 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 DGKGP49619 791 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 ARSJQ5FYB0 599 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 PODNQ7Z5L7 613 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 FCHSD1Q86WN1 690 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 LARGE2Q8N3Y3 721 aa6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
GTF3C3-209ENST00000466862 C21orf2O43822 256 aa6.9□□□□□ -1.3
GTF3C3-209ENST00000466862 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
GTF3C3-209ENST00000466862 MKRN1Q9UHC7 482 aaKnown RBP6.9□□□□□ -1.3
GTF3C3-209ENST00000466862 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
GTF3C3-209ENST00000466862 PROCP04070 461 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms