RNA–Protein interactions for RNA: ENST00000466635.1

SYP-203, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-203ENST00000466635 GNPATO15228 680 aa17.38■□□□□ 0.37
SYP-203ENST00000466635 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
SYP-203ENST00000466635 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
SYP-203ENST00000466635 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
SYP-203ENST00000466635 RREB1Q92766 1687 aa17.38■□□□□ 0.37
SYP-203ENST00000466635 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 ZNF827Q17R98 1081 aa17.37■□□□□ 0.37
SYP-203ENST00000466635 INTS5Q6P9B9 1019 aaKnown RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
SYP-203ENST00000466635 ANO8Q9HCE9 1232 aaPredicted RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
SYP-203ENST00000466635 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
SYP-203ENST00000466635 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
SYP-203ENST00000466635 TWISTNBQ3B726 338 aaPredicted RBP17.36■□□□□ 0.37
SYP-203ENST00000466635 HDGFL1Q5TGJ6 251 aa17.36■□□□□ 0.37
SYP-203ENST00000466635 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
SYP-203ENST00000466635 A1BGP04217 495 aa17.35■□□□□ 0.37
SYP-203ENST00000466635 SSFA2P28290 1259 aa17.35■□□□□ 0.37
SYP-203ENST00000466635 C5P01031 1676 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 R3HDM1Q15032 1099 aaKnown RBP17.34■□□□□ 0.37
SYP-203ENST00000466635 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 NUP188Q5SRE5 1749 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 CICQ96RK0 1608 aaPredicted RBP17.34■□□□□ 0.37
SYP-203ENST00000466635 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
SYP-203ENST00000466635 C4BP0C0L5 1744 aa17.33■□□□□ 0.37
SYP-203ENST00000466635 TJP1Q07157 1748 aa17.33■□□□□ 0.37
SYP-203ENST00000466635 PHF14O94880 888 aa17.33■□□□□ 0.36
SYP-203ENST00000466635 ADRA2BP18089 450 aa17.33■□□□□ 0.36
SYP-203ENST00000466635 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
SYP-203ENST00000466635 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.36
SYP-203ENST00000466635 A0A087WZG4 1122 aa17.32■□□□□ 0.36
SYP-203ENST00000466635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
SYP-203ENST00000466635 MSH5O43196 834 aa17.32■□□□□ 0.36
SYP-203ENST00000466635 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
SYP-203ENST00000466635 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
SYP-203ENST00000466635 VAMP4O75379 141 aa17.31■□□□□ 0.36
SYP-203ENST00000466635 MYL6BP14649 208 aa17.31■□□□□ 0.36
SYP-203ENST00000466635 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
SYP-203ENST00000466635 PNPLA7Q6ZV29 1317 aa17.3■□□□□ 0.36
SYP-203ENST00000466635 NBPF26B4DH59 902 aa17.3■□□□□ 0.36
SYP-203ENST00000466635 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
SYP-203ENST00000466635 RFC4P35249 363 aa17.3■□□□□ 0.36
SYP-203ENST00000466635 PIP4K2AP48426 406 aaPredicted RBP17.3■□□□□ 0.36
SYP-203ENST00000466635 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
SYP-203ENST00000466635 NBPF10Q6P3W6 841 aaKnown RBP17.3■□□□□ 0.36
SYP-203ENST00000466635 NBPF15Q8N660 670 aa17.3■□□□□ 0.36
SYP-203ENST00000466635 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYP-203ENST00000466635 COL5A3P25940 1745 aaPredicted RBP17.3■□□□□ 0.36
SYP-203ENST00000466635 TAF1LQ8IZX4 1826 aa17.29■□□□□ 0.36
SYP-203ENST00000466635 PSDA5PKW4 1024 aaPredicted RBP17.29■□□□□ 0.36
SYP-203ENST00000466635 COL23A1Q86Y22 540 aaPredicted RBP17.29■□□□□ 0.36
SYP-203ENST00000466635 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
SYP-203ENST00000466635 ZNF428Q96B54 188 aa17.29■□□□□ 0.36
SYP-203ENST00000466635 ARXQ96QS3 562 aa17.29■□□□□ 0.36
SYP-203ENST00000466635 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
SYP-203ENST00000466635 CHPF2Q9P2E5 772 aa17.29■□□□□ 0.36
SYP-203ENST00000466635 ZPR1O75312 459 aa17.28■□□□□ 0.36
SYP-203ENST00000466635 PDIA6Q15084 440 aa17.28■□□□□ 0.36
SYP-203ENST00000466635 SMIM5Q71RC9 77 aa17.28■□□□□ 0.36
SYP-203ENST00000466635 COL15A1P39059 1388 aa17.28■□□□□ 0.36
SYP-203ENST00000466635 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.36
SYP-203ENST00000466635 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
SYP-203ENST00000466635 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
SYP-203ENST00000466635 SLC16A10Q8TF71 515 aa17.26■□□□□ 0.35
SYP-203ENST00000466635 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
SYP-203ENST00000466635 ANXA1P04083 346 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 PROSER3Q2NL68 480 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 NARFQ9UHQ1 456 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
SYP-203ENST00000466635 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
SYP-203ENST00000466635 USP42Q9H9J4 1324 aaKnown RBP17.23■□□□□ 0.35
SYP-203ENST00000466635 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
SYP-203ENST00000466635 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
SYP-203ENST00000466635 LRP10Q7Z4F1 713 aa17.23■□□□□ 0.35
SYP-203ENST00000466635 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
SYP-203ENST00000466635 MYH14Q7Z406 1995 aaKnown RBP17.22■□□□□ 0.35
SYP-203ENST00000466635 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
SYP-203ENST00000466635 NLGN1Q8N2Q7 840 aa17.22■□□□□ 0.35
SYP-203ENST00000466635 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
SYP-203ENST00000466635 MTFR1LQ9H019 292 aa17.22■□□□□ 0.35
SYP-203ENST00000466635 SRP68Q9UHB9 627 aaKnown RBP17.22■□□□□ 0.35
SYP-203ENST00000466635 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
SYP-203ENST00000466635 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 RGL2O15211 777 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 DDX58O95786 925 aaKnown RBP17.21■□□□□ 0.35
SYP-203ENST00000466635 TTLL7Q6ZT98 887 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 PHAXQ9H814 394 aaKnown RBP17.21■□□□□ 0.35
SYP-203ENST00000466635 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 SRCAPQ6ZRS2 3230 aa17.21■□□□□ 0.35
SYP-203ENST00000466635 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
SYP-203ENST00000466635 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
SYP-203ENST00000466635 ZBTB7AO95365 584 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms