RNA–Protein interactions for RNA: ENST00000466267.1

COL9A2-206, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-206ENST00000466267 KDM3BQ7LBC6 1761 aa25.46■■□□□ 1.67
COL9A2-206ENST00000466267 COL15A1P39059 1388 aa25.46■■□□□ 1.67
COL9A2-206ENST00000466267 NFE2L2Q16236 605 aa25.46■■□□□ 1.67
COL9A2-206ENST00000466267 GPR162Q16538 588 aa25.46■■□□□ 1.67
COL9A2-206ENST00000466267 PRKRIP1Q9H875 184 aaPredicted RBP25.46■■□□□ 1.67
COL9A2-206ENST00000466267 PELP1Q8IZL8 1130 aaKnown RBP25.45■■□□□ 1.66
COL9A2-206ENST00000466267 FMNL2Q96PY5 1086 aa25.45■■□□□ 1.66
COL9A2-206ENST00000466267 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
COL9A2-206ENST00000466267 PRAMEF22A3QJZ6 481 aa25.44■■□□□ 1.66
COL9A2-206ENST00000466267 C10orf71Q711Q0 1435 aa25.44■■□□□ 1.66
COL9A2-206ENST00000466267 CANXP27824 592 aaKnown RBP25.43■■□□□ 1.66
COL9A2-206ENST00000466267 DDR1Q08345 913 aa25.43■■□□□ 1.66
COL9A2-206ENST00000466267 USPL1Q5W0Q7 1092 aa25.43■■□□□ 1.66
COL9A2-206ENST00000466267 THUMPD2Q9BTF0 503 aaKnown RBP25.43■■□□□ 1.66
COL9A2-206ENST00000466267 BCL2L12Q9HB09 334 aa25.43■■□□□ 1.66
COL9A2-206ENST00000466267 EIF5P55010 431 aaKnown RBP25.42■■□□□ 1.66
COL9A2-206ENST00000466267 ZNF784Q8NCA9 323 aaPredicted RBP25.42■■□□□ 1.66
COL9A2-206ENST00000466267 PXDNLA1KZ92 1463 aa25.41■■□□□ 1.66
COL9A2-206ENST00000466267 MIS18AQ9NYP9 233 aa25.41■■□□□ 1.66
COL9A2-206ENST00000466267 USP16Q9Y5T5 823 aa25.41■■□□□ 1.66
COL9A2-206ENST00000466267 AFDNP55196 1824 aaKnown RBP25.4■■□□□ 1.66
COL9A2-206ENST00000466267 SCN7AQ01118 1682 aa25.4■■□□□ 1.66
COL9A2-206ENST00000466267 STARD3NLO95772 234 aa25.4■■□□□ 1.66
COL9A2-206ENST00000466267 A1BGP04217 495 aa25.4■■□□□ 1.66
COL9A2-206ENST00000466267 TM4SF1P30408 202 aa25.4■■□□□ 1.66
COL9A2-206ENST00000466267 NARFQ9UHQ1 456 aa25.4■■□□□ 1.66
COL9A2-206ENST00000466267 BRCA1P38398 1863 aaKnown RBP25.39■■□□□ 1.66
COL9A2-206ENST00000466267 TAF7Q15545 349 aaPredicted RBP25.39■■□□□ 1.66
COL9A2-206ENST00000466267 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
COL9A2-206ENST00000466267 NRXN2Q9P2S2 1712 aa25.38■■□□□ 1.65
COL9A2-206ENST00000466267 TEX13AQ9BXU3 409 aaPredicted RBP25.38■■□□□ 1.65
COL9A2-206ENST00000466267 WWC3Q9ULE0 1092 aa25.38■■□□□ 1.65
COL9A2-206ENST00000466267 LAMB4A4D0S4 1761 aa25.37■■□□□ 1.65
COL9A2-206ENST00000466267 POLRMTO00411 1230 aaKnown RBP25.37■■□□□ 1.65
COL9A2-206ENST00000466267 NEFMP07197 916 aa25.37■■□□□ 1.65
COL9A2-206ENST00000466267 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
COL9A2-206ENST00000466267 PARP3Q9Y6F1 533 aa25.37■■□□□ 1.65
COL9A2-206ENST00000466267 ZPR1O75312 459 aa25.36■■□□□ 1.65
COL9A2-206ENST00000466267 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
COL9A2-206ENST00000466267 BCORQ6W2J9 1755 aa25.36■■□□□ 1.65
COL9A2-206ENST00000466267 PIP4K2AP48426 406 aaPredicted RBP25.35■■□□□ 1.65
COL9A2-206ENST00000466267 NFIXQ14938 502 aa25.35■■□□□ 1.65
COL9A2-206ENST00000466267 TMPOP42166 694 aaKnown RBP25.34■■□□□ 1.65
COL9A2-206ENST00000466267 ADAMTS8Q9UP79 889 aa25.34■■□□□ 1.65
COL9A2-206ENST00000466267 SNRPA1P09661 255 aaKnown RBP25.33■■□□□ 1.65
COL9A2-206ENST00000466267 IL6STP40189 918 aaPredicted RBP25.33■■□□□ 1.65
COL9A2-206ENST00000466267 A0A0G2JLW4 131 aa25.32■■□□□ 1.64
COL9A2-206ENST00000466267 RIPK4P57078 832 aa25.32■■□□□ 1.64
COL9A2-206ENST00000466267 RRP7AQ9Y3A4 280 aaKnown RBP25.32■■□□□ 1.64
COL9A2-206ENST00000466267 NBPF26B4DH59 902 aa25.31■■□□□ 1.64
COL9A2-206ENST00000466267 KCNA3P22001 575 aa25.31■■□□□ 1.64
COL9A2-206ENST00000466267 NBPF10Q6P3W6 841 aaKnown RBP25.31■■□□□ 1.64
COL9A2-206ENST00000466267 NBPF15Q8N660 670 aa25.31■■□□□ 1.64
COL9A2-206ENST00000466267 TBC1D2BQ9UPU7 963 aa25.31■■□□□ 1.64
COL9A2-206ENST00000466267 ZNF316A6NFI3 1004 aaPredicted RBP25.3■■□□□ 1.64
COL9A2-206ENST00000466267 DPEP1P16444 411 aa25.3■■□□□ 1.64
COL9A2-206ENST00000466267 EIF4A1P60842 406 aaKnown RBP25.3■■□□□ 1.64
COL9A2-206ENST00000466267 TGFB2P61812 414 aa25.3■■□□□ 1.64
COL9A2-206ENST00000466267 CCDC184Q52MB2 194 aa25.3■■□□□ 1.64
COL9A2-206ENST00000466267 A0A087WZG4 1122 aa25.29■■□□□ 1.64
COL9A2-206ENST00000466267 GRIN3BO60391 1043 aa25.29■■□□□ 1.64
COL9A2-206ENST00000466267 PNISRQ8TF01 805 aaKnown RBP25.29■■□□□ 1.64
COL9A2-206ENST00000466267 ZNF330Q9Y3S2 320 aaPredicted RBP25.29■■□□□ 1.64
COL9A2-206ENST00000466267 CAMTA2O94983 1202 aa25.28■■□□□ 1.64
COL9A2-206ENST00000466267 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
COL9A2-206ENST00000466267 RUNDC1Q96C34 613 aa25.28■■□□□ 1.64
COL9A2-206ENST00000466267 GIGYF1O75420 1035 aaPredicted RBP25.27■■□□□ 1.64
COL9A2-206ENST00000466267 TBC1D9BQ66K14 1250 aa25.27■■□□□ 1.64
COL9A2-206ENST00000466267 TRIM35Q9UPQ4 493 aa25.27■■□□□ 1.64
COL9A2-206ENST00000466267 ANKRD31Q8N7Z5 1873 aa25.27■■□□□ 1.64
COL9A2-206ENST00000466267 CARMIL3Q8ND23 1372 aa25.26■■□□□ 1.63
COL9A2-206ENST00000466267 SERPINB2P05120 415 aa25.25■■□□□ 1.63
COL9A2-206ENST00000466267 ARFGEF1Q9Y6D6 1849 aa25.25■■□□□ 1.63
COL9A2-206ENST00000466267 DLEC1Q9Y238 1755 aa25.24■■□□□ 1.63
COL9A2-206ENST00000466267 NEUROD2Q15784 382 aa25.24■■□□□ 1.63
COL9A2-206ENST00000466267 BICDL1Q6ZP65 573 aa25.24■■□□□ 1.63
COL9A2-206ENST00000466267 DZIP3Q86Y13 1208 aaKnown RBP25.24■■□□□ 1.63
COL9A2-206ENST00000466267 CHRNA5P30532 468 aa25.23■■□□□ 1.63
COL9A2-206ENST00000466267 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
COL9A2-206ENST00000466267 LMOD3Q0VAK6 560 aa25.2■■□□□ 1.62
COL9A2-206ENST00000466267 BCS1LQ9Y276 419 aa25.2■■□□□ 1.62
COL9A2-206ENST00000466267 COL11A2P13942 1736 aaPredicted RBP25.19■■□□□ 1.62
COL9A2-206ENST00000466267 ADCY9O60503 1353 aa25.18■■□□□ 1.62
COL9A2-206ENST00000466267 SENP3-EIF4A1A0A087X0R7 540 aa25.17■■□□□ 1.62
COL9A2-206ENST00000466267 C1QTNF8P60827 252 aa25.17■■□□□ 1.62
COL9A2-206ENST00000466267 CCDC24Q8N4L8 307 aa25.17■■□□□ 1.62
COL9A2-206ENST00000466267 BABAM1Q9NWV8 329 aa25.17■■□□□ 1.62
COL9A2-206ENST00000466267 NUP98P52948 1817 aa25.16■■□□□ 1.62
COL9A2-206ENST00000466267 CHL1O00533 1208 aa25.16■■□□□ 1.62
COL9A2-206ENST00000466267 PRR5LQ6MZQ0 368 aa25.16■■□□□ 1.62
COL9A2-206ENST00000466267 APAF1O14727 1248 aa25.15■■□□□ 1.62
COL9A2-206ENST00000466267 HLFQ16534 295 aa25.15■■□□□ 1.62
COL9A2-206ENST00000466267 KRT24Q2M2I5 525 aa25.15■■□□□ 1.62
COL9A2-206ENST00000466267 LRP10Q7Z4F1 713 aa25.15■■□□□ 1.62
COL9A2-206ENST00000466267 PIM2Q9P1W9 311 aa25.15■■□□□ 1.62
COL9A2-206ENST00000466267 PDIA6Q15084 440 aa25.13■■□□□ 1.61
COL9A2-206ENST00000466267 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
COL9A2-206ENST00000466267 TTLL7Q6ZT98 887 aa25.13■■□□□ 1.61
COL9A2-206ENST00000466267 NPM2Q86SE8 214 aaKnown RBP25.13■■□□□ 1.61
COL9A2-206ENST00000466267 NGEFQ8N5V2 710 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms