RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 CLSPNQ9HAW4 1339 aa14.98□□□□□ -0.01
CSF3R-208ENST00000466138 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
CSF3R-208ENST00000466138 ASAP1Q9ULH1 1129 aa14.98□□□□□ -0.01
CSF3R-208ENST00000466138 POLRMTO00411 1230 aaKnown RBP14.97□□□□□ -0.01
CSF3R-208ENST00000466138 SAPCD2Q86UD0 394 aa14.97□□□□□ -0.01
CSF3R-208ENST00000466138 SYNE4Q8N205 404 aa14.97□□□□□ -0.01
CSF3R-208ENST00000466138 ZNF622Q969S3 477 aaKnown RBP eCLIP14.96□□□□□ -0.01
CSF3R-208ENST00000466138 ZNF408Q9H9D4 720 aa14.96□□□□□ -0.01
CSF3R-208ENST00000466138 RAPGEFL1Q9UHV5 662 aa14.96□□□□□ -0.01
CSF3R-208ENST00000466138 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.02
CSF3R-208ENST00000466138 MAP2P11137 1827 aaKnown RBP14.95□□□□□ -0.02
CSF3R-208ENST00000466138 CELF2O95319 508 aaKnown RBP14.95□□□□□ -0.02
CSF3R-208ENST00000466138 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
CSF3R-208ENST00000466138 CCER1Q8TC90 406 aaPredicted RBP14.95□□□□□ -0.02
CSF3R-208ENST00000466138 MKI67P46013 3256 aaKnown RBP14.95□□□□□ -0.02
CSF3R-208ENST00000466138 POTEFA5A3E0 1075 aa14.94□□□□□ -0.02
CSF3R-208ENST00000466138 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
CSF3R-208ENST00000466138 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 H0YIN7 160 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 ADRA2BP18089 450 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 COL9A1P20849 921 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 PRDM6Q9NQX0 595 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
CSF3R-208ENST00000466138 NME9Q86XW9 330 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
CSF3R-208ENST00000466138 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 ITGB4P16144 1822 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
CSF3R-208ENST00000466138 FAM208AQ9UK61 1670 aaKnown RBP14.91□□□□□ -0.02
CSF3R-208ENST00000466138 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
CSF3R-208ENST00000466138 NOGQ13253 232 aa14.91□□□□□ -0.02
CSF3R-208ENST00000466138 CCDC24Q8N4L8 307 aa14.91□□□□□ -0.02
CSF3R-208ENST00000466138 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
CSF3R-208ENST00000466138 TATP17735 454 aaPredicted RBP14.9□□□□□ -0.02
CSF3R-208ENST00000466138 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
CSF3R-208ENST00000466138 IP6K1Q92551 441 aa14.9□□□□□ -0.02
CSF3R-208ENST00000466138 RGPD2P0DJD1 1756 aa14.9□□□□□ -0.02
CSF3R-208ENST00000466138 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
CSF3R-208ENST00000466138 USP31Q70CQ4 1352 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 H0YGN5 161 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 CYP27B1O15528 508 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 OTUD5Q96G74 571 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 SAGE1Q9NXZ1 904 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 TMOD3Q9NYL9 352 aa14.89□□□□□ -0.03
CSF3R-208ENST00000466138 RBM27Q9P2N5 1060 aaKnown RBP14.89□□□□□ -0.03
CSF3R-208ENST00000466138 TM4SF1P30408 202 aa14.88□□□□□ -0.03
CSF3R-208ENST00000466138 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
CSF3R-208ENST00000466138 USP42Q9H9J4 1324 aaKnown RBP14.88□□□□□ -0.03
CSF3R-208ENST00000466138 TRPM7Q96QT4 1865 aa14.87□□□□□ -0.03
CSF3R-208ENST00000466138 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
CSF3R-208ENST00000466138 PKN2Q16513 984 aaKnown RBP14.87□□□□□ -0.03
CSF3R-208ENST00000466138 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
CSF3R-208ENST00000466138 FER1L6Q2WGJ9 1857 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
CSF3R-208ENST00000466138 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 ATG3Q9NT62 314 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 GJA3Q9Y6H8 435 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 LTBP3Q9NS15 1303 aa14.86□□□□□ -0.03
CSF3R-208ENST00000466138 DLEC1Q9Y238 1755 aa14.85□□□□□ -0.03
CSF3R-208ENST00000466138 ZNF277Q9NRM2 450 aaPredicted RBP14.85□□□□□ -0.03
CSF3R-208ENST00000466138 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
CSF3R-208ENST00000466138 RC3H1Q5TC82 1133 aaKnown RBP14.84□□□□□ -0.03
CSF3R-208ENST00000466138 USPL1Q5W0Q7 1092 aa14.84□□□□□ -0.03
CSF3R-208ENST00000466138 HHIPL1Q96JK4 782 aa14.84□□□□□ -0.03
CSF3R-208ENST00000466138 GLIS2Q9BZE0 524 aaPredicted RBP14.84□□□□□ -0.03
CSF3R-208ENST00000466138 SERPINB2P05120 415 aa14.83□□□□□ -0.04
CSF3R-208ENST00000466138 EN2P19622 333 aaPredicted RBP14.83□□□□□ -0.04
CSF3R-208ENST00000466138 FBLN1P23142 703 aa14.83□□□□□ -0.04
CSF3R-208ENST00000466138 LMOD1P29536 600 aaPredicted RBP14.83□□□□□ -0.04
CSF3R-208ENST00000466138 EPS15P42566 896 aa14.83□□□□□ -0.04
CSF3R-208ENST00000466138 HUNKP57058 714 aa14.83□□□□□ -0.04
CSF3R-208ENST00000466138 CNTNAP4Q9C0A0 1308 aa14.83□□□□□ -0.04
CSF3R-208ENST00000466138 CD163L1Q9NR16 1453 aa14.82□□□□□ -0.04
CSF3R-208ENST00000466138 AMPHP49418 695 aa14.82□□□□□ -0.04
CSF3R-208ENST00000466138 NFIXQ14938 502 aa14.82□□□□□ -0.04
CSF3R-208ENST00000466138 FBXO46Q6PJ61 603 aaPredicted RBP14.82□□□□□ -0.04
CSF3R-208ENST00000466138 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
CSF3R-208ENST00000466138 ZNF296Q8WUU4 475 aaPredicted RBP14.81□□□□□ -0.04
CSF3R-208ENST00000466138 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
CSF3R-208ENST00000466138 TIMELESSQ9UNS1 1208 aa14.81□□□□□ -0.04
CSF3R-208ENST00000466138 CGNL1Q0VF96 1302 aa14.81□□□□□ -0.04
CSF3R-208ENST00000466138 ZPR1O75312 459 aa14.8□□□□□ -0.04
CSF3R-208ENST00000466138 HOXC9P31274 260 aa14.8□□□□□ -0.04
CSF3R-208ENST00000466138 FAM122AQ96E09 287 aa14.8□□□□□ -0.04
CSF3R-208ENST00000466138 CENPJQ9HC77 1338 aaPredicted RBP14.8□□□□□ -0.04
CSF3R-208ENST00000466138 SMG6Q86US8 1419 aaKnown RBP14.8□□□□□ -0.04
CSF3R-208ENST00000466138 AFDNP55196 1824 aaKnown RBP14.8□□□□□ -0.04
CSF3R-208ENST00000466138 FAM155AB1AL88 458 aaPredicted RBP14.79□□□□□ -0.04
CSF3R-208ENST00000466138 SOX1O00570 391 aaPredicted RBP14.79□□□□□ -0.04
CSF3R-208ENST00000466138 PLA2G5P39877 138 aa14.79□□□□□ -0.04
CSF3R-208ENST00000466138 KDRP35968 1356 aa14.78□□□□□ -0.04
CSF3R-208ENST00000466138 TBC1D8O95759 1140 aa14.78□□□□□ -0.04
CSF3R-208ENST00000466138 CRKLP46109 303 aaKnown RBP14.78□□□□□ -0.04
CSF3R-208ENST00000466138 GPC2Q8N158 579 aa14.78□□□□□ -0.04
CSF3R-208ENST00000466138 UNC80Q8N2C7 3258 aa14.77□□□□□ -0.04
CSF3R-208ENST00000466138 DLK2Q6UY11 383 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms