RNA–Protein interactions for RNA: ENST00000465997.1

SNX21-207, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-207ENST00000465997 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
SNX21-207ENST00000465997 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
SNX21-207ENST00000465997 PARP3Q9Y6F1 533 aa18.32■□□□□ 0.52
SNX21-207ENST00000465997 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
SNX21-207ENST00000465997 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
SNX21-207ENST00000465997 SNRPA1P09661 255 aaKnown RBP18.3■□□□□ 0.52
SNX21-207ENST00000465997 TGFB2P61812 414 aa18.3■□□□□ 0.52
SNX21-207ENST00000465997 COL15A1P39059 1388 aa18.3■□□□□ 0.52
SNX21-207ENST00000465997 IL6STP40189 918 aaPredicted RBP18.29■□□□□ 0.52
SNX21-207ENST00000465997 EIF5P55010 431 aaKnown RBP18.29■□□□□ 0.52
SNX21-207ENST00000465997 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
SNX21-207ENST00000465997 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
SNX21-207ENST00000465997 DLG5Q8TDM6 1919 aa18.28■□□□□ 0.52
SNX21-207ENST00000465997 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
SNX21-207ENST00000465997 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
SNX21-207ENST00000465997 FKBP8Q14318 412 aa18.28■□□□□ 0.52
SNX21-207ENST00000465997 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
SNX21-207ENST00000465997 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
SNX21-207ENST00000465997 KCNQ3O43525 872 aa18.27■□□□□ 0.52
SNX21-207ENST00000465997 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SNX21-207ENST00000465997 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.52
SNX21-207ENST00000465997 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
SNX21-207ENST00000465997 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
SNX21-207ENST00000465997 CHD4Q14839 1912 aa18.26■□□□□ 0.51
SNX21-207ENST00000465997 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
SNX21-207ENST00000465997 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
SNX21-207ENST00000465997 RIPK4P57078 832 aa18.25■□□□□ 0.51
SNX21-207ENST00000465997 RUNDC1Q96C34 613 aa18.25■□□□□ 0.51
SNX21-207ENST00000465997 C10orf71Q711Q0 1435 aa18.24■□□□□ 0.51
SNX21-207ENST00000465997 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
SNX21-207ENST00000465997 A1BGP04217 495 aa18.23■□□□□ 0.51
SNX21-207ENST00000465997 YBX3P16989 372 aaKnown RBP eCLIP18.23■□□□□ 0.51
SNX21-207ENST00000465997 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
SNX21-207ENST00000465997 POLRMTO00411 1230 aaKnown RBP18.22■□□□□ 0.51
SNX21-207ENST00000465997 DDR1Q08345 913 aa18.22■□□□□ 0.51
SNX21-207ENST00000465997 RGL2O15211 777 aa18.21■□□□□ 0.51
SNX21-207ENST00000465997 NFIXQ14938 502 aa18.21■□□□□ 0.51
SNX21-207ENST00000465997 BCL2L12Q9HB09 334 aa18.21■□□□□ 0.51
SNX21-207ENST00000465997 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
SNX21-207ENST00000465997 KDM3BQ7LBC6 1761 aa18.2■□□□□ 0.5
SNX21-207ENST00000465997 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
SNX21-207ENST00000465997 MIS18AQ9NYP9 233 aa18.2■□□□□ 0.5
SNX21-207ENST00000465997 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
SNX21-207ENST00000465997 GIGYF1O75420 1035 aaPredicted RBP18.19■□□□□ 0.5
SNX21-207ENST00000465997 CLEC4GQ6UXB4 293 aa18.19■□□□□ 0.5
SNX21-207ENST00000465997 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
SNX21-207ENST00000465997 A0A0G2JLW4 131 aa18.18■□□□□ 0.5
SNX21-207ENST00000465997 SERPINB2P05120 415 aa18.18■□□□□ 0.5
SNX21-207ENST00000465997 DZIP3Q86Y13 1208 aaKnown RBP18.18■□□□□ 0.5
SNX21-207ENST00000465997 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
SNX21-207ENST00000465997 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
SNX21-207ENST00000465997 PRAMEF22A3QJZ6 481 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 DPEP1P16444 411 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 ZNF652Q9Y2D9 606 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 NRXN2Q9P2S2 1712 aa18.17■□□□□ 0.5
SNX21-207ENST00000465997 SCN7AQ01118 1682 aa18.16■□□□□ 0.5
SNX21-207ENST00000465997 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
SNX21-207ENST00000465997 LAMB4A4D0S4 1761 aa18.15■□□□□ 0.5
SNX21-207ENST00000465997 N4BP2Q86UW6 1770 aaPredicted RBP18.15■□□□□ 0.5
SNX21-207ENST00000465997 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
SNX21-207ENST00000465997 ERBB4Q15303 1308 aa18.15■□□□□ 0.5
SNX21-207ENST00000465997 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
SNX21-207ENST00000465997 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
SNX21-207ENST00000465997 KCNA3P22001 575 aa18.14■□□□□ 0.49
SNX21-207ENST00000465997 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
SNX21-207ENST00000465997 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
SNX21-207ENST00000465997 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
SNX21-207ENST00000465997 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
SNX21-207ENST00000465997 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.49
SNX21-207ENST00000465997 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.49
SNX21-207ENST00000465997 ANP32CO43423 234 aa18.13■□□□□ 0.49
SNX21-207ENST00000465997 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
SNX21-207ENST00000465997 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
SNX21-207ENST00000465997 BCS1LQ9Y276 419 aa18.13■□□□□ 0.49
SNX21-207ENST00000465997 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
SNX21-207ENST00000465997 CHL1O00533 1208 aa18.12■□□□□ 0.49
SNX21-207ENST00000465997 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
SNX21-207ENST00000465997 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
SNX21-207ENST00000465997 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
SNX21-207ENST00000465997 PDE6BP35913 854 aa18.11■□□□□ 0.49
SNX21-207ENST00000465997 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
SNX21-207ENST00000465997 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
SNX21-207ENST00000465997 BRIP1Q9BX63 1249 aa18.11■□□□□ 0.49
SNX21-207ENST00000465997 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
SNX21-207ENST00000465997 H0YIN7 160 aa18.1■□□□□ 0.49
SNX21-207ENST00000465997 UTRNP46939 3433 aa18.1■□□□□ 0.49
SNX21-207ENST00000465997 ST5P78524 1137 aa18.09■□□□□ 0.49
SNX21-207ENST00000465997 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
SNX21-207ENST00000465997 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
SNX21-207ENST00000465997 ARFGEF1Q9Y6D6 1849 aa18.09■□□□□ 0.49
SNX21-207ENST00000465997 APAF1O14727 1248 aa18.08■□□□□ 0.48
SNX21-207ENST00000465997 NPHP1O15259 732 aa18.08■□□□□ 0.48
SNX21-207ENST00000465997 HOXB7P09629 217 aa18.08■□□□□ 0.48
SNX21-207ENST00000465997 CHRNA5P30532 468 aa18.08■□□□□ 0.48
SNX21-207ENST00000465997 PRR5LQ6MZQ0 368 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms