RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 ABL2P42684 1182 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 TRAIPQ9BWF2 469 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 BRD4O60885 1362 aaPredicted RBP10.36□□□□□ -0.75
VPS8-218ENST00000465818 NSD2O96028 1365 aa10.36□□□□□ -0.75
VPS8-218ENST00000465818 COL22A1Q8NFW1 1626 aaPredicted RBP10.36□□□□□ -0.75
VPS8-218ENST00000465818 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
VPS8-218ENST00000465818 HOXA2O43364 376 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 KDM4AO75164 1064 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 IRF5Q13568 498 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 DIEXFQ68CQ4 756 aaKnown RBP10.35□□□□□ -0.75
VPS8-218ENST00000465818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS8-218ENST00000465818 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 HMX1Q9NP08 348 aaPredicted RBP10.35□□□□□ -0.75
VPS8-218ENST00000465818 KNSTRNQ9Y448 316 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 SBNO1A3KN83 1393 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
VPS8-218ENST00000465818 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
VPS8-218ENST00000465818 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 SLIT3O75094 1523 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 GCGRP47871 477 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 PSME1Q06323 249 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
VPS8-218ENST00000465818 PACS2Q86VP3 889 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 NME9Q86XW9 330 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 RETREG2Q8NC44 543 aa10.34□□□□□ -0.75
VPS8-218ENST00000465818 NFAT5O94916 1531 aa10.33□□□□□ -0.76
VPS8-218ENST00000465818 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
VPS8-218ENST00000465818 CC2D1BQ5T0F9 858 aaKnown RBP10.33□□□□□ -0.76
VPS8-218ENST00000465818 PRPF38BQ5VTL8 546 aaKnown RBP10.33□□□□□ -0.76
VPS8-218ENST00000465818 KRT28Q7Z3Y7 464 aa10.33□□□□□ -0.76
VPS8-218ENST00000465818 RDH13Q8NBN7 331 aa10.33□□□□□ -0.76
VPS8-218ENST00000465818 GLMNQ92990 594 aa10.33□□□□□ -0.76
VPS8-218ENST00000465818 PARD3Q8TEW0 1356 aa10.33□□□□□ -0.76
VPS8-218ENST00000465818 SOS2Q07890 1332 aaPredicted RBP10.33□□□□□ -0.76
VPS8-218ENST00000465818 HOXB1P14653 301 aaPredicted RBP10.32□□□□□ -0.76
VPS8-218ENST00000465818 KCNK17Q96T54 332 aa10.32□□□□□ -0.76
VPS8-218ENST00000465818 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
VPS8-218ENST00000465818 GGNBP2Q9H3C7 697 aa10.32□□□□□ -0.76
VPS8-218ENST00000465818 PEAK1Q9H792 1746 aa10.32□□□□□ -0.76
VPS8-218ENST00000465818 ARHGEF10O15013 1369 aa10.31□□□□□ -0.76
VPS8-218ENST00000465818 CTDSPL2Q05D32 466 aa10.31□□□□□ -0.76
VPS8-218ENST00000465818 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
VPS8-218ENST00000465818 KIAA1468Q9P260 1216 aa10.31□□□□□ -0.76
VPS8-218ENST00000465818 SPATA31A3Q5VYP0 1347 aa10.31□□□□□ -0.76
VPS8-218ENST00000465818 USP31Q70CQ4 1352 aa10.3□□□□□ -0.76
VPS8-218ENST00000465818 RGPD5Q99666 1765 aa10.3□□□□□ -0.76
VPS8-218ENST00000465818 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
VPS8-218ENST00000465818 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
VPS8-218ENST00000465818 FYB1O15117 783 aa10.3□□□□□ -0.76
VPS8-218ENST00000465818 NUTM2GQ5VZR2 741 aa10.3□□□□□ -0.76
VPS8-218ENST00000465818 POTEEQ6S8J3 1075 aa10.3□□□□□ -0.76
VPS8-218ENST00000465818 NUTM2AQ8IVF1 878 aaPredicted RBP10.3□□□□□ -0.76
VPS8-218ENST00000465818 PNPLA6Q8IY17 1366 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 ZBTB7CA1YPR0 619 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 FDX1P10109 184 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
VPS8-218ENST00000465818 ABTB2Q8N961 1025 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
VPS8-218ENST00000465818 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 USP19O94966 1318 aa10.29□□□□□ -0.76
VPS8-218ENST00000465818 SMG6Q86US8 1419 aaKnown RBP10.28□□□□□ -0.76
VPS8-218ENST00000465818 ANP32CO43423 234 aa10.28□□□□□ -0.76
VPS8-218ENST00000465818 PSEN2P49810 448 aa10.28□□□□□ -0.76
VPS8-218ENST00000465818 COG3Q96JB2 828 aa10.28□□□□□ -0.76
VPS8-218ENST00000465818 PRKRIP1Q9H875 184 aaPredicted RBP10.28□□□□□ -0.76
VPS8-218ENST00000465818 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
VPS8-218ENST00000465818 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
VPS8-218ENST00000465818 MORC1Q86VD1 984 aa10.27□□□□□ -0.77
VPS8-218ENST00000465818 CDK12Q9NYV4 1490 aaPredicted RBP10.27□□□□□ -0.77
VPS8-218ENST00000465818 COL18A1P39060 1754 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 LMO7Q8WWI1 1683 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 USP46P62068 366 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 EPS8L1Q8TE68 723 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 ABCC6O95255 1503 aa10.26□□□□□ -0.77
VPS8-218ENST00000465818 MYBBP1AQ9BQG0 1328 aaKnown RBP10.26□□□□□ -0.77
VPS8-218ENST00000465818 FAM208AQ9UK61 1670 aaKnown RBP10.25□□□□□ -0.77
VPS8-218ENST00000465818 COL3A1P02461 1466 aaPredicted RBP10.25□□□□□ -0.77
VPS8-218ENST00000465818 RGPD2P0DJD1 1756 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 COL14A1Q05707 1796 aaKnown RBP10.25□□□□□ -0.77
VPS8-218ENST00000465818 RALBP1Q15311 655 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 SCUBE2Q9NQ36 999 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
VPS8-218ENST00000465818 NDUFB9Q9Y6M9 179 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 AATKQ6ZMQ8 1374 aa10.25□□□□□ -0.77
VPS8-218ENST00000465818 HSPA1LP34931 641 aa10.24□□□□□ -0.77
VPS8-218ENST00000465818 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
VPS8-218ENST00000465818 LRRC59Q96AG4 307 aaKnown RBP10.24□□□□□ -0.77
VPS8-218ENST00000465818 JCADQ9P266 1359 aa10.24□□□□□ -0.77
VPS8-218ENST00000465818 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
VPS8-218ENST00000465818 LRP6O75581 1613 aa10.23□□□□□ -0.77
VPS8-218ENST00000465818 FBLN1P23142 703 aa10.23□□□□□ -0.77
VPS8-218ENST00000465818 PPP2R1AP30153 589 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms