RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 A0A1W2PNR3 127 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 POM121CA8CG34 1229 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 BACH1O14867 736 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 BMP4P12644 408 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
SNX4-202ENST00000465505 GTF2IP78347 998 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 FOXK2Q01167 660 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 SUZ12Q15022 739 aaKnown RBP6.49□□□□□ -1.37
SNX4-202ENST00000465505 GPAT2Q6NUI2 795 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 PODNQ7Z5L7 613 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 DEPDC4Q8N2C3 294 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.49□□□□□ -1.37
SNX4-202ENST00000465505 DCAF5Q96JK2 942 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 ZNF358Q9NW07 568 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 ZDHHC3Q9NYG2 299 aa6.49□□□□□ -1.37
SNX4-202ENST00000465505 USP17L5A8MUK1 530 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 ZBTB7BO15156 539 aaPredicted RBP6.48□□□□□ -1.37
SNX4-202ENST00000465505 IGHA1P01876 353 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 UBTFP17480 764 aaKnown RBP6.48□□□□□ -1.37
SNX4-202ENST00000465505 TNP2Q05952 138 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 ARSJQ5FYB0 599 aaPredicted RBP6.48□□□□□ -1.37
SNX4-202ENST00000465505 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 CABP1Q9NZU7 370 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 SCHIP1Q9P0W5 487 aaPredicted RBP6.48□□□□□ -1.37
SNX4-202ENST00000465505 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
SNX4-202ENST00000465505 ATXN7O15265 892 aaPredicted RBP6.47□□□□□ -1.37
SNX4-202ENST00000465505 ITGB2P05107 769 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
SNX4-202ENST00000465505 HOXB4P17483 251 aaPredicted RBP6.47□□□□□ -1.37
SNX4-202ENST00000465505 EPHA4P54764 986 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 NBPF1Q3BBV0 1214 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 ZDHHC1Q8WTX9 485 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 PARP3Q9Y6F1 533 aa6.47□□□□□ -1.37
SNX4-202ENST00000465505 LOC100996750A0A140TA64 210 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 ARAFP10398 606 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 TATP17735 454 aaPredicted RBP6.46□□□□□ -1.38
SNX4-202ENST00000465505 PLA2G4EQ3MJ16 856 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 FAM182BQ5T319 152 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 SLCO4C1Q6ZQN7 724 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 C7orf43Q8WVR3 580 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 UCN2Q96RP3 112 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
SNX4-202ENST00000465505 EPXP11678 715 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 NOS2P35228 1153 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 TXLNAP40222 546 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 PSME1Q06323 249 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 TEAD4Q15561 434 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 PLEKHM2Q8IWE5 1019 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 L3MBTL2Q969R5 705 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 BTBD6Q96KE9 485 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 KLF15Q9UIH9 416 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 MKL2Q9ULH7 1088 aa6.45□□□□□ -1.38
SNX4-202ENST00000465505 DCDC2BA2VCK2 349 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 NEURL1BA8MQ27 555 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 KHNYNO15037 678 aaKnown RBP6.44□□□□□ -1.38
SNX4-202ENST00000465505 FAM157BP0CG42 384 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 CD33P20138 364 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 LINC00114Q6XXX2 140 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 TRIM50Q86XT4 487 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 RRAGCQ9HB90 399 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 KIAA1024Q9UPX6 916 aa6.44□□□□□ -1.38
SNX4-202ENST00000465505 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 EML1O00423 815 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 ATP9BO43861 1147 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 COL8A1P27658 744 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 CLDN10P78369 228 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 TBCELQ5QJ74 424 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 SAMD5Q5TGI4 173 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 BICDL1Q6ZP65 573 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 TPCN2Q8NHX9 752 aa6.43□□□□□ -1.38
SNX4-202ENST00000465505 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 MSTNO14793 375 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 EFSO43281 561 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 AMPD1P23109 780 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 CCDC102BQ68D86 513 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 FNBP4Q8N3X1 1017 aaPredicted RBP6.42□□□□□ -1.38
SNX4-202ENST00000465505 AVENQ9NQS1 362 aaPredicted RBP6.42□□□□□ -1.38
SNX4-202ENST00000465505 STRN4Q9NRL3 753 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 GJA3Q9Y6H8 435 aa6.42□□□□□ -1.38
SNX4-202ENST00000465505 ATP1A2P50993 1020 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 SH3PXD2AQ5TCZ1 1133 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 FCHSD1Q86WN1 690 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 LARGE2Q8N3Y3 721 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 SPOCK3Q9BQ16 436 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 MARK1Q9P0L2 795 aa6.41□□□□□ -1.38
SNX4-202ENST00000465505 MKRN1Q9UHC7 482 aaKnown RBP6.41□□□□□ -1.38
SNX4-202ENST00000465505 SERTM1A2A2V5 107 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 M0R2N6 131 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 DKK1O94907 266 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 PROCP04070 461 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 ADH6P28332 368 aa6.4□□□□□ -1.38
SNX4-202ENST00000465505 DGKGP49619 791 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms