RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 SOX11P35716 441 aa8.8□□□□□ -1
VPS8-217ENST00000465213 DGKGP49619 791 aa8.8□□□□□ -1
VPS8-217ENST00000465213 MTFR1Q15390 333 aa8.8□□□□□ -1
VPS8-217ENST00000465213 FAM182BQ5T319 152 aa8.8□□□□□ -1
VPS8-217ENST00000465213 BTBD6Q96KE9 485 aa8.8□□□□□ -1
VPS8-217ENST00000465213 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
VPS8-217ENST00000465213 GNB5O14775 395 aa8.79□□□□□ -1
VPS8-217ENST00000465213 BAG6P46379 1132 aa8.79□□□□□ -1
VPS8-217ENST00000465213 GDPD2Q9HCC8 539 aa8.79□□□□□ -1
VPS8-217ENST00000465213 AVENQ9NQS1 362 aaPredicted RBP8.79□□□□□ -1
VPS8-217ENST00000465213 HCN2Q9UL51 889 aa8.79□□□□□ -1
VPS8-217ENST00000465213 IQSEC3Q9UPP2 1182 aaPredicted RBP8.79□□□□□ -1
VPS8-217ENST00000465213 TMEM229AB2RXF0 380 aa8.78□□□□□ -1
VPS8-217ENST00000465213 K7ELQ4 463 aaPredicted RBP8.78□□□□□ -1
VPS8-217ENST00000465213 CDK2AP1O14519 115 aa8.78□□□□□ -1
VPS8-217ENST00000465213 ATXN7O15265 892 aaPredicted RBP8.78□□□□□ -1
VPS8-217ENST00000465213 AMPD1P23109 780 aa8.78□□□□□ -1
VPS8-217ENST00000465213 TNP2Q05952 138 aa8.78□□□□□ -1
VPS8-217ENST00000465213 MCM6Q14566 821 aa8.78□□□□□ -1
VPS8-217ENST00000465213 SUV39H2Q9H5I1 410 aa8.78□□□□□ -1
VPS8-217ENST00000465213 ZDHHC3Q9NYG2 299 aa8.78□□□□□ -1
VPS8-217ENST00000465213 NBPF1Q3BBV0 1214 aa8.77□□□□□ -1.01
VPS8-217ENST00000465213 A0A1W2PNR3 127 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 A6NJY4 79 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 NEURL1BA8MQ27 555 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 MAPTP10636 758 aaKnown RBP8.76□□□□□ -1.01
VPS8-217ENST00000465213 ADH6P28332 368 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 XP32Q5T750 250 aa8.76□□□□□ -1.01
VPS8-217ENST00000465213 FAM157BP0CG42 384 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 ABL2P42684 1182 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 SEMA3FQ13275 785 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 AIDAQ96BJ3 306 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 NOP53Q9NZM5 478 aaKnown RBP8.75□□□□□ -1.01
VPS8-217ENST00000465213 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 PCDHGA11Q9Y5H2 935 aa8.75□□□□□ -1.01
VPS8-217ENST00000465213 TATP17735 454 aaPredicted RBP8.74□□□□□ -1.01
VPS8-217ENST00000465213 CHSY3Q70JA7 882 aa8.74□□□□□ -1.01
VPS8-217ENST00000465213 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
VPS8-217ENST00000465213 DCDC2BA2VCK2 349 aa8.73□□□□□ -1.01
VPS8-217ENST00000465213 ARSJQ5FYB0 599 aaPredicted RBP8.73□□□□□ -1.01
VPS8-217ENST00000465213 FCHSD1Q86WN1 690 aa8.73□□□□□ -1.01
VPS8-217ENST00000465213 ZIC5Q96T25 663 aa8.73□□□□□ -1.01
VPS8-217ENST00000465213 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
VPS8-217ENST00000465213 C1QTNF9BB2RNN3 333 aa8.72□□□□□ -1.01
VPS8-217ENST00000465213 CD33P20138 364 aa8.72□□□□□ -1.01
VPS8-217ENST00000465213 LAMC2Q13753 1193 aa8.72□□□□□ -1.01
VPS8-217ENST00000465213 ZNF468Q5VIY5 522 aaPredicted RBP8.72□□□□□ -1.01
VPS8-217ENST00000465213 CD163Q86VB7 1156 aa8.72□□□□□ -1.01
VPS8-217ENST00000465213 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
VPS8-217ENST00000465213 EFSO43281 561 aa8.71□□□□□ -1.02
VPS8-217ENST00000465213 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
VPS8-217ENST00000465213 PIK3CDO00329 1044 aa8.7□□□□□ -1.02
VPS8-217ENST00000465213 BACH1O14867 736 aa8.7□□□□□ -1.02
VPS8-217ENST00000465213 FLIIQ13045 1269 aa8.7□□□□□ -1.02
VPS8-217ENST00000465213 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
VPS8-217ENST00000465213 CABP1Q9NZU7 370 aa8.7□□□□□ -1.02
VPS8-217ENST00000465213 SCHIP1Q9P0W5 487 aaPredicted RBP8.7□□□□□ -1.02
VPS8-217ENST00000465213 FURINP09958 794 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 CHRNA4P43681 627 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 EML3Q32P44 896 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 MDFIQ99750 246 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
VPS8-217ENST00000465213 POM121Q96HA1 1249 aa8.68□□□□□ -1.02
VPS8-217ENST00000465213 ALG2Q9H553 416 aa8.68□□□□□ -1.02
VPS8-217ENST00000465213 NOD1Q9Y239 953 aa8.68□□□□□ -1.02
VPS8-217ENST00000465213 GJA3Q9Y6H8 435 aa8.68□□□□□ -1.02
VPS8-217ENST00000465213 EPHA4P54764 986 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 GTF2IP78347 998 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 TEAD4Q15561 434 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 TRIM11Q96F44 468 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
VPS8-217ENST00000465213 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
VPS8-217ENST00000465213 TXLNAP40222 546 aa8.66□□□□□ -1.02
VPS8-217ENST00000465213 PCBP4P57723 403 aaKnown RBP8.66□□□□□ -1.02
VPS8-217ENST00000465213 ZNF358Q9NW07 568 aa8.66□□□□□ -1.02
VPS8-217ENST00000465213 PRR12Q9ULL5 1215 aa8.66□□□□□ -1.02
VPS8-217ENST00000465213 ELOA3CA0A087WX78 387 aaPredicted RBP8.65□□□□□ -1.02
VPS8-217ENST00000465213 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
VPS8-217ENST00000465213 EML1O00423 815 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 SKIP12755 728 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 BICDL1Q6ZP65 573 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 C7orf43Q8WVR3 580 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
VPS8-217ENST00000465213 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS8-217ENST00000465213 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
VPS8-217ENST00000465213 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
VPS8-217ENST00000465213 NOS2P35228 1153 aa8.63□□□□□ -1.03
VPS8-217ENST00000465213 NCOA4Q13772 614 aa8.63□□□□□ -1.03
VPS8-217ENST00000465213 Q8N3U1 123 aa8.63□□□□□ -1.03
VPS8-217ENST00000465213 ADARB2-AS1A8MUL3 147 aa8.62□□□□□ -1.03
VPS8-217ENST00000465213 SIN3BO75182 1162 aa8.62□□□□□ -1.03
VPS8-217ENST00000465213 SYT9Q86SS6 491 aa8.62□□□□□ -1.03
VPS8-217ENST00000465213 PLVAPQ9BX97 442 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms