RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 SIK1P57059 783 aa17.17■□□□□ 0.34
ATF3-208ENST00000465155 MRPL50Q8N5N7 158 aaKnown RBP17.17■□□□□ 0.34
ATF3-208ENST00000465155 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
ATF3-208ENST00000465155 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
ATF3-208ENST00000465155 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
ATF3-208ENST00000465155 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
ATF3-208ENST00000465155 CICQ96RK0 1608 aaPredicted RBP17.16■□□□□ 0.34
ATF3-208ENST00000465155 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
ATF3-208ENST00000465155 PLIN1O60240 522 aa17.15■□□□□ 0.34
ATF3-208ENST00000465155 ATP6V1AP38606 617 aa17.15■□□□□ 0.34
ATF3-208ENST00000465155 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
ATF3-208ENST00000465155 TEX13AQ9BXU3 409 aaPredicted RBP17.15■□□□□ 0.34
ATF3-208ENST00000465155 CHPF2Q9P2E5 772 aa17.15■□□□□ 0.34
ATF3-208ENST00000465155 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
ATF3-208ENST00000465155 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
ATF3-208ENST00000465155 BRPF1P55201 1214 aaPredicted RBP17.14■□□□□ 0.33
ATF3-208ENST00000465155 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.14■□□□□ 0.33
ATF3-208ENST00000465155 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
ATF3-208ENST00000465155 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
ATF3-208ENST00000465155 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
ATF3-208ENST00000465155 STARD3NLO95772 234 aa17.13■□□□□ 0.33
ATF3-208ENST00000465155 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
ATF3-208ENST00000465155 ANXA1P04083 346 aa17.12■□□□□ 0.33
ATF3-208ENST00000465155 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATF3-208ENST00000465155 A1BGP04217 495 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 CYP19A1P11511 503 aaPredicted RBP17.11■□□□□ 0.33
ATF3-208ENST00000465155 MYL6BP14649 208 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 PIP4K2AP48426 406 aaPredicted RBP17.11■□□□□ 0.33
ATF3-208ENST00000465155 KCNQ4P56696 695 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 ITPK1Q13572 414 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 PDIA6Q15084 440 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 PROSER3Q2NL68 480 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 TAF1LQ8IZX4 1826 aa17.11■□□□□ 0.33
ATF3-208ENST00000465155 APBA3O96018 575 aa17.1■□□□□ 0.33
ATF3-208ENST00000465155 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
ATF3-208ENST00000465155 G2E3Q7L622 706 aa17.1■□□□□ 0.33
ATF3-208ENST00000465155 PHAXQ9H814 394 aaKnown RBP17.1■□□□□ 0.33
ATF3-208ENST00000465155 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
ATF3-208ENST00000465155 ERBB4Q15303 1308 aa17.1■□□□□ 0.33
ATF3-208ENST00000465155 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
ATF3-208ENST00000465155 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
ATF3-208ENST00000465155 FLIIQ13045 1269 aa17.09■□□□□ 0.33
ATF3-208ENST00000465155 NBPF26B4DH59 902 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
ATF3-208ENST00000465155 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 NBPF10Q6P3W6 841 aaKnown RBP17.08■□□□□ 0.32
ATF3-208ENST00000465155 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 PTPRCP08575 1304 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 RREB1Q92766 1687 aa17.08■□□□□ 0.32
ATF3-208ENST00000465155 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
ATF3-208ENST00000465155 PLSCR1O15162 318 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 TRIM27P14373 513 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 CRKLP46109 303 aaKnown RBP17.07■□□□□ 0.32
ATF3-208ENST00000465155 LINC00116Q8NCU8 138 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 CLUAP1Q96AJ1 413 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
ATF3-208ENST00000465155 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 NEFLP07196 543 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
ATF3-208ENST00000465155 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 LRP10Q7Z4F1 713 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 ZBTB1Q9Y2K1 713 aa17.07■□□□□ 0.32
ATF3-208ENST00000465155 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
ATF3-208ENST00000465155 SLC27A3Q5K4L6 730 aa17.06■□□□□ 0.32
ATF3-208ENST00000465155 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
ATF3-208ENST00000465155 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
ATF3-208ENST00000465155 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
ATF3-208ENST00000465155 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
ATF3-208ENST00000465155 INTS5Q6P9B9 1019 aaKnown RBP17.05■□□□□ 0.32
ATF3-208ENST00000465155 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
ATF3-208ENST00000465155 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
ATF3-208ENST00000465155 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
ATF3-208ENST00000465155 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 MS4A1P11836 297 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
ATF3-208ENST00000465155 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 XAGE3Q8WTP9 111 aa17.04■□□□□ 0.32
ATF3-208ENST00000465155 RLBP1P12271 317 aa17.03■□□□□ 0.32
ATF3-208ENST00000465155 PROM2Q8N271 834 aa17.03■□□□□ 0.32
ATF3-208ENST00000465155 CNTNAP4Q9C0A0 1308 aa17.03■□□□□ 0.32
ATF3-208ENST00000465155 F6X3S4 739 aa17.03■□□□□ 0.32
ATF3-208ENST00000465155 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.31
ATF3-208ENST00000465155 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.31
ATF3-208ENST00000465155 ABCC4O15439 1325 aa17.02■□□□□ 0.31
ATF3-208ENST00000465155 ARFGEF2Q9Y6D5 1785 aa17.02■□□□□ 0.31
ATF3-208ENST00000465155 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
ATF3-208ENST00000465155 FKBP8Q14318 412 aa17.01■□□□□ 0.31
ATF3-208ENST00000465155 RC3H1Q5TC82 1133 aaKnown RBP17.01■□□□□ 0.31
ATF3-208ENST00000465155 NPM2Q86SE8 214 aaKnown RBP17.01■□□□□ 0.31
ATF3-208ENST00000465155 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
ATF3-208ENST00000465155 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
ATF3-208ENST00000465155 ADCY9O60503 1353 aa17■□□□□ 0.31
ATF3-208ENST00000465155 EN1Q05925 392 aaPredicted RBP17■□□□□ 0.31
ATF3-208ENST00000465155 SLC4A10Q6U841 1118 aa17■□□□□ 0.31
ATF3-208ENST00000465155 KSR2Q6VAB6 950 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms