RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 SKIV2LQ15477 1246 aaKnown RBP8.2□□□□□ -1.1
CMTM1-207ENST00000465057 PKDCCQ504Y2 493 aa8.2□□□□□ -1.1
CMTM1-207ENST00000465057 ZNF326Q5BKZ1 582 aaKnown RBP8.2□□□□□ -1.1
CMTM1-207ENST00000465057 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
CMTM1-207ENST00000465057 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
CMTM1-207ENST00000465057 NUTM2AQ8IVF1 878 aaPredicted RBP8.2□□□□□ -1.1
CMTM1-207ENST00000465057 JCADQ9P266 1359 aa8.2□□□□□ -1.1
CMTM1-207ENST00000465057 NCOA3Q9Y6Q9 1424 aa8.2□□□□□ -1.1
CMTM1-207ENST00000465057 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
CMTM1-207ENST00000465057 CYP4X1Q8N118 509 aa8.19□□□□□ -1.1
CMTM1-207ENST00000465057 UNC93B1Q9H1C4 597 aa8.19□□□□□ -1.1
CMTM1-207ENST00000465057 AMOTL2Q9Y2J4 779 aa8.19□□□□□ -1.1
CMTM1-207ENST00000465057 ASXL1Q8IXJ9 1541 aa8.19□□□□□ -1.1
CMTM1-207ENST00000465057 IFT172Q9UG01 1749 aa8.18□□□□□ -1.1
CMTM1-207ENST00000465057 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
CMTM1-207ENST00000465057 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
CMTM1-207ENST00000465057 METP08581 1390 aa8.18□□□□□ -1.1
CMTM1-207ENST00000465057 ATF3P18847 181 aa8.17□□□□□ -1.1
CMTM1-207ENST00000465057 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
CMTM1-207ENST00000465057 SNIP1Q8TAD8 396 aaKnown RBP8.17□□□□□ -1.1
CMTM1-207ENST00000465057 HFM1A2PYH4 1435 aa8.17□□□□□ -1.1
CMTM1-207ENST00000465057 DCCP43146 1447 aa8.17□□□□□ -1.1
CMTM1-207ENST00000465057 MST1RQ04912 1400 aa8.17□□□□□ -1.1
CMTM1-207ENST00000465057 F12P00748 615 aaPredicted RBP8.16□□□□□ -1.1
CMTM1-207ENST00000465057 SH3BP2P78314 561 aa8.16□□□□□ -1.1
CMTM1-207ENST00000465057 BRINP3Q76B58 766 aa8.16□□□□□ -1.1
CMTM1-207ENST00000465057 C19orf44Q9H6X5 657 aa8.16□□□□□ -1.1
CMTM1-207ENST00000465057 ADGRL3Q9HAR2 1447 aa8.16□□□□□ -1.1
CMTM1-207ENST00000465057 GTF3C3Q9Y5Q9 886 aa8.16□□□□□ -1.1
CMTM1-207ENST00000465057 TTC24A2A3L6 582 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-207ENST00000465057 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-207ENST00000465057 CTHP32929 405 aa8.15□□□□□ -1.1
CMTM1-207ENST00000465057 NEUROD2Q15784 382 aa8.15□□□□□ -1.1
CMTM1-207ENST00000465057 PROCA1Q8NCQ7 364 aaPredicted RBP8.15□□□□□ -1.1
CMTM1-207ENST00000465057 BAP1Q92560 729 aa8.15□□□□□ -1.1
CMTM1-207ENST00000465057 TSC1Q92574 1164 aa8.15□□□□□ -1.1
CMTM1-207ENST00000465057 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
CMTM1-207ENST00000465057 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
CMTM1-207ENST00000465057 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CMTM1-207ENST00000465057 LAMC1P11047 1609 aa8.14□□□□□ -1.11
CMTM1-207ENST00000465057 PTCH1Q13635 1447 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 SPATA31A6Q5VVP1 1343 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 CLSPNQ9HAW4 1339 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 KNDC1Q76NI1 1749 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 AVPP01185 164 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
CMTM1-207ENST00000465057 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
CMTM1-207ENST00000465057 PPP2R2DQ66LE6 453 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 DDX17Q92841 729 aaKnown RBP8.13□□□□□ -1.11
CMTM1-207ENST00000465057 MAP10Q9P2G4 905 aa8.13□□□□□ -1.11
CMTM1-207ENST00000465057 ROBO2Q9HCK4 1378 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 SIAH2O43255 324 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 SMPD1P17405 629 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 ZNF511Q8NB15 262 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 EHBP1Q8NDI1 1231 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 RGPD8O14715 1765 aaPredicted RBP8.12□□□□□ -1.11
CMTM1-207ENST00000465057 SETD5Q9C0A6 1442 aa8.12□□□□□ -1.11
CMTM1-207ENST00000465057 J3QL48 77 aa8.11□□□□□ -1.11
CMTM1-207ENST00000465057 GOPCQ9HD26 462 aa8.11□□□□□ -1.11
CMTM1-207ENST00000465057 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
CMTM1-207ENST00000465057 C1orf167Q5SNV9 1468 aa8.11□□□□□ -1.11
CMTM1-207ENST00000465057 PNPLA6Q8IY17 1366 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 FMN2Q9NZ56 1722 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 CRIPAKQ8N1N5 446 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 PRAG1Q86YV5 1406 aa8.1□□□□□ -1.11
CMTM1-207ENST00000465057 DIEXFQ68CQ4 756 aaKnown RBP8.09□□□□□ -1.11
CMTM1-207ENST00000465057 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
CMTM1-207ENST00000465057 COL22A1Q8NFW1 1626 aaPredicted RBP8.09□□□□□ -1.11
CMTM1-207ENST00000465057 CCDC144AA2RUR9 1427 aa8.09□□□□□ -1.11
CMTM1-207ENST00000465057 AFF2P51816 1311 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
CMTM1-207ENST00000465057 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-207ENST00000465057 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 ZNF772Q68DY9 489 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-207ENST00000465057 ARMC2Q8NEN0 867 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 ORAI2Q96SN7 254 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 EP400Q96L91 3159 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
CMTM1-207ENST00000465057 RPGRIP1LQ68CZ1 1315 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 ADGRF5Q8IZF2 1346 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 ALDH1A1P00352 501 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 RGL3Q3MIN7 710 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 ZNF787Q6DD87 383 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 LRRC59Q96AG4 307 aaKnown RBP8.07□□□□□ -1.12
CMTM1-207ENST00000465057 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
CMTM1-207ENST00000465057 RGS12O14924 1447 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 PIK3C2GO75747 1445 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 AXIN1O15169 862 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 MPNDQ8N594 471 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 CCER1Q8TC90 406 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-207ENST00000465057 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 PCMTD1Q96MG8 357 aaPredicted RBP8.06□□□□□ -1.12
CMTM1-207ENST00000465057 MPHOSPH9Q99550 1183 aa8.06□□□□□ -1.12
CMTM1-207ENST00000465057 PLEKHH1Q9ULM0 1364 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms