RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SPOCK3Q9BQ16 436 aa10.14□□□□□ -0.79
UBR4-209ENST00000465036 ZCCHC2Q9C0B9 1178 aaKnown RBP10.14□□□□□ -0.79
UBR4-209ENST00000465036 PCDHGA11Q9Y5H2 935 aa10.14□□□□□ -0.79
UBR4-209ENST00000465036 A6NJY4 79 aa10.13□□□□□ -0.79
UBR4-209ENST00000465036 HOXB4P17483 251 aaPredicted RBP10.13□□□□□ -0.79
UBR4-209ENST00000465036 PIK3R2O00459 728 aa10.12□□□□□ -0.79
UBR4-209ENST00000465036 PROCP04070 461 aa10.12□□□□□ -0.79
UBR4-209ENST00000465036 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
UBR4-209ENST00000465036 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
UBR4-209ENST00000465036 GGA1Q9UJY5 639 aa10.12□□□□□ -0.79
UBR4-209ENST00000465036 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
UBR4-209ENST00000465036 ATXN7O15265 892 aaPredicted RBP10.11□□□□□ -0.79
UBR4-209ENST00000465036 EPXP11678 715 aa10.11□□□□□ -0.79
UBR4-209ENST00000465036 LINC00114Q6XXX2 140 aa10.11□□□□□ -0.79
UBR4-209ENST00000465036 ALG2Q9H553 416 aa10.11□□□□□ -0.79
UBR4-209ENST00000465036 AIDAQ96BJ3 306 aa10.1□□□□□ -0.79
UBR4-209ENST00000465036 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 BACH1O14867 736 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
UBR4-209ENST00000465036 TNP2Q05952 138 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 EML3Q32P44 896 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
UBR4-209ENST00000465036 PIK3CDO00329 1044 aa10.08□□□□□ -0.8
UBR4-209ENST00000465036 RRAGCQ9HB90 399 aa10.08□□□□□ -0.8
UBR4-209ENST00000465036 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
UBR4-209ENST00000465036 KRBA1A5PL33 1030 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 ADAM23O75077 832 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 FAM157BP0CG42 384 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 MAPTP10636 758 aaKnown RBP10.07□□□□□ -0.8
UBR4-209ENST00000465036 COL8A1P27658 744 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 ARSJQ5FYB0 599 aaPredicted RBP10.07□□□□□ -0.8
UBR4-209ENST00000465036 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 ZIC5Q96T25 663 aa10.07□□□□□ -0.8
UBR4-209ENST00000465036 GNB5O14775 395 aa10.06□□□□□ -0.8
UBR4-209ENST00000465036 ADH6P28332 368 aa10.06□□□□□ -0.8
UBR4-209ENST00000465036 LAMC2Q13753 1193 aa10.06□□□□□ -0.8
UBR4-209ENST00000465036 SCHIP1Q9P0W5 487 aaPredicted RBP10.06□□□□□ -0.8
UBR4-209ENST00000465036 SKIP12755 728 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 AMPD1P23109 780 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 DGKGP49619 791 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 CABP1Q9NZU7 370 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 HCN2Q9UL51 889 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
UBR4-209ENST00000465036 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
UBR4-209ENST00000465036 GTF2IP78347 998 aa10.04□□□□□ -0.8
UBR4-209ENST00000465036 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
UBR4-209ENST00000465036 EFSO43281 561 aa10.03□□□□□ -0.8
UBR4-209ENST00000465036 TEAD4Q15561 434 aa10.03□□□□□ -0.8
UBR4-209ENST00000465036 KHNYNO15037 678 aaKnown RBP10.02□□□□□ -0.81
UBR4-209ENST00000465036 EPHA4P54764 986 aa10.02□□□□□ -0.81
UBR4-209ENST00000465036 ZNF358Q9NW07 568 aa10.02□□□□□ -0.81
UBR4-209ENST00000465036 NOP53Q9NZM5 478 aaKnown RBP10.02□□□□□ -0.81
UBR4-209ENST00000465036 KLF15Q9UIH9 416 aa10.02□□□□□ -0.81
UBR4-209ENST00000465036 DCDC2BA2VCK2 349 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 CD33P20138 364 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 NCOA4Q13772 614 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 ZNF468Q5VIY5 522 aaPredicted RBP10.01□□□□□ -0.81
UBR4-209ENST00000465036 CHSY3Q70JA7 882 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 SUV39H2Q9H5I1 410 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 GJA3Q9Y6H8 435 aa10.01□□□□□ -0.81
UBR4-209ENST00000465036 FCHSD1Q86WN1 690 aa10□□□□□ -0.81
UBR4-209ENST00000465036 TRIM50Q86XT4 487 aa10□□□□□ -0.81
UBR4-209ENST00000465036 SERBP1Q8NC51 408 aaKnown RBP eCLIP10□□□□□ -0.81
UBR4-209ENST00000465036 ZDHHC1Q8WTX9 485 aa10□□□□□ -0.81
UBR4-209ENST00000465036 MARK1Q9P0L2 795 aa10□□□□□ -0.81
UBR4-209ENST00000465036 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 EML1O00423 815 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 BAG6P46379 1132 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 GRIN2CQ14957 1233 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 PLEKHM2Q8IWE5 1019 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 C7orf43Q8WVR3 580 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 L3MBTL2Q969R5 705 aa9.99□□□□□ -0.81
UBR4-209ENST00000465036 RAD21O60216 631 aa9.98□□□□□ -0.81
UBR4-209ENST00000465036 NOS2P35228 1153 aa9.98□□□□□ -0.81
UBR4-209ENST00000465036 TXLNAP40222 546 aa9.98□□□□□ -0.81
UBR4-209ENST00000465036 FLIIQ13045 1269 aa9.98□□□□□ -0.81
UBR4-209ENST00000465036 BICDL1Q6ZP65 573 aa9.98□□□□□ -0.81
UBR4-209ENST00000465036 PSME1Q06323 249 aa9.97□□□□□ -0.81
UBR4-209ENST00000465036 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
UBR4-209ENST00000465036 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
UBR4-209ENST00000465036 ATP1A2P50993 1020 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 POTEAQ6S8J7 498 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 POM121Q96HA1 1249 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 MDFIQ99750 246 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
UBR4-209ENST00000465036 M0R2N6 131 aa9.95□□□□□ -0.82
UBR4-209ENST00000465036 ZBTB7BO15156 539 aaPredicted RBP9.95□□□□□ -0.82
UBR4-209ENST00000465036 HIRAP54198 1017 aaPredicted RBP9.95□□□□□ -0.82
UBR4-209ENST00000465036 C1orf53Q5VUE5 145 aa9.94□□□□□ -0.82
UBR4-209ENST00000465036 TNS4Q8IZW8 715 aa9.94□□□□□ -0.82
UBR4-209ENST00000465036 ELOA3CA0A087WX78 387 aaPredicted RBP9.93□□□□□ -0.82
UBR4-209ENST00000465036 SERTM1A2A2V5 107 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
UBR4-209ENST00000465036 C1QTNF9BB2RNN3 333 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 SIN3BO75182 1162 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms