RNA–Protein interactions for RNA: ENST00000464916.1

COL1A2-203, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 1,123 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-203ENST00000464916 MSL1Q68DK7 614 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 MCM10Q7L590 875 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 LINC00116Q8NCU8 138 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
COL1A2-203ENST00000464916 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
COL1A2-203ENST00000464916 PNPLA7Q6ZV29 1317 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 COL23A1Q86Y22 540 aaPredicted RBP11.7□□□□□ -0.54
COL1A2-203ENST00000464916 IL17REQ8NFR9 667 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 ARXQ96QS3 562 aa11.7□□□□□ -0.54
COL1A2-203ENST00000464916 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
COL1A2-203ENST00000464916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
COL1A2-203ENST00000464916 RIPK4P57078 832 aa11.69□□□□□ -0.54
COL1A2-203ENST00000464916 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
COL1A2-203ENST00000464916 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
COL1A2-203ENST00000464916 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
COL1A2-203ENST00000464916 ZNF428Q96B54 188 aa11.69□□□□□ -0.54
COL1A2-203ENST00000464916 ZNF330Q9Y3S2 320 aaPredicted RBP11.69□□□□□ -0.54
COL1A2-203ENST00000464916 TOGARAM1Q9Y4F4 1720 aa11.69□□□□□ -0.54
COL1A2-203ENST00000464916 ITGB4P16144 1822 aa11.68□□□□□ -0.54
COL1A2-203ENST00000464916 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
COL1A2-203ENST00000464916 RFC4P35249 363 aa11.68□□□□□ -0.54
COL1A2-203ENST00000464916 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
COL1A2-203ENST00000464916 DNAJC10Q8IXB1 793 aa11.67□□□□□ -0.54
COL1A2-203ENST00000464916 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
COL1A2-203ENST00000464916 STARD3NLO95772 234 aa11.66□□□□□ -0.54
COL1A2-203ENST00000464916 SSFA2P28290 1259 aa11.66□□□□□ -0.54
COL1A2-203ENST00000464916 CRKLP46109 303 aaKnown RBP11.66□□□□□ -0.54
COL1A2-203ENST00000464916 VASPP50552 380 aaPredicted RBP11.66□□□□□ -0.54
COL1A2-203ENST00000464916 ZNF790Q6PG37 636 aa11.66□□□□□ -0.54
COL1A2-203ENST00000464916 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
COL1A2-203ENST00000464916 MIS18AQ9NYP9 233 aa11.66□□□□□ -0.54
COL1A2-203ENST00000464916 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
COL1A2-203ENST00000464916 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
COL1A2-203ENST00000464916 RRP1P56182 461 aaKnown RBP11.65□□□□□ -0.54
COL1A2-203ENST00000464916 GNAI1P63096 354 aa11.65□□□□□ -0.54
COL1A2-203ENST00000464916 TAF7Q15545 349 aaPredicted RBP11.65□□□□□ -0.54
COL1A2-203ENST00000464916 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
COL1A2-203ENST00000464916 PPP4R2Q9NY27 417 aa11.65□□□□□ -0.54
COL1A2-203ENST00000464916 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
COL1A2-203ENST00000464916 LY75O60449 1722 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 ZPR1O75312 459 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 RPS6KA4O75676 772 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 MS4A1P11836 297 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 PTGER2P43116 358 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 AAMPQ13685 434 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
COL1A2-203ENST00000464916 ZNF496Q96IT1 587 aaPredicted RBP11.64□□□□□ -0.55
COL1A2-203ENST00000464916 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
COL1A2-203ENST00000464916 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
COL1A2-203ENST00000464916 CCDC87Q9NVE4 849 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
COL1A2-203ENST00000464916 KCNQ3O43525 872 aa11.63□□□□□ -0.55
COL1A2-203ENST00000464916 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
COL1A2-203ENST00000464916 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
COL1A2-203ENST00000464916 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
COL1A2-203ENST00000464916 CNTNAP4Q9C0A0 1308 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 C5P01031 1676 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 PAPPAQ13219 1627 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 C4BP0C0L5 1744 aa11.62□□□□□ -0.55
COL1A2-203ENST00000464916 LRP5O75197 1615 aa11.61□□□□□ -0.55
COL1A2-203ENST00000464916 SRCAPQ6ZRS2 3230 aa11.61□□□□□ -0.55
COL1A2-203ENST00000464916 CYP19A1P11511 503 aaPredicted RBP11.61□□□□□ -0.55
COL1A2-203ENST00000464916 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
COL1A2-203ENST00000464916 TSPYL4Q9UJ04 414 aa11.61□□□□□ -0.55
COL1A2-203ENST00000464916 SCN11AQ9UI33 1791 aa11.61□□□□□ -0.55
COL1A2-203ENST00000464916 CEMIPQ8WUJ3 1361 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 MMP10P09238 476 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 SNRPA1P09661 255 aaKnown RBP11.6□□□□□ -0.55
COL1A2-203ENST00000464916 PDE3AQ14432 1141 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 GPR162Q16538 588 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
COL1A2-203ENST00000464916 SYT17Q9BSW7 474 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 SRP68Q9UHB9 627 aaKnown RBP11.6□□□□□ -0.55
COL1A2-203ENST00000464916 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 PARP3Q9Y6F1 533 aa11.6□□□□□ -0.55
COL1A2-203ENST00000464916 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
COL1A2-203ENST00000464916 CASZ1Q86V15 1759 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 A0A087WZG4 1122 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 NPHP1O15259 732 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 A1BGP04217 495 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 ZNF853P0CG23 659 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
COL1A2-203ENST00000464916 ALDH1L2Q3SY69 923 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 ZBTB1Q9Y2K1 713 aa11.59□□□□□ -0.55
COL1A2-203ENST00000464916 MRC1P22897 1456 aa11.58□□□□□ -0.56
COL1A2-203ENST00000464916 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
COL1A2-203ENST00000464916 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
COL1A2-203ENST00000464916 BICDL1Q6ZP65 573 aa11.58□□□□□ -0.56
COL1A2-203ENST00000464916 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms