RNA–Protein interactions for RNA: ENST00000464534.3

RN7SL55P-201, Transcript of RNA, 7SL, cytoplasmic 55, pseudogene, humanhuman

BASIC

Gene RN7SL55P, Length 297 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL55P-201ENST00000464534 SSFA2P28290 1259 aa9.84□□□□□ -0.83
RN7SL55P-201ENST00000464534 CRKLP46109 303 aaKnown RBP9.84□□□□□ -0.83
RN7SL55P-201ENST00000464534 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
RN7SL55P-201ENST00000464534 TSR2Q969E8 191 aaKnown RBP9.84□□□□□ -0.83
RN7SL55P-201ENST00000464534 USP16Q9Y5T5 823 aa9.84□□□□□ -0.83
RN7SL55P-201ENST00000464534 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 GNPATO15228 680 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 KIF6Q6ZMV9 814 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 DDX21Q9NR30 783 aaKnown RBP eCLIP9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 ZNF652Q9Y2D9 606 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 BTAF1O14981 1849 aa9.83□□□□□ -0.84
RN7SL55P-201ENST00000464534 IPO8O15397 1037 aaKnown RBP9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 VAMP4O75379 141 aa9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 ITPK1Q13572 414 aa9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 TRMT2AQ8IZ69 625 aaKnown RBP9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 C8orf58Q8NAV2 365 aa9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
RN7SL55P-201ENST00000464534 RGL2O15211 777 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 A1BGP04217 495 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 SLC4A2P04920 1241 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 MS4A1P11836 297 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 HSP90AB3PQ58FF7 597 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 LINC00116Q8NCU8 138 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 AKT1S1Q96B36 256 aa9.81□□□□□ -0.84
RN7SL55P-201ENST00000464534 RGPD3A6NKT7 1758 aaPredicted RBP9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 RGPD4Q7Z3J3 1758 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 TOGARAM1Q9Y4F4 1720 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 MYL6BP14649 208 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 KCNQ4P56696 695 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 INTS5Q6P9B9 1019 aaKnown RBP9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 ZNF831Q5JPB2 1677 aa9.8□□□□□ -0.84
RN7SL55P-201ENST00000464534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 ERVV-1B6SEH8 477 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 PHF14O94880 888 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 HSP90B1P14625 803 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 POLD1P28340 1107 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 NEXNQ0ZGT2 675 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 ANKRD13DQ6ZTN6 518 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 RIC3Q7Z5B4 369 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 DZIP3Q86Y13 1208 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 NARFQ9UHQ1 456 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 ZBTB1Q9Y2K1 713 aa9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 VIRMAQ69YN4 1812 aaKnown RBP9.79□□□□□ -0.84
RN7SL55P-201ENST00000464534 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 NPHP1O15259 732 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 AIMP1Q12904 312 aaKnown RBP9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 R3HDM1Q15032 1099 aaKnown RBP9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 COPS6Q7L5N1 327 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 TSPYL6Q8N831 410 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 CHPF2Q9P2E5 772 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 HDAC5Q9UQL6 1122 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 LY75O60449 1722 aa9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 TNS1Q9HBL0 1735 aaKnown RBP9.78□□□□□ -0.84
RN7SL55P-201ENST00000464534 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.84
RN7SL55P-201ENST00000464534 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 PLBD2Q8NHP8 589 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 SETDB2Q96T68 719 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 MTFR1LQ9H019 292 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 SMC4Q9NTJ3 1288 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 PTPRCP08575 1304 aa9.77□□□□□ -0.85
RN7SL55P-201ENST00000464534 KDM3BQ7LBC6 1761 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 GTF2E1P29083 439 aaPredicted RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 FKBP5Q13451 457 aaPredicted RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 KRT24Q2M2I5 525 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 COL23A1Q86Y22 540 aaPredicted RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 ARHGAP45Q92619 1136 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 SPON1Q9HCB6 807 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 TBC1D2BQ9UPU7 963 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
RN7SL55P-201ENST00000464534 COL15A1P39059 1388 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 ZNF827Q17R98 1081 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 XAGE3Q8WTP9 111 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 NYXQ9GZU5 481 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 MAP3K15Q6ZN16 1313 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 KIF16BQ96L93 1317 aa9.75□□□□□ -0.85
RN7SL55P-201ENST00000464534 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 UBR2Q8IWV8 1755 aa9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 FLIIQ13045 1269 aa9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 PDIA6Q15084 440 aa9.74□□□□□ -0.85
RN7SL55P-201ENST00000464534 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms