RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 KRTAP3-3Q9BYR6 98 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 KRTAP3-2Q9BYR7 98 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 SPAG9O60271 1321 aaKnown RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 FAM205CA6NFA0 338 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 KCNJ4P48050 445 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 MRE11P49959 708 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 RBM46Q8TBY0 533 aaKnown RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 ZC3H15Q8WU90 426 aaKnown RBP4.56□□□□□ -1.68
COL8A1-205ENST00000463753 GRPEL1Q9HAV7 217 aa4.56□□□□□ -1.68
COL8A1-205ENST00000463753 TRPM3Q9HCF6 1732 aaPredicted RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 BHMG1C9JSJ3 638 aaPredicted RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 COL9A1P20849 921 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 HIC1Q14526 733 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 BARGINQ6ZT62 677 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 ZNF771Q7L3S4 317 aaPredicted RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 MTERF4Q7Z6M4 381 aaKnown RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 GTPBP4Q9BZE4 634 aaKnown RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 SBNO1A3KN83 1393 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 OFD1O75665 1012 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 TSR1Q2NL82 804 aaKnown RBP4.55□□□□□ -1.68
COL8A1-205ENST00000463753 GPIHBP1Q8IV16 184 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 CAMKK2Q96RR4 588 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 CDHR5Q9HBB8 845 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 NUDCQ9Y266 331 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 PLEKHG2Q9H7P9 1386 aa4.55□□□□□ -1.68
COL8A1-205ENST00000463753 ZC3H4Q9UPT8 1303 aaKnown RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 FSD2A1L4K1 749 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 HRO43593 1189 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 PRSS12P56730 875 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 KIF1BO60333 1816 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 NUTM2BA6NNL0 878 aaPredicted RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 NUTM2EB1AL46 878 aaPredicted RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 HSP90B1P14625 803 aaKnown RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 NUTM2DQ5VT03 806 aaPredicted RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 NUTM2AQ8IVF1 878 aaPredicted RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 ADAMTS13Q76LX8 1427 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 SMG6Q86US8 1419 aaKnown RBP4.54□□□□□ -1.68
COL8A1-205ENST00000463753 ARFGEF1Q9Y6D6 1849 aa4.54□□□□□ -1.68
COL8A1-205ENST00000463753 XPCQ01831 940 aaPredicted RBP4.53□□□□□ -1.68
COL8A1-205ENST00000463753 TAF3Q5VWG9 929 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 EP400NLQ6ZTU2 488 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 TNS4Q8IZW8 715 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 KLRG1Q96E93 195 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 CCDC144AA2RUR9 1427 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 ATP10DQ9P241 1426 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 LMO7Q8WWI1 1683 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 C1orf167Q5SNV9 1468 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 GNPATO15228 680 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 MAP3K7O43318 606 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 DMRTA1Q5VZB9 504 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 TRIM34Q9BYJ4 488 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 VPS9D1Q9Y2B5 631 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 LSM11P83369 360 aaKnown RBP eCLIP4.53□□□□□ -1.68
COL8A1-205ENST00000463753 UNC5CLQ8IV45 518 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 TSC1Q92574 1164 aa4.53□□□□□ -1.68
COL8A1-205ENST00000463753 JARID2Q92833 1246 aaPredicted RBP4.53□□□□□ -1.68
COL8A1-205ENST00000463753 AKAP12Q02952 1782 aa4.53□□□□□ -1.69
COL8A1-205ENST00000463753 CLGNO14967 610 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 TRAK2O60296 914 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 MLECQ14165 292 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 BECN1Q14457 450 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 LAPTM4BQ86VI4 370 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 ZSCAN30Q86W11 494 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 SLC16A10Q8TF71 515 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 TRERF1Q96PN7 1200 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 DNAJC2Q99543 621 aaKnown RBP4.52□□□□□ -1.69
COL8A1-205ENST00000463753 USP21Q9UK80 565 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 MINK1Q8N4C8 1332 aaPredicted RBP4.52□□□□□ -1.69
COL8A1-205ENST00000463753 PPLO60437 1756 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 ZNF831Q5JPB2 1677 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 DYNC1I1O14576 645 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 MAP2K5Q13163 448 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 FAM198AQ9UFP1 575 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 RABGEF1Q9UJ41 708 aa4.52□□□□□ -1.69
COL8A1-205ENST00000463753 FAM177BA6PVY3 158 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 RRP1P56182 461 aaKnown RBP4.51□□□□□ -1.69
COL8A1-205ENST00000463753 FAM43BQ6ZT52 329 aaPredicted RBP4.51□□□□□ -1.69
COL8A1-205ENST00000463753 BRINP3Q76B58 766 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 CDAN1Q8IWY9 1227 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 KCNK17Q96T54 332 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 TECPR2O15040 1411 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 PLSCR1O15162 318 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 FAM161AQ3B820 660 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 CC2D1BQ5T0F9 858 aaKnown RBP4.51□□□□□ -1.69
COL8A1-205ENST00000463753 CDCA7LQ96GN5 454 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 EYA1Q99502 592 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 TSKSQ9UJT2 592 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 USP54Q70EL1 1684 aa4.51□□□□□ -1.69
COL8A1-205ENST00000463753 IFT172Q9UG01 1749 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 LOC102724159A0A0B4J2E5 919 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PSEN2P49810 448 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PWP2Q15269 919 aaKnown RBP4.5□□□□□ -1.69
COL8A1-205ENST00000463753 TMUB1Q9BVT8 246 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 ADGRG1Q9Y653 693 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 COL18A1P39060 1754 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PLIN1O60240 522 aa4.5□□□□□ -1.69
COL8A1-205ENST00000463753 PTMAP06454 111 aaKnown RBP4.5□□□□□ -1.69
COL8A1-205ENST00000463753 MCM4P33991 863 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms