RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 GPR182O15218 404 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 PRPF40AO75400 957 aaKnown RBP5.9□□□□□ -1.46
GPNMB-205ENST00000463011 PSMA6P60900 246 aaKnown RBP5.9□□□□□ -1.46
GPNMB-205ENST00000463011 FAM26DQ5JW98 314 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 ATCAYQ86WG3 371 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 FAM177A1Q8N128 213 aaPredicted RBP5.9□□□□□ -1.46
GPNMB-205ENST00000463011 STAG2Q8N3U4 1231 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 SETDB2Q96T68 719 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 NIF3L1Q9GZT8 377 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 QTRT2Q9H974 415 aaKnown RBP5.9□□□□□ -1.46
GPNMB-205ENST00000463011 USP3Q9Y6I4 520 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 TLL2Q9Y6L7 1015 aa5.9□□□□□ -1.46
GPNMB-205ENST00000463011 IGHA2P01877 340 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 FGD1P98174 961 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 PSMD2Q13200 908 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 PDE3BQ13370 1112 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 MTFR1Q15390 333 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 CCDC116Q8IYX3 515 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 ABTB2Q8N961 1025 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 XAGE2Q96GT9 111 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 FAM129BQ96TA1 746 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 ARHGEF10LQ9HCE6 1279 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 POLIQ9UNA4 740 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 CHMP3Q9Y3E7 222 aa5.89□□□□□ -1.47
GPNMB-205ENST00000463011 CDK2AP1O14519 115 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 SORBS3O60504 671 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 IL2RAP01589 272 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 BRD2P25440 801 aaKnown RBP5.88□□□□□ -1.47
GPNMB-205ENST00000463011 DAB2P98082 770 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 ATP2B2Q01814 1243 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 SH3PXD2AQ5TCZ1 1133 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 TMC4Q7Z404 712 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 ANKLE1Q8NAG6 615 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 PIK3R5Q8WYR1 880 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 MYO19Q96H55 970 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 VTI1BQ9UEU0 232 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 HCN4Q9Y3Q4 1203 aa5.88□□□□□ -1.47
GPNMB-205ENST00000463011 CD2BP2O95400 341 aaKnown RBP5.87□□□□□ -1.47
GPNMB-205ENST00000463011 GGCXP38435 758 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 KCNC4Q03721 635 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 DNM1Q05193 864 aaKnown RBP5.87□□□□□ -1.47
GPNMB-205ENST00000463011 RAD51AP2Q09MP3 1159 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 TLR1Q15399 786 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
GPNMB-205ENST00000463011 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 UBXN4Q92575 508 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 EDEM1Q92611 657 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 CNKSR1Q969H4 720 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 PUS7Q96PZ0 661 aaKnown RBP5.87□□□□□ -1.47
GPNMB-205ENST00000463011 ZNF232Q9UNY5 417 aa5.87□□□□□ -1.47
GPNMB-205ENST00000463011 PNMA6FA0A0J9YX94 578 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 SERTM1A2A2V5 107 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 SIAH2O43255 324 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 ADH1CP00326 375 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 NR3C2P08235 984 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 HMGB1P09429 215 aaKnown RBP5.86□□□□□ -1.47
GPNMB-205ENST00000463011 RPIAP49247 311 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 NR5A1Q13285 461 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 DGKZQ13574 1117 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 C11orf91Q3C1V1 193 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 METTL16Q86W50 562 aaKnown RBP5.86□□□□□ -1.47
GPNMB-205ENST00000463011 ETFBKMTQ8IXQ9 262 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 ALDH16A1Q8IZ83 802 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 MPNDQ8N594 471 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 RNF34Q969K3 372 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 PGPEP1Q9NXJ5 209 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 IQSEC3Q9UPP2 1182 aaPredicted RBP5.86□□□□□ -1.47
GPNMB-205ENST00000463011 PARP3Q9Y6F1 533 aa5.86□□□□□ -1.47
GPNMB-205ENST00000463011 EML1O00423 815 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
GPNMB-205ENST00000463011 MZF1P28698 734 aaPredicted RBP5.85□□□□□ -1.47
GPNMB-205ENST00000463011 NOS2P35228 1153 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 FANCCQ00597 558 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 ENOX2Q16206 610 aaKnown RBP5.85□□□□□ -1.47
GPNMB-205ENST00000463011 GJD3Q8N144 294 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 ZDHHC1Q8WTX9 485 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
GPNMB-205ENST00000463011 IFT43Q96FT9 208 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 ESYT1Q9BSJ8 1104 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 CABP1Q9NZU7 370 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 KLK14Q9P0G3 267 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 HCSTQ9UBK5 93 aa5.85□□□□□ -1.47
GPNMB-205ENST00000463011 PDGFAP04085 211 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 ITGAEP38570 1179 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 ZAP70P43403 619 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 USP5P45974 858 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 CENPCQ03188 943 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 TEAD4Q15561 434 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 ALG1LQ6GMV1 187 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 PPP1R18Q6NYC8 613 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 L3MBTL2Q969R5 705 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 HRH3Q9Y5N1 445 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 EMILIN1Q9Y6C2 1016 aa5.84□□□□□ -1.47
GPNMB-205ENST00000463011 SMARCA5O60264 1052 aaPredicted RBP5.83□□□□□ -1.48
GPNMB-205ENST00000463011 ADH1AP07327 375 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 ZNF76P36508 570 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 CBLBQ13191 982 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 RTN1Q16799 776 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 POTEAQ6S8J7 498 aa5.83□□□□□ -1.48
GPNMB-205ENST00000463011 LIAT1Q6ZQX7 453 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms