RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 IL13P35225 146 aa10.83□□□□□ -0.68
CDC42BPA-210ENST00000462553 DDR1Q08345 913 aa10.83□□□□□ -0.68
CDC42BPA-210ENST00000462553 BCS1LQ9Y276 419 aa10.83□□□□□ -0.68
CDC42BPA-210ENST00000462553 USP42Q9H9J4 1324 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-210ENST00000462553 COL11A2P13942 1736 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 RFC4P35249 363 aa10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 CRKLP46109 303 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 CABP4P57796 275 aa10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 SRP68Q9UHB9 627 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-210ENST00000462553 MTHFSP49914 203 aa10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 FKBP8Q14318 412 aa10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 SULT6B1Q6IMI4 303 aa10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 NFATC2IPQ8NCF5 419 aa10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 DICER1Q9UPY3 1922 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 COL3A1P02461 1466 aaPredicted RBP10.81□□□□□ -0.68
CDC42BPA-210ENST00000462553 AMER1Q5JTC6 1135 aaPredicted RBP10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 C1orf141Q5JVX7 400 aa10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 INTS5Q6P9B9 1019 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 PARP3Q9Y6F1 533 aa10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
CDC42BPA-210ENST00000462553 POLRMTO00411 1230 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 PER1O15534 1290 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 FCHSD2O94868 740 aa10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 NMRK2Q9NPI5 230 aa10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 ARFGEF2Q9Y6D5 1785 aa10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 SOS1Q07889 1333 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-210ENST00000462553 FER1L6Q2WGJ9 1857 aa10.78□□□□□ -0.68
CDC42BPA-210ENST00000462553 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
CDC42BPA-210ENST00000462553 ARHGAP27Q6ZUM4 889 aa10.78□□□□□ -0.68
CDC42BPA-210ENST00000462553 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
CDC42BPA-210ENST00000462553 SLC52A2Q9HAB3 445 aa10.78□□□□□ -0.68
CDC42BPA-210ENST00000462553 COL15A1P39059 1388 aa10.77□□□□□ -0.68
CDC42BPA-210ENST00000462553 TOMM70O94826 608 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 TM4SF1P30408 202 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 CHRNA5P30532 468 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 LGR6Q9HBX8 967 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.69
CDC42BPA-210ENST00000462553 CYP19A1P11511 503 aaPredicted RBP10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 SLC39A6Q13433 755 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 USPL1Q5W0Q7 1092 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 DNAJC5GQ8N7S2 189 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 PIM2Q9P1W9 311 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 KNSTRNQ9Y448 316 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 NPC1L1Q9UHC9 1359 aa10.76□□□□□ -0.69
CDC42BPA-210ENST00000462553 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 RNMTO43148 476 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 HMOX1P09601 288 aa10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 FXR2P51116 673 aaKnown RBP eCLIP10.75□□□□□ -0.696e-7■□□□□ 9
CDC42BPA-210ENST00000462553 APLP1P51693 650 aa10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 DALRD3Q5D0E6 543 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 ZBTB1Q9Y2K1 713 aa10.75□□□□□ -0.69
CDC42BPA-210ENST00000462553 PRELPP51888 382 aa10.74□□□□□ -0.69
CDC42BPA-210ENST00000462553 NFIXQ14938 502 aa10.74□□□□□ -0.69
CDC42BPA-210ENST00000462553 MTHFSDQ2M296 383 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-210ENST00000462553 RBM46Q8TBY0 533 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-210ENST00000462553 NARFQ9UHQ1 456 aa10.74□□□□□ -0.69
CDC42BPA-210ENST00000462553 RASSF7Q02833 373 aa10.73□□□□□ -0.69
CDC42BPA-210ENST00000462553 RNF181Q9P0P0 153 aa10.73□□□□□ -0.69
CDC42BPA-210ENST00000462553 SLX4Q8IY92 1834 aa10.72□□□□□ -0.69
CDC42BPA-210ENST00000462553 ZPR1O75312 459 aa10.72□□□□□ -0.69
CDC42BPA-210ENST00000462553 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
CDC42BPA-210ENST00000462553 ZBTB22O15209 634 aa10.71□□□□□ -0.69
CDC42BPA-210ENST00000462553 HTRA3P83110 453 aa10.71□□□□□ -0.69
CDC42BPA-210ENST00000462553 DLG5Q8TDM6 1919 aa10.71□□□□□ -0.69
CDC42BPA-210ENST00000462553 ZC3H4Q9UPT8 1303 aaKnown RBP10.71□□□□□ -0.69
CDC42BPA-210ENST00000462553 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
CDC42BPA-210ENST00000462553 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
CDC42BPA-210ENST00000462553 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-210ENST00000462553 EIF5P55010 431 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-210ENST00000462553 CC2D1BQ5T0F9 858 aaKnown RBP10.7□□□□□ -0.7
CDC42BPA-210ENST00000462553 CEMIPQ8WUJ3 1361 aa10.69□□□□□ -0.7
CDC42BPA-210ENST00000462553 HEG1Q9ULI3 1381 aa10.69□□□□□ -0.7
CDC42BPA-210ENST00000462553 NFKBIEO00221 500 aa10.69□□□□□ -0.7
CDC42BPA-210ENST00000462553 SERPINB2P05120 415 aa10.69□□□□□ -0.7
CDC42BPA-210ENST00000462553 FSTL1Q12841 308 aa10.69□□□□□ -0.7
CDC42BPA-210ENST00000462553 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 JMYQ8N9B5 988 aa10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 KLRG1Q96E93 195 aa10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 RRAGCQ9HB90 399 aa10.68□□□□□ -0.7
CDC42BPA-210ENST00000462553 KDM3BQ7LBC6 1761 aa10.67□□□□□ -0.7
CDC42BPA-210ENST00000462553 LMNB1P20700 586 aa10.67□□□□□ -0.7
CDC42BPA-210ENST00000462553 TBC1D9BQ66K14 1250 aa10.67□□□□□ -0.7
CDC42BPA-210ENST00000462553 C2CD5Q86YS7 1000 aa10.67□□□□□ -0.7
CDC42BPA-210ENST00000462553 C16orf71Q8IYS4 520 aaPredicted RBP10.67□□□□□ -0.7
CDC42BPA-210ENST00000462553 NUP98P52948 1817 aa10.66□□□□□ -0.7
CDC42BPA-210ENST00000462553 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
CDC42BPA-210ENST00000462553 PRR5LQ6MZQ0 368 aa10.66□□□□□ -0.7
CDC42BPA-210ENST00000462553 ZNF790Q6PG37 636 aa10.66□□□□□ -0.7
CDC42BPA-210ENST00000462553 TTLL6Q8N841 843 aa10.66□□□□□ -0.7
CDC42BPA-210ENST00000462553 SCN4AP35499 1836 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 GLTPD2A6NH11 291 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms