RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 SOS1Q07889 1333 aaPredicted RBP24.94■■□□□ 1.58
SLC6A1-204ENST00000462473 USP42Q9H9J4 1324 aaKnown RBP24.93■■□□□ 1.58
SLC6A1-204ENST00000462473 ZPR1O75312 459 aa24.93■■□□□ 1.58
SLC6A1-204ENST00000462473 GPR162Q16538 588 aa24.93■■□□□ 1.58
SLC6A1-204ENST00000462473 RIPK4P57078 832 aa24.92■■□□□ 1.58
SLC6A1-204ENST00000462473 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
SLC6A1-204ENST00000462473 CCDC146Q8IYE0 955 aa24.91■■□□□ 1.58
SLC6A1-204ENST00000462473 PNISRQ8TF01 805 aaKnown RBP24.91■■□□□ 1.58
SLC6A1-204ENST00000462473 MIS18AQ9NYP9 233 aa24.91■■□□□ 1.58
SLC6A1-204ENST00000462473 COL15A1P39059 1388 aa24.91■■□□□ 1.58
SLC6A1-204ENST00000462473 THUMPD2Q9BTF0 503 aaKnown RBP24.9■■□□□ 1.58
SLC6A1-204ENST00000462473 PARP3Q9Y6F1 533 aa24.9■■□□□ 1.58
SLC6A1-204ENST00000462473 SNRPA1P09661 255 aaKnown RBP24.89■■□□□ 1.58
SLC6A1-204ENST00000462473 FKBP8Q14318 412 aa24.89■■□□□ 1.58
SLC6A1-204ENST00000462473 USPL1Q5W0Q7 1092 aa24.89■■□□□ 1.58
SLC6A1-204ENST00000462473 NARFQ9UHQ1 456 aa24.89■■□□□ 1.58
SLC6A1-204ENST00000462473 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
SLC6A1-204ENST00000462473 TMPOP42166 694 aaKnown RBP24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 RUNDC1Q96C34 613 aa24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 ZNF330Q9Y3S2 320 aaPredicted RBP24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 USP16Q9Y5T5 823 aa24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 C4AP0C0L4 1744 aa24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 DLG5Q8TDM6 1919 aa24.88■■□□□ 1.57
SLC6A1-204ENST00000462473 A0A087WZG4 1122 aa24.87■■□□□ 1.57
SLC6A1-204ENST00000462473 A1BGP04217 495 aa24.87■■□□□ 1.57
SLC6A1-204ENST00000462473 EIF5P55010 431 aaKnown RBP24.87■■□□□ 1.57
SLC6A1-204ENST00000462473 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
SLC6A1-204ENST00000462473 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
SLC6A1-204ENST00000462473 LMOD3Q0VAK6 560 aa24.86■■□□□ 1.57
SLC6A1-204ENST00000462473 NEUROD2Q15784 382 aa24.86■■□□□ 1.57
SLC6A1-204ENST00000462473 RRP7AQ9Y3A4 280 aaKnown RBP24.86■■□□□ 1.57
SLC6A1-204ENST00000462473 YY1P25490 414 aa24.85■■□□□ 1.57
SLC6A1-204ENST00000462473 IL6STP40189 918 aaPredicted RBP24.85■■□□□ 1.57
SLC6A1-204ENST00000462473 TM4SF1P30408 202 aa24.82■■□□□ 1.56
SLC6A1-204ENST00000462473 ANP32CO43423 234 aa24.81■■□□□ 1.56
SLC6A1-204ENST00000462473 DDR1Q08345 913 aa24.81■■□□□ 1.56
SLC6A1-204ENST00000462473 BCL2L12Q9HB09 334 aa24.81■■□□□ 1.56
SLC6A1-204ENST00000462473 TBC1D2BQ9UPU7 963 aa24.81■■□□□ 1.56
SLC6A1-204ENST00000462473 GRIN3BO60391 1043 aa24.8■■□□□ 1.56
SLC6A1-204ENST00000462473 YBX3P16989 372 aaKnown RBP eCLIP24.8■■□□□ 1.56
SLC6A1-204ENST00000462473 PIP4K2AP48426 406 aaPredicted RBP24.8■■□□□ 1.56
SLC6A1-204ENST00000462473 EIF4A1P60842 406 aaKnown RBP24.8■■□□□ 1.56
SLC6A1-204ENST00000462473 TSPYL4Q9UJ04 414 aa24.8■■□□□ 1.56
SLC6A1-204ENST00000462473 POLRMTO00411 1230 aaKnown RBP24.79■■□□□ 1.56
SLC6A1-204ENST00000462473 TGFB2P61812 414 aa24.79■■□□□ 1.56
SLC6A1-204ENST00000462473 NFIXQ14938 502 aa24.78■■□□□ 1.56
SLC6A1-204ENST00000462473 WWC3Q9ULE0 1092 aa24.78■■□□□ 1.56
SLC6A1-204ENST00000462473 C10orf71Q711Q0 1435 aa24.78■■□□□ 1.56
SLC6A1-204ENST00000462473 GIGYF1O75420 1035 aaPredicted RBP24.77■■□□□ 1.56
SLC6A1-204ENST00000462473 CCDC184Q52MB2 194 aa24.76■■□□□ 1.55
SLC6A1-204ENST00000462473 BICDL1Q6ZP65 573 aa24.76■■□□□ 1.55
SLC6A1-204ENST00000462473 DZIP3Q86Y13 1208 aaKnown RBP24.76■■□□□ 1.55
SLC6A1-204ENST00000462473 BABAM1Q9NWV8 329 aa24.76■■□□□ 1.55
SLC6A1-204ENST00000462473 A0A0G2JLW4 131 aa24.75■■□□□ 1.55
SLC6A1-204ENST00000462473 TRIM35Q9UPQ4 493 aa24.75■■□□□ 1.55
SLC6A1-204ENST00000462473 NBPF26B4DH59 902 aa24.74■■□□□ 1.55
SLC6A1-204ENST00000462473 SERPINB2P05120 415 aa24.74■■□□□ 1.55
SLC6A1-204ENST00000462473 NBPF10Q6P3W6 841 aaKnown RBP24.74■■□□□ 1.55
SLC6A1-204ENST00000462473 NBPF15Q8N660 670 aa24.74■■□□□ 1.55
SLC6A1-204ENST00000462473 KDM3BQ7LBC6 1761 aa24.74■■□□□ 1.55
SLC6A1-204ENST00000462473 APAF1O14727 1248 aa24.73■■□□□ 1.55
SLC6A1-204ENST00000462473 CAMTA2O94983 1202 aa24.73■■□□□ 1.55
SLC6A1-204ENST00000462473 DPEP1P16444 411 aa24.73■■□□□ 1.55
SLC6A1-204ENST00000462473 PXDNLA1KZ92 1463 aa24.72■■□□□ 1.55
SLC6A1-204ENST00000462473 TBC1D9BQ66K14 1250 aa24.72■■□□□ 1.55
SLC6A1-204ENST00000462473 LAS1LQ9Y4W2 734 aaKnown RBP24.72■■□□□ 1.55
SLC6A1-204ENST00000462473 KIF13BQ9NQT8 1826 aa24.7■■□□□ 1.55
SLC6A1-204ENST00000462473 MRS2Q9HD23 443 aa24.7■■□□□ 1.54
SLC6A1-204ENST00000462473 CHL1O00533 1208 aa24.68■■□□□ 1.54
SLC6A1-204ENST00000462473 NGEFQ8N5V2 710 aa24.68■■□□□ 1.54
SLC6A1-204ENST00000462473 SETDB2Q96T68 719 aa24.68■■□□□ 1.54
SLC6A1-204ENST00000462473 BCS1LQ9Y276 419 aa24.68■■□□□ 1.54
SLC6A1-204ENST00000462473 ZNF652Q9Y2D9 606 aa24.68■■□□□ 1.54
SLC6A1-204ENST00000462473 CLEC4GQ6UXB4 293 aa24.67■■□□□ 1.54
SLC6A1-204ENST00000462473 MYL6BP14649 208 aa24.66■■□□□ 1.54
SLC6A1-204ENST00000462473 EIF2S2P20042 333 aaKnown RBP24.66■■□□□ 1.54
SLC6A1-204ENST00000462473 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
SLC6A1-204ENST00000462473 SCN7AQ01118 1682 aa24.66■■□□□ 1.54
SLC6A1-204ENST00000462473 LAMB4A4D0S4 1761 aa24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 KCNA3P22001 575 aa24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 CHRNA5P30532 468 aa24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 CARMIL3Q8ND23 1372 aa24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 CHD4Q14839 1912 aa24.65■■□□□ 1.54
SLC6A1-204ENST00000462473 NPHP1O15259 732 aa24.64■■□□□ 1.54
SLC6A1-204ENST00000462473 CFAP44Q96MT7 982 aa24.64■■□□□ 1.54
SLC6A1-204ENST00000462473 KIAA1551Q9HCM1 1747 aa24.64■■□□□ 1.53
SLC6A1-204ENST00000462473 ERBB4Q15303 1308 aa24.63■■□□□ 1.53
SLC6A1-204ENST00000462473 RGL2O15211 777 aa24.62■■□□□ 1.53
SLC6A1-204ENST00000462473 CALD1Q05682 793 aaKnown RBP24.62■■□□□ 1.53
SLC6A1-204ENST00000462473 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 HLFQ16534 295 aa24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 DALRD3Q5D0E6 543 aaKnown RBP24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 PRR5LQ6MZQ0 368 aa24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 KIF6Q6ZMV9 814 aa24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 NIP7Q9Y221 180 aaKnown RBP eCLIP24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 UTRNP46939 3433 aa24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 NRXN2Q9P2S2 1712 aa24.61■■□□□ 1.53
SLC6A1-204ENST00000462473 KRT24Q2M2I5 525 aa24.6■■□□□ 1.53
SLC6A1-204ENST00000462473 CCDC24Q8N4L8 307 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms