RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
COL4A2-203ENST00000462309 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
COL4A2-203ENST00000462309 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
COL4A2-203ENST00000462309 TNFRSF10BO14763 440 aa12.65□□□□□ -0.38
COL4A2-203ENST00000462309 HIRAP54198 1017 aaPredicted RBP12.65□□□□□ -0.38
COL4A2-203ENST00000462309 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
COL4A2-203ENST00000462309 AGBL1Q96MI9 1066 aa12.65□□□□□ -0.38
COL4A2-203ENST00000462309 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
COL4A2-203ENST00000462309 EML1O00423 815 aa12.64□□□□□ -0.39
COL4A2-203ENST00000462309 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
COL4A2-203ENST00000462309 MPSTP25325 297 aa12.64□□□□□ -0.39
COL4A2-203ENST00000462309 PPARGC1BQ86YN6 1023 aaKnown RBP12.64□□□□□ -0.39
COL4A2-203ENST00000462309 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
COL4A2-203ENST00000462309 BCL2L13Q9BXK5 485 aa12.64□□□□□ -0.39
COL4A2-203ENST00000462309 SERTM1A2A2V5 107 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 NOS2P35228 1153 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 STIM2Q9P246 746 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
COL4A2-203ENST00000462309 SMPD1P17405 629 aa12.62□□□□□ -0.39
COL4A2-203ENST00000462309 ZSCAN29Q8IWY8 852 aaPredicted RBP12.62□□□□□ -0.39
COL4A2-203ENST00000462309 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
COL4A2-203ENST00000462309 MEN1O00255 615 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 RELBQ01201 579 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 SH3PXD2AQ5TCZ1 1133 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 RGL4Q8IZJ4 473 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 RBCK1Q9BYM8 510 aa12.61□□□□□ -0.39
COL4A2-203ENST00000462309 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
COL4A2-203ENST00000462309 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
COL4A2-203ENST00000462309 ZNF395Q9H8N7 513 aaPredicted RBP12.6□□□□□ -0.39
COL4A2-203ENST00000462309 EIF1AXP47813 144 aaKnown RBP12.59□□□□□ -0.39
COL4A2-203ENST00000462309 ALKBH2Q6NS38 261 aa12.59□□□□□ -0.39
COL4A2-203ENST00000462309 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
COL4A2-203ENST00000462309 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
COL4A2-203ENST00000462309 TNFRSF10AO00220 468 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 TRIM67Q6ZTA4 783 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 ALDH16A1Q8IZ83 802 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 MEIOBQ8N635 442 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 GIPC2Q8TF65 315 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 CITED4Q96RK1 184 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 KIAA1522Q9P206 1035 aaPredicted RBP12.58□□□□□ -0.4
COL4A2-203ENST00000462309 HCN4Q9Y3Q4 1203 aa12.58□□□□□ -0.4
COL4A2-203ENST00000462309 FZD6O60353 706 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 GPC1P35052 558 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 PRR20EP86478 221 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 PRR20CP86479 221 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 PRR20DP86480 221 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 PRR20BP86481 221 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 PRR20AP86496 221 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 NIFKQ9BYG3 293 aaKnown RBP12.57□□□□□ -0.4
COL4A2-203ENST00000462309 ZNF232Q9UNY5 417 aa12.57□□□□□ -0.4
COL4A2-203ENST00000462309 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
COL4A2-203ENST00000462309 FAM26DQ5JW98 314 aa12.56□□□□□ -0.4
COL4A2-203ENST00000462309 ZBTB39O15060 712 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 NDUFB5O43674 189 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 RTN1Q16799 776 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 C11orf91Q3C1V1 193 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 TMC7Q7Z402 723 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 ABTB2Q8N961 1025 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 RHBDD1Q8TEB9 315 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 HPS1Q92902 700 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 MRRFQ96E11 262 aaKnown RBP12.55□□□□□ -0.4
COL4A2-203ENST00000462309 NGLY1Q96IV0 654 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 PARP3Q9Y6F1 533 aa12.55□□□□□ -0.4
COL4A2-203ENST00000462309 RNF144AP50876 292 aaPredicted RBP12.54□□□□□ -0.4
COL4A2-203ENST00000462309 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
COL4A2-203ENST00000462309 C1orf53Q5VUE5 145 aa12.54□□□□□ -0.4
COL4A2-203ENST00000462309 TMEM214Q6NUQ4 689 aaKnown RBP12.54□□□□□ -0.4
COL4A2-203ENST00000462309 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
COL4A2-203ENST00000462309 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
COL4A2-203ENST00000462309 SPINT1O43278 529 aa12.52□□□□□ -0.41
COL4A2-203ENST00000462309 IGHA2P01877 340 aa12.52□□□□□ -0.41
COL4A2-203ENST00000462309 TAGLNQ01995 201 aaKnown RBP12.52□□□□□ -0.41
COL4A2-203ENST00000462309 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
COL4A2-203ENST00000462309 DGKZQ13574 1117 aa12.51□□□□□ -0.41
COL4A2-203ENST00000462309 ETFBKMTQ8IXQ9 262 aa12.51□□□□□ -0.41
COL4A2-203ENST00000462309 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
COL4A2-203ENST00000462309 TREHO43280 583 aa12.5□□□□□ -0.41
COL4A2-203ENST00000462309 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
COL4A2-203ENST00000462309 AAMPQ13685 434 aa12.5□□□□□ -0.41
COL4A2-203ENST00000462309 DSC3Q14574 896 aa12.5□□□□□ -0.41
COL4A2-203ENST00000462309 INSM2Q96T92 566 aaPredicted RBP12.5□□□□□ -0.41
COL4A2-203ENST00000462309 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
COL4A2-203ENST00000462309 TXLNAP40222 546 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
COL4A2-203ENST00000462309 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 IFT43Q96FT9 208 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 KLK14Q9P0G3 267 aa12.49□□□□□ -0.41
COL4A2-203ENST00000462309 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
COL4A2-203ENST00000462309 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL4A2-203ENST00000462309 ATCAYQ86WG3 371 aa12.48□□□□□ -0.41
COL4A2-203ENST00000462309 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms