RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 NEFMP07197 916 aa21.43■■□□□ 1.02
SNX21-206ENST00000462307 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
SNX21-206ENST00000462307 SRP68Q9UHB9 627 aaKnown RBP21.43■■□□□ 1.02
SNX21-206ENST00000462307 YBX3P16989 372 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNX21-206ENST00000462307 TM4SF1P30408 202 aa21.42■■□□□ 1.02
SNX21-206ENST00000462307 EIF5P55010 431 aaKnown RBP21.42■■□□□ 1.02
SNX21-206ENST00000462307 FKBP8Q14318 412 aa21.42■■□□□ 1.02
SNX21-206ENST00000462307 NARFQ9UHQ1 456 aa21.42■■□□□ 1.02
SNX21-206ENST00000462307 GRIN3BO60391 1043 aa21.41■■□□□ 1.02
SNX21-206ENST00000462307 TAF7Q15545 349 aaPredicted RBP21.41■■□□□ 1.02
SNX21-206ENST00000462307 NFE2L2Q16236 605 aa21.41■■□□□ 1.02
SNX21-206ENST00000462307 ZPR1O75312 459 aa21.4■■□□□ 1.02
SNX21-206ENST00000462307 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
SNX21-206ENST00000462307 COL15A1P39059 1388 aa21.39■■□□□ 1.02
SNX21-206ENST00000462307 TGFB2P61812 414 aa21.39■■□□□ 1.01
SNX21-206ENST00000462307 USPL1Q5W0Q7 1092 aa21.39■■□□□ 1.01
SNX21-206ENST00000462307 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
SNX21-206ENST00000462307 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
SNX21-206ENST00000462307 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
SNX21-206ENST00000462307 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
SNX21-206ENST00000462307 BCL2L12Q9HB09 334 aa21.37■■□□□ 1.01
SNX21-206ENST00000462307 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
SNX21-206ENST00000462307 C10orf71Q711Q0 1435 aa21.37■■□□□ 1.01
SNX21-206ENST00000462307 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
SNX21-206ENST00000462307 SNRPA1P09661 255 aaKnown RBP21.36■■□□□ 1.01
SNX21-206ENST00000462307 DDR1Q08345 913 aa21.36■■□□□ 1.01
SNX21-206ENST00000462307 PELP1Q8IZL8 1130 aaKnown RBP21.36■■□□□ 1.01
SNX21-206ENST00000462307 A0A087WZG4 1122 aa21.35■■□□□ 1.01
SNX21-206ENST00000462307 A1BGP04217 495 aa21.35■■□□□ 1.01
SNX21-206ENST00000462307 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
SNX21-206ENST00000462307 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
SNX21-206ENST00000462307 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
SNX21-206ENST00000462307 N4BP2Q86UW6 1770 aaPredicted RBP21.34■■□□□ 1.01
SNX21-206ENST00000462307 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
SNX21-206ENST00000462307 NFIXQ14938 502 aa21.33■■□□□ 1.01
SNX21-206ENST00000462307 AFDNP55196 1824 aaKnown RBP21.33■■□□□ 1.01
SNX21-206ENST00000462307 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
SNX21-206ENST00000462307 KCNA3P22001 575 aa21.32■■□□□ 1
SNX21-206ENST00000462307 TMPOP42166 694 aaKnown RBP21.32■■□□□ 1
SNX21-206ENST00000462307 MIS18AQ9NYP9 233 aa21.32■■□□□ 1
SNX21-206ENST00000462307 KDM3BQ7LBC6 1761 aa21.32■■□□□ 1
SNX21-206ENST00000462307 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
SNX21-206ENST00000462307 A0A0G2JLW4 131 aa21.31■■□□□ 1
SNX21-206ENST00000462307 RIPK4P57078 832 aa21.31■■□□□ 1
SNX21-206ENST00000462307 ZNF784Q8NCA9 323 aaPredicted RBP21.3■■□□□ 1
SNX21-206ENST00000462307 DPEP1P16444 411 aa21.29■■□□□ 1
SNX21-206ENST00000462307 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
SNX21-206ENST00000462307 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
SNX21-206ENST00000462307 TBC1D2BQ9UPU7 963 aa21.29■■□□□ 1
SNX21-206ENST00000462307 GIGYF1O75420 1035 aaPredicted RBP21.28■■□□□ 1
SNX21-206ENST00000462307 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
SNX21-206ENST00000462307 RUNDC1Q96C34 613 aa21.28■■□□□ 1
SNX21-206ENST00000462307 BABAM1Q9NWV8 329 aa21.28■■□□□ 1
SNX21-206ENST00000462307 CAMTA2O94983 1202 aa21.27■■□□□ 1
SNX21-206ENST00000462307 SERPINB2P05120 415 aa21.27■■□□□ 1
SNX21-206ENST00000462307 NBPF26B4DH59 902 aa21.26■□□□□ 0.99
SNX21-206ENST00000462307 WDR43Q15061 677 aaKnown RBP eCLIP21.26■□□□□ 0.99
SNX21-206ENST00000462307 NBPF10Q6P3W6 841 aaKnown RBP21.26■□□□□ 0.99
SNX21-206ENST00000462307 NBPF15Q8N660 670 aa21.26■□□□□ 0.99
SNX21-206ENST00000462307 SCN7AQ01118 1682 aa21.25■□□□□ 0.99
SNX21-206ENST00000462307 RGL2O15211 777 aa21.25■□□□□ 0.99
SNX21-206ENST00000462307 LMOD3Q0VAK6 560 aa21.25■□□□□ 0.99
SNX21-206ENST00000462307 TBC1D9BQ66K14 1250 aa21.25■□□□□ 0.99
SNX21-206ENST00000462307 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
SNX21-206ENST00000462307 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
SNX21-206ENST00000462307 LAMB4A4D0S4 1761 aa21.24■□□□□ 0.99
SNX21-206ENST00000462307 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
SNX21-206ENST00000462307 DZIP3Q86Y13 1208 aaKnown RBP21.24■□□□□ 0.99
SNX21-206ENST00000462307 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
SNX21-206ENST00000462307 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
SNX21-206ENST00000462307 WWC3Q9ULE0 1092 aa21.24■□□□□ 0.99
SNX21-206ENST00000462307 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
SNX21-206ENST00000462307 ARFGEF1Q9Y6D6 1849 aa21.24■□□□□ 0.99
SNX21-206ENST00000462307 BCORQ6W2J9 1755 aa21.23■□□□□ 0.99
SNX21-206ENST00000462307 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
SNX21-206ENST00000462307 TRIM35Q9UPQ4 493 aa21.23■□□□□ 0.99
SNX21-206ENST00000462307 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
SNX21-206ENST00000462307 BICDL1Q6ZP65 573 aa21.21■□□□□ 0.99
SNX21-206ENST00000462307 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
SNX21-206ENST00000462307 CHRNA5P30532 468 aa21.2■□□□□ 0.98
SNX21-206ENST00000462307 SETDB2Q96T68 719 aa21.2■□□□□ 0.98
SNX21-206ENST00000462307 RRP7AQ9Y3A4 280 aaKnown RBP21.2■□□□□ 0.98
SNX21-206ENST00000462307 CHL1O00533 1208 aa21.19■□□□□ 0.98
SNX21-206ENST00000462307 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
SNX21-206ENST00000462307 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
SNX21-206ENST00000462307 DALRD3Q5D0E6 543 aaKnown RBP21.18■□□□□ 0.98
SNX21-206ENST00000462307 CARMIL3Q8ND23 1372 aa21.18■□□□□ 0.98
SNX21-206ENST00000462307 DLEC1Q9Y238 1755 aa21.18■□□□□ 0.98
SNX21-206ENST00000462307 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
SNX21-206ENST00000462307 BRIP1Q9BX63 1249 aa21.17■□□□□ 0.98
SNX21-206ENST00000462307 PDZRN3Q9UPQ7 1066 aa21.17■□□□□ 0.98
SNX21-206ENST00000462307 ADCY9O60503 1353 aa21.17■□□□□ 0.98
SNX21-206ENST00000462307 ERBB4Q15303 1308 aa21.16■□□□□ 0.98
SNX21-206ENST00000462307 ZNF652Q9Y2D9 606 aa21.16■□□□□ 0.98
SNX21-206ENST00000462307 NUP98P52948 1817 aa21.15■□□□□ 0.98
SNX21-206ENST00000462307 ERVV-1B6SEH8 477 aa21.15■□□□□ 0.98
SNX21-206ENST00000462307 H0YIN7 160 aa21.14■□□□□ 0.97
SNX21-206ENST00000462307 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
SNX21-206ENST00000462307 ARHGAP27Q6ZUM4 889 aa21.14■□□□□ 0.97
SNX21-206ENST00000462307 LRP10Q7Z4F1 713 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms