RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
PBRM1-219ENST00000462207 COL5A3P25940 1745 aaPredicted RBP17.29■□□□□ 0.36
PBRM1-219ENST00000462207 A1BGP04217 495 aa17.29■□□□□ 0.36
PBRM1-219ENST00000462207 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
PBRM1-219ENST00000462207 G2E3Q7L622 706 aa17.29■□□□□ 0.36
PBRM1-219ENST00000462207 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
PBRM1-219ENST00000462207 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
PBRM1-219ENST00000462207 APBA3O96018 575 aa17.28■□□□□ 0.36
PBRM1-219ENST00000462207 RRP1P56182 461 aaKnown RBP17.28■□□□□ 0.36
PBRM1-219ENST00000462207 PDIA6Q15084 440 aa17.28■□□□□ 0.36
PBRM1-219ENST00000462207 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
PBRM1-219ENST00000462207 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
PBRM1-219ENST00000462207 CYP19A1P11511 503 aaPredicted RBP17.27■□□□□ 0.36
PBRM1-219ENST00000462207 LINC00116Q8NCU8 138 aa17.27■□□□□ 0.36
PBRM1-219ENST00000462207 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
PBRM1-219ENST00000462207 NBPF26B4DH59 902 aa17.27■□□□□ 0.35
PBRM1-219ENST00000462207 NBPF14Q5TI25 921 aa17.27■□□□□ 0.35
PBRM1-219ENST00000462207 NBPF10Q6P3W6 841 aaKnown RBP17.27■□□□□ 0.35
PBRM1-219ENST00000462207 NBPF15Q8N660 670 aa17.27■□□□□ 0.35
PBRM1-219ENST00000462207 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.35
PBRM1-219ENST00000462207 MYL6BP14649 208 aa17.26■□□□□ 0.35
PBRM1-219ENST00000462207 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
PBRM1-219ENST00000462207 LRRC4BQ9NT99 713 aa17.26■□□□□ 0.35
PBRM1-219ENST00000462207 DBF4Q9UBU7 674 aaPredicted RBP17.26■□□□□ 0.35
PBRM1-219ENST00000462207 STARD3NLO95772 234 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
PBRM1-219ENST00000462207 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
PBRM1-219ENST00000462207 ZBTB1Q9Y2K1 713 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 RREB1Q92766 1687 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 TAF1LQ8IZX4 1826 aa17.25■□□□□ 0.35
PBRM1-219ENST00000462207 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
PBRM1-219ENST00000462207 CRKLP46109 303 aaKnown RBP17.24■□□□□ 0.35
PBRM1-219ENST00000462207 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
PBRM1-219ENST00000462207 IRX6P78412 446 aaPredicted RBP17.24■□□□□ 0.35
PBRM1-219ENST00000462207 PROM2Q8N271 834 aa17.24■□□□□ 0.35
PBRM1-219ENST00000462207 FLIIQ13045 1269 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 RGPD3A6NKT7 1758 aaPredicted RBP17.23■□□□□ 0.35
PBRM1-219ENST00000462207 PLSCR1O15162 318 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
PBRM1-219ENST00000462207 RGPD4Q7Z3J3 1758 aa17.23■□□□□ 0.35
PBRM1-219ENST00000462207 MYH14Q7Z406 1995 aaKnown RBP17.23■□□□□ 0.35
PBRM1-219ENST00000462207 C4BP0C0L5 1744 aa17.22■□□□□ 0.35
PBRM1-219ENST00000462207 TRIM27P14373 513 aa17.22■□□□□ 0.35
PBRM1-219ENST00000462207 CHMP4AQ9BY43 222 aa17.22■□□□□ 0.35
PBRM1-219ENST00000462207 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
PBRM1-219ENST00000462207 ZNF330Q9Y3S2 320 aaPredicted RBP17.22■□□□□ 0.35
PBRM1-219ENST00000462207 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
PBRM1-219ENST00000462207 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
PBRM1-219ENST00000462207 CLUAP1Q96AJ1 413 aa17.21■□□□□ 0.35
PBRM1-219ENST00000462207 HYPKQ9NX55 129 aa17.21■□□□□ 0.35
PBRM1-219ENST00000462207 EN1Q05925 392 aaPredicted RBP17.21■□□□□ 0.35
PBRM1-219ENST00000462207 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
PBRM1-219ENST00000462207 XAGE3Q8WTP9 111 aa17.21■□□□□ 0.35
PBRM1-219ENST00000462207 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 CACNA1FO60840 1977 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 RLBP1P12271 317 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 FKBP5Q13451 457 aaPredicted RBP17.2■□□□□ 0.34
PBRM1-219ENST00000462207 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
PBRM1-219ENST00000462207 F6X3S4 739 aa17.19■□□□□ 0.34
PBRM1-219ENST00000462207 EZH2Q15910 746 aaKnown RBP17.19■□□□□ 0.34
PBRM1-219ENST00000462207 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
PBRM1-219ENST00000462207 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
PBRM1-219ENST00000462207 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
PBRM1-219ENST00000462207 PTPRCP08575 1304 aa17.19■□□□□ 0.34
PBRM1-219ENST00000462207 SF3B2Q13435 895 aaKnown RBP17.19■□□□□ 0.34
PBRM1-219ENST00000462207 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
PBRM1-219ENST00000462207 ADCY9O60503 1353 aa17.18■□□□□ 0.34
PBRM1-219ENST00000462207 IPO8O15397 1037 aaKnown RBP17.18■□□□□ 0.34
PBRM1-219ENST00000462207 ILDR2Q71H61 639 aa17.18■□□□□ 0.34
PBRM1-219ENST00000462207 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
PBRM1-219ENST00000462207 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
PBRM1-219ENST00000462207 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
PBRM1-219ENST00000462207 GNPATO15228 680 aa17.17■□□□□ 0.34
PBRM1-219ENST00000462207 API5Q9BZZ5 524 aaKnown RBP17.17■□□□□ 0.34
PBRM1-219ENST00000462207 ABCC4O15439 1325 aa17.16■□□□□ 0.34
PBRM1-219ENST00000462207 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
PBRM1-219ENST00000462207 BAG6P46379 1132 aa17.16■□□□□ 0.34
PBRM1-219ENST00000462207 EIF5P55010 431 aaKnown RBP17.16■□□□□ 0.34
PBRM1-219ENST00000462207 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
PBRM1-219ENST00000462207 NUP188Q5SRE5 1749 aa17.16■□□□□ 0.34
PBRM1-219ENST00000462207 PI4KAP2A4QPH2 592 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
PBRM1-219ENST00000462207 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
PBRM1-219ENST00000462207 PI4KAP1Q8N8J0 262 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 COL15A1P39059 1388 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 AK7Q96M32 723 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 ARXQ96QS3 562 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
PBRM1-219ENST00000462207 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
PBRM1-219ENST00000462207 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
PBRM1-219ENST00000462207 CRBNQ96SW2 442 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms