RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 TUBB4AP04350 444 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 TTC22Q5TAA0 569 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 EXOC6BQ9Y2D4 811 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 ARHGEF5Q12774 1597 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 GPATCH8Q9UKJ3 1502 aaKnown RBP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 ZNF75DP51815 510 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 CORO7P57737 925 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 C11orf91Q3C1V1 193 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 ZSCAN16Q9H4T2 348 aaPredicted RBP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC01140-201ENST00000461990 DIP2BQ9P265 1576 aa10.91□□□□□ -0.66
LINC01140-201ENST00000461990 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
LINC01140-201ENST00000461990 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
LINC01140-201ENST00000461990 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.66
LINC01140-201ENST00000461990 SSH1Q8WYL5 1049 aa10.9□□□□□ -0.66
LINC01140-201ENST00000461990 U2SURPO15042 1029 aaKnown RBP10.9□□□□□ -0.66
LINC01140-201ENST00000461990 TMCO3Q6UWJ1 677 aa10.9□□□□□ -0.66
LINC01140-201ENST00000461990 PLEKHM2Q8IWE5 1019 aa10.9□□□□□ -0.66
LINC01140-201ENST00000461990 SPAG9O60271 1321 aaKnown RBP10.9□□□□□ -0.66
LINC01140-201ENST00000461990 TUBGCP6Q96RT7 1819 aa10.9□□□□□ -0.67
LINC01140-201ENST00000461990 KIAA1210Q9ULL0 1709 aa10.9□□□□□ -0.67
LINC01140-201ENST00000461990 GOLIM4O00461 696 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 MAP2K2P36507 400 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 BSDC1Q9NW68 430 aaPredicted RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 NOB1Q9ULX3 412 aaKnown RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 GLI2P10070 1586 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 ABCA6Q8N139 1617 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 DUOX2Q9NRD8 1548 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 EIF3CLB5ME19 914 aaKnown RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 TICAM2Q86XR7 235 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 RNF217Q8TC41 542 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 SGSM3Q96HU1 749 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 EIF3CQ99613 913 aaKnown RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 RGS12O14924 1447 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 OAS2P29728 719 aaKnown RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 ERCC6LQ2NKX8 1250 aa10.89□□□□□ -0.67
LINC01140-201ENST00000461990 FOXD4L5Q5VV16 416 aaPredicted RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
LINC01140-201ENST00000461990 IRF6O14896 467 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 POLR3GO15318 223 aaPredicted RBP10.88□□□□□ -0.67
LINC01140-201ENST00000461990 GIMAP6Q6P9H5 292 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 LRRC8AQ8IWT6 810 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 TDRD7Q8NHU6 1098 aaKnown RBP10.88□□□□□ -0.67
LINC01140-201ENST00000461990 ZNF592Q92610 1267 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 TPM1P09493 284 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 CALRP27797 417 aaKnown RBP10.88□□□□□ -0.67
LINC01140-201ENST00000461990 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 ORC3Q9UBD5 711 aaPredicted RBP10.88□□□□□ -0.67
LINC01140-201ENST00000461990 NRBP1Q9UHY1 535 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 SPHKAPQ2M3C7 1700 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 IL16Q14005 1332 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 C9orf84Q5VXU9 1444 aa10.88□□□□□ -0.67
LINC01140-201ENST00000461990 ALDH1L2Q3SY69 923 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 EFCAB13Q8IY85 973 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 TBC1D22AQ8WUA7 517 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 SRCIN1Q9C0H9 1055 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
LINC01140-201ENST00000461990 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
LINC01140-201ENST00000461990 C21orf2O43822 256 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 DNAJC21Q5F1R6 531 aaKnown RBP10.87□□□□□ -0.67
LINC01140-201ENST00000461990 CCAR2Q8N163 923 aaKnown RBP10.87□□□□□ -0.67
LINC01140-201ENST00000461990 USP27XA6NNY8 438 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 SMC1AQ14683 1233 aaKnown RBP10.87□□□□□ -0.67
LINC01140-201ENST00000461990 JMYQ8N9B5 988 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 ADAM21Q9UKJ8 722 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 MRVI1Q9Y6F6 885 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
LINC01140-201ENST00000461990 ABCA8O94911 1581 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 IQGAP3Q86VI3 1631 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 ZC3H13Q5T200 1668 aaKnown RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 SGSM2O43147 1006 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 ANAPC15P60006 121 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 ARHGAP29Q52LW3 1261 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 SARM1Q6SZW1 724 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 MSL3Q8N5Y2 521 aaKnown RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 RRP7AQ9Y3A4 280 aaKnown RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 LEKR1Q6ZMV7 388 aa10.86□□□□□ -0.67
LINC01140-201ENST00000461990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 TROQ12816 1431 aaPredicted RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 ZCCHC11Q5TAX3 1644 aaKnown RBP10.86□□□□□ -0.67
LINC01140-201ENST00000461990 NUP153P49790 1475 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 RAPGEF6Q8TEU7 1601 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 A1CFQ9NQ94 594 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 CNPY2Q9Y2B0 182 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 CASTP20810 708 aaKnown RBP10.85□□□□□ -0.67
LINC01140-201ENST00000461990 KCNJ6P48051 423 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 E2F4Q16254 413 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
LINC01140-201ENST00000461990 CCDC144CPQ8IYA2 1237 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms