RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 MAPK8IP2Q13387 824 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-219ENST00000461159 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
HDAC9-219ENST00000461159 PLEKHO1Q53GL0 409 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-219ENST00000461159 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.73
HDAC9-219ENST00000461159 IFT57Q9NWB7 429 aa10.46□□□□□ -0.73
HDAC9-219ENST00000461159 CRB1P82279 1406 aa10.46□□□□□ -0.73
HDAC9-219ENST00000461159 KCNQ3O43525 872 aa10.46□□□□□ -0.74
HDAC9-219ENST00000461159 VAMP4O75379 141 aa10.46□□□□□ -0.74
HDAC9-219ENST00000461159 CT47B1P0C2W7 299 aaPredicted RBP10.46□□□□□ -0.74
HDAC9-219ENST00000461159 DDX54Q8TDD1 881 aaKnown RBP10.46□□□□□ -0.74
HDAC9-219ENST00000461159 COG6Q9Y2V7 657 aa10.46□□□□□ -0.74
HDAC9-219ENST00000461159 MEGF6O75095 1541 aa10.46□□□□□ -0.74
HDAC9-219ENST00000461159 WDR17Q8IZU2 1322 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 TATP17735 454 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-219ENST00000461159 C1orf141Q5JVX7 400 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 CC2D2BQ6DHV5 1058 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 PRDM16Q9HAZ2 1276 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 CHL1O00533 1208 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 SEC24BO95487 1268 aa10.45□□□□□ -0.74
HDAC9-219ENST00000461159 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-219ENST00000461159 COL5A2P05997 1499 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-219ENST00000461159 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 CYP27B1O15528 508 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 HSPA1LP34931 641 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-219ENST00000461159 EGFL6Q8IUX8 553 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 TBC1D32Q96NH3 1257 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 ANTXR1Q9H6X2 564 aa10.44□□□□□ -0.74
HDAC9-219ENST00000461159 TEFQ10587 303 aa10.43□□□□□ -0.74
HDAC9-219ENST00000461159 CERS3Q8IU89 383 aa10.43□□□□□ -0.74
HDAC9-219ENST00000461159 NOB1Q9ULX3 412 aaKnown RBP10.43□□□□□ -0.74
HDAC9-219ENST00000461159 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
HDAC9-219ENST00000461159 AKAP4Q5JQC9 854 aa10.43□□□□□ -0.74
HDAC9-219ENST00000461159 TRIM27P14373 513 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 AMOTQ4VCS5 1084 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 RWDD1Q9H446 243 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-219ENST00000461159 AHDC1Q5TGY3 1603 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-219ENST00000461159 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 ANAPC15P60006 121 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-219ENST00000461159 NFATC2IPQ8NCF5 419 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 COL16A1Q07092 1604 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-219ENST00000461159 NCAPD2Q15021 1401 aa10.42□□□□□ -0.74
HDAC9-219ENST00000461159 RNMTO43148 476 aaKnown RBP10.41□□□□□ -0.74
HDAC9-219ENST00000461159 GPATCH11Q8N954 259 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 TBC1D2Q9BYX2 928 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 A0A0G2JS52 829 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 PRAMEF22A3QJZ6 481 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 PHKG2P15735 406 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
HDAC9-219ENST00000461159 NGLY1Q96IV0 654 aa10.41□□□□□ -0.74
HDAC9-219ENST00000461159 MAFGO15525 162 aa10.4□□□□□ -0.74
HDAC9-219ENST00000461159 IL2RBP14784 551 aa10.4□□□□□ -0.74
HDAC9-219ENST00000461159 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
HDAC9-219ENST00000461159 SPG7Q9UQ90 795 aa10.4□□□□□ -0.74
HDAC9-219ENST00000461159 FAM208AQ9UK61 1670 aaKnown RBP10.4□□□□□ -0.74
HDAC9-219ENST00000461159 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
HDAC9-219ENST00000461159 ZCRB1Q8TBF4 217 aaKnown RBP10.4□□□□□ -0.74
HDAC9-219ENST00000461159 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.75
HDAC9-219ENST00000461159 ANXA1P04083 346 aa10.39□□□□□ -0.75
HDAC9-219ENST00000461159 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
HDAC9-219ENST00000461159 GOLGB1Q14789 3259 aaKnown RBP10.39□□□□□ -0.75
HDAC9-219ENST00000461159 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
HDAC9-219ENST00000461159 MCM4P33991 863 aa10.39□□□□□ -0.75
HDAC9-219ENST00000461159 ZKSCAN2Q63HK3 967 aa10.39□□□□□ -0.75
HDAC9-219ENST00000461159 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
HDAC9-219ENST00000461159 ATF7IPQ6VMQ6 1270 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 PCDHB15Q9Y5E8 787 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 FSD2A1L4K1 749 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 SLC4A2P04920 1241 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 G2E3Q7L622 706 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 TMEM57Q8N5G2 664 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 ZNF428Q96B54 188 aa10.38□□□□□ -0.75
HDAC9-219ENST00000461159 XRCC6P12956 609 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC9-219ENST00000461159 PIP4K2AP48426 406 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-219ENST00000461159 DZIP1LQ8IYY4 767 aaKnown RBP10.37□□□□□ -0.75
HDAC9-219ENST00000461159 SH3BP1Q9Y3L3 701 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-219ENST00000461159 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 HSP90AB3PQ58FF7 597 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 NBPF11Q86T75 865 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 ITPRIPQ8IWB1 547 aa10.37□□□□□ -0.75
HDAC9-219ENST00000461159 SYTL4Q96C24 671 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-219ENST00000461159 ESPNB1AK53 854 aa10.36□□□□□ -0.75
HDAC9-219ENST00000461159 F6X3S4 739 aa10.36□□□□□ -0.75
HDAC9-219ENST00000461159 MRE11P49959 708 aa10.36□□□□□ -0.75
HDAC9-219ENST00000461159 EIF4A1P60842 406 aaKnown RBP10.36□□□□□ -0.75
HDAC9-219ENST00000461159 FAM98CQ17RN3 349 aaKnown RBP10.36□□□□□ -0.75
HDAC9-219ENST00000461159 KIAA1211Q6ZU35 1233 aa10.36□□□□□ -0.75
HDAC9-219ENST00000461159 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-219ENST00000461159 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
HDAC9-219ENST00000461159 OVOS2A0A0G2JMS6 1433 aa10.35□□□□□ -0.75
HDAC9-219ENST00000461159 TTC36A6NLP5 189 aa10.35□□□□□ -0.75
HDAC9-219ENST00000461159 CABP4P57796 275 aa10.35□□□□□ -0.75
HDAC9-219ENST00000461159 MVPQ14764 893 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms