RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
APTX-210ENST00000460945 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
APTX-210ENST00000460945 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
APTX-210ENST00000460945 COL15A1P39059 1388 aa21.98■■□□□ 1.11
APTX-210ENST00000460945 STARD3NLO95772 234 aa21.97■■□□□ 1.11
APTX-210ENST00000460945 FMNL2Q96PY5 1086 aa21.97■■□□□ 1.11
APTX-210ENST00000460945 PARP3Q9Y6F1 533 aa21.97■■□□□ 1.11
APTX-210ENST00000460945 AFDNP55196 1824 aaKnown RBP21.96■■□□□ 1.11
APTX-210ENST00000460945 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
APTX-210ENST00000460945 ZPR1O75312 459 aa21.96■■□□□ 1.11
APTX-210ENST00000460945 DDR1Q08345 913 aa21.96■■□□□ 1.11
APTX-210ENST00000460945 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
APTX-210ENST00000460945 GRIN3BO60391 1043 aa21.95■■□□□ 1.1
APTX-210ENST00000460945 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
APTX-210ENST00000460945 BRCA1P38398 1863 aaKnown RBP21.94■■□□□ 1.1
APTX-210ENST00000460945 NEFMP07197 916 aa21.94■■□□□ 1.1
APTX-210ENST00000460945 TM4SF1P30408 202 aa21.94■■□□□ 1.1
APTX-210ENST00000460945 NARFQ9UHQ1 456 aa21.94■■□□□ 1.1
APTX-210ENST00000460945 PRAMEF22A3QJZ6 481 aa21.93■■□□□ 1.1
APTX-210ENST00000460945 A1BGP04217 495 aa21.93■■□□□ 1.1
APTX-210ENST00000460945 EIF5P55010 431 aaKnown RBP21.93■■□□□ 1.1
APTX-210ENST00000460945 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
APTX-210ENST00000460945 TEX13AQ9BXU3 409 aaPredicted RBP21.93■■□□□ 1.1
APTX-210ENST00000460945 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
APTX-210ENST00000460945 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
APTX-210ENST00000460945 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
APTX-210ENST00000460945 ZNF784Q8NCA9 323 aaPredicted RBP21.92■■□□□ 1.1
APTX-210ENST00000460945 BCL2L12Q9HB09 334 aa21.92■■□□□ 1.1
APTX-210ENST00000460945 MIS18AQ9NYP9 233 aa21.92■■□□□ 1.1
APTX-210ENST00000460945 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
APTX-210ENST00000460945 MAPK8IP3Q9UPT6 1336 aa21.9■■□□□ 1.1
APTX-210ENST00000460945 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
APTX-210ENST00000460945 DPEP1P16444 411 aa21.9■■□□□ 1.1
APTX-210ENST00000460945 TGFB2P61812 414 aa21.9■■□□□ 1.1
APTX-210ENST00000460945 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
APTX-210ENST00000460945 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
APTX-210ENST00000460945 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
APTX-210ENST00000460945 SCN7AQ01118 1682 aa21.89■■□□□ 1.1
APTX-210ENST00000460945 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
APTX-210ENST00000460945 NFIXQ14938 502 aa21.89■■□□□ 1.09
APTX-210ENST00000460945 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
APTX-210ENST00000460945 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.09
APTX-210ENST00000460945 TBC1D2BQ9UPU7 963 aa21.88■■□□□ 1.09
APTX-210ENST00000460945 A0A087WZG4 1122 aa21.87■■□□□ 1.09
APTX-210ENST00000460945 IL6STP40189 918 aaPredicted RBP21.87■■□□□ 1.09
APTX-210ENST00000460945 SNRPA1P09661 255 aaKnown RBP21.86■■□□□ 1.09
APTX-210ENST00000460945 KCNA3P22001 575 aa21.86■■□□□ 1.09
APTX-210ENST00000460945 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
APTX-210ENST00000460945 LAMB4A4D0S4 1761 aa21.86■■□□□ 1.09
APTX-210ENST00000460945 BCORQ6W2J9 1755 aa21.86■■□□□ 1.09
APTX-210ENST00000460945 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
APTX-210ENST00000460945 BICDL1Q6ZP65 573 aa21.85■■□□□ 1.09
APTX-210ENST00000460945 CCDC146Q8IYE0 955 aa21.85■■□□□ 1.09
APTX-210ENST00000460945 ARFGEF1Q9Y6D6 1849 aa21.85■■□□□ 1.09
APTX-210ENST00000460945 BCS1LQ9Y276 419 aa21.84■■□□□ 1.09
APTX-210ENST00000460945 SERPINB2P05120 415 aa21.83■■□□□ 1.09
APTX-210ENST00000460945 CHRNA5P30532 468 aa21.83■■□□□ 1.09
APTX-210ENST00000460945 RIPK4P57078 832 aa21.83■■□□□ 1.09
APTX-210ENST00000460945 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
APTX-210ENST00000460945 ANKRD31Q8N7Z5 1873 aa21.81■■□□□ 1.08
APTX-210ENST00000460945 NBPF26B4DH59 902 aa21.81■■□□□ 1.08
APTX-210ENST00000460945 CAMTA2O94983 1202 aa21.81■■□□□ 1.08
APTX-210ENST00000460945 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
APTX-210ENST00000460945 NBPF10Q6P3W6 841 aaKnown RBP21.81■■□□□ 1.08
APTX-210ENST00000460945 NBPF15Q8N660 670 aa21.81■■□□□ 1.08
APTX-210ENST00000460945 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
APTX-210ENST00000460945 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
APTX-210ENST00000460945 DLEC1Q9Y238 1755 aa21.8■■□□□ 1.08
APTX-210ENST00000460945 EIF4A1P60842 406 aaKnown RBP21.8■■□□□ 1.08
APTX-210ENST00000460945 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
APTX-210ENST00000460945 DZIP3Q86Y13 1208 aaKnown RBP21.8■■□□□ 1.08
APTX-210ENST00000460945 ADAMTS8Q9UP79 889 aa21.8■■□□□ 1.08
APTX-210ENST00000460945 CARMIL3Q8ND23 1372 aa21.79■■□□□ 1.08
APTX-210ENST00000460945 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
APTX-210ENST00000460945 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
APTX-210ENST00000460945 PIM2Q9P1W9 311 aa21.79■■□□□ 1.08
APTX-210ENST00000460945 GIGYF1O75420 1035 aaPredicted RBP21.78■■□□□ 1.08
APTX-210ENST00000460945 ARHGAP27Q6ZUM4 889 aa21.77■■□□□ 1.08
APTX-210ENST00000460945 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
APTX-210ENST00000460945 RUNDC1Q96C34 613 aa21.76■■□□□ 1.07
APTX-210ENST00000460945 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
APTX-210ENST00000460945 DALRD3Q5D0E6 543 aaKnown RBP21.75■■□□□ 1.07
APTX-210ENST00000460945 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
APTX-210ENST00000460945 NUP98P52948 1817 aa21.74■■□□□ 1.07
APTX-210ENST00000460945 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
APTX-210ENST00000460945 COL11A2P13942 1736 aaPredicted RBP21.74■■□□□ 1.07
APTX-210ENST00000460945 ADCY9O60503 1353 aa21.74■■□□□ 1.07
APTX-210ENST00000460945 SBF1O95248 1867 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 PRR5LQ6MZQ0 368 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 NGEFQ8N5V2 710 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
APTX-210ENST00000460945 C2CD5Q86YS7 1000 aa21.72■■□□□ 1.07
APTX-210ENST00000460945 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
APTX-210ENST00000460945 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
APTX-210ENST00000460945 CCDC184Q52MB2 194 aa21.7■■□□□ 1.06
APTX-210ENST00000460945 CLEC4GQ6UXB4 293 aa21.7■■□□□ 1.06
APTX-210ENST00000460945 ZNF316A6NFI3 1004 aaPredicted RBP21.69■■□□□ 1.06
APTX-210ENST00000460945 H0YIN7 160 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms