RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 GPR25O00155 361 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 SMTNP53814 917 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 MAP3K10Q02779 954 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 NCOA4Q13772 614 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 EFHC2Q5JST6 749 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 AIDAQ96BJ3 306 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 PSMG3-AS1Q96PY0 264 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 NIFKQ9BYG3 293 aaKnown RBP5.04□□□□□ -1.6
HPS3-203ENST00000460822 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 PHF24Q9UPV7 400 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 MTMR7Q9Y216 660 aa5.04□□□□□ -1.6
HPS3-203ENST00000460822 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 PHF20L1A8MW92 1017 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 ITGB2P05107 769 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 ATP1A2P50993 1020 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 SCNN1DP51172 638 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 SRSF11Q05519 484 aaKnown RBP5.03□□□□□ -1.6
HPS3-203ENST00000460822 TBC1D9Q6ZT07 1266 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 DEPDC4Q8N2C3 294 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 DCAF5Q96JK2 942 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 MBIPQ9NS73 344 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 USTQ9Y2C2 406 aa5.03□□□□□ -1.6
HPS3-203ENST00000460822 PALM3A6NDB9 673 aaPredicted RBP5.02□□□□□ -1.61
HPS3-203ENST00000460822 ADAMTS2O95450 1211 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 CELA2BP08218 269 aaPredicted RBP5.02□□□□□ -1.61
HPS3-203ENST00000460822 MSX1P28360 303 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 SRPK2P78362 688 aaKnown RBP5.02□□□□□ -1.61
HPS3-203ENST00000460822 LBRQ14739 615 aaKnown RBP5.02□□□□□ -1.61
HPS3-203ENST00000460822 UCN2Q96RP3 112 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 ENAMQ9NRM1 1142 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 CABP1Q9NZU7 370 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 A6NJY4 79 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 BRD1O95696 1058 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 MX2P20592 715 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 NBPF1Q3BBV0 1214 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 RUBCNLQ9H714 662 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 PCDHGA11Q9Y5H2 935 aa5.02□□□□□ -1.61
HPS3-203ENST00000460822 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 PATL2C9JE40 543 aaKnown RBP5.01□□□□□ -1.61
HPS3-203ENST00000460822 CDK2AP1O14519 115 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 ATP9BO43861 1147 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 PROCP04070 461 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 TATP17735 454 aaPredicted RBP5.01□□□□□ -1.61
HPS3-203ENST00000460822 LMOD1P29536 600 aaPredicted RBP5.01□□□□□ -1.61
HPS3-203ENST00000460822 PLEKHM2Q8IWE5 1019 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 FOXD4L4Q8WXT5 416 aaPredicted RBP5.01□□□□□ -1.61
HPS3-203ENST00000460822 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
HPS3-203ENST00000460822 USP17L3A6NCW0 530 aa5□□□□□ -1.61
HPS3-203ENST00000460822 USP17L4A6NCW7 530 aa5□□□□□ -1.61
HPS3-203ENST00000460822 TMEM229AB2RXF0 380 aa5□□□□□ -1.61
HPS3-203ENST00000460822 KCNA1Q09470 495 aa5□□□□□ -1.61
HPS3-203ENST00000460822 USP17L2Q6R6M4 530 aa5□□□□□ -1.61
HPS3-203ENST00000460822 USP17L1Q7RTZ2 530 aa5□□□□□ -1.61
HPS3-203ENST00000460822 BEND7Q8N7W2 519 aaPredicted RBP5□□□□□ -1.61
HPS3-203ENST00000460822 SERBP1Q8NC51 408 aaKnown RBP eCLIP5□□□□□ -1.61
HPS3-203ENST00000460822 C1orf216Q8TAB5 229 aa5□□□□□ -1.61
HPS3-203ENST00000460822 SLC4A9Q96Q91 983 aa5□□□□□ -1.61
HPS3-203ENST00000460822 CFHR5Q9BXR6 569 aa5□□□□□ -1.61
HPS3-203ENST00000460822 TFIP11Q9UBB9 837 aaKnown RBP5□□□□□ -1.61
HPS3-203ENST00000460822 CHMP3Q9Y3E7 222 aa5□□□□□ -1.61
HPS3-203ENST00000460822 GJA3Q9Y6H8 435 aa5□□□□□ -1.61
HPS3-203ENST00000460822 IGF1RP08069 1367 aa5□□□□□ -1.61
HPS3-203ENST00000460822 K7ELQ4 463 aaPredicted RBP5□□□□□ -1.61
HPS3-203ENST00000460822 GAS6Q14393 721 aa5□□□□□ -1.61
HPS3-203ENST00000460822 ARSJQ5FYB0 599 aaPredicted RBP5□□□□□ -1.61
HPS3-203ENST00000460822 FIGNL1Q6PIW4 674 aa5□□□□□ -1.61
HPS3-203ENST00000460822 DNAAF2Q9NVR5 837 aaKnown RBP5□□□□□ -1.61
HPS3-203ENST00000460822 ZNF358Q9NW07 568 aa5□□□□□ -1.61
HPS3-203ENST00000460822 MKRN1Q9UHC7 482 aaKnown RBP5□□□□□ -1.61
HPS3-203ENST00000460822 MAP2K3P46734 347 aa4.99□□□□□ -1.61
HPS3-203ENST00000460822 Q8N3U1 123 aa4.99□□□□□ -1.61
HPS3-203ENST00000460822 TPCN2Q8NHX9 752 aa4.99□□□□□ -1.61
HPS3-203ENST00000460822 NEUROD4Q9HD90 331 aa4.99□□□□□ -1.61
HPS3-203ENST00000460822 CNTNAP5Q8WYK1 1306 aa4.99□□□□□ -1.61
HPS3-203ENST00000460822 MTFR1Q15390 333 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 CDCA8Q53HL2 280 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 CCDC102BQ68D86 513 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 BICDL1Q6ZP65 573 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 ZNF428Q96B54 188 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 MAFBQ9Y5Q3 323 aaPredicted RBP4.98□□□□□ -1.61
HPS3-203ENST00000460822 LARP1Q6PKG0 1096 aaKnown RBP4.98□□□□□ -1.61
HPS3-203ENST00000460822 KRTAP1-3Q8IUG1 177 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 LARGE2Q8N3Y3 721 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 OGFOD1Q8N543 542 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 NEDD1Q8NHV4 660 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 CRISPLD1Q9H336 500 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 ZDHHC3Q9NYG2 299 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 ATXN7L1Q9ULK2 861 aaPredicted RBP4.98□□□□□ -1.61
HPS3-203ENST00000460822 ZNF232Q9UNY5 417 aa4.98□□□□□ -1.61
HPS3-203ENST00000460822 BCRP11274 1271 aa4.97□□□□□ -1.61
HPS3-203ENST00000460822 RBM25P49756 843 aaKnown RBP4.97□□□□□ -1.61
HPS3-203ENST00000460822 NLRP8Q86W28 1048 aa4.97□□□□□ -1.61
HPS3-203ENST00000460822 IVNS1ABPQ9Y6Y0 642 aa4.97□□□□□ -1.61
HPS3-203ENST00000460822 A0A1W2PNR3 127 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 TMEM88BA6NKF7 163 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 BMP4P12644 408 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 RASA1P20936 1047 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 SLC9A9Q8IVB4 645 aa4.96□□□□□ -1.61
HPS3-203ENST00000460822 TNS4Q8IZW8 715 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms