RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-205ENST00000460485 RPAP2Q8IXW5 612 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-205ENST00000460485 BCL11BQ9C0K0 894 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-205ENST00000460485 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
ERCC3-205ENST00000460485 ANKRD24Q8TF21 1146 aa17.67■□□□□ 0.42
ERCC3-205ENST00000460485 LTV1Q96GA3 475 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-205ENST00000460485 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
ERCC3-205ENST00000460485 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-205ENST00000460485 ERBB3P21860 1342 aa17.67■□□□□ 0.42
ERCC3-205ENST00000460485 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
ERCC3-205ENST00000460485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
ERCC3-205ENST00000460485 ZBTB7AO95365 584 aa17.65■□□□□ 0.42
ERCC3-205ENST00000460485 PROM2Q8N271 834 aa17.65■□□□□ 0.42
ERCC3-205ENST00000460485 IL17REQ8NFR9 667 aa17.65■□□□□ 0.42
ERCC3-205ENST00000460485 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
ERCC3-205ENST00000460485 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
ERCC3-205ENST00000460485 ATP10DQ9P241 1426 aa17.64■□□□□ 0.42
ERCC3-205ENST00000460485 HMMRO75330 724 aa17.64■□□□□ 0.41
ERCC3-205ENST00000460485 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
ERCC3-205ENST00000460485 NPM2Q86SE8 214 aaKnown RBP17.64■□□□□ 0.41
ERCC3-205ENST00000460485 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
ERCC3-205ENST00000460485 FHDC1Q9C0D6 1143 aaPredicted RBP17.64■□□□□ 0.41
ERCC3-205ENST00000460485 TEFQ10587 303 aa17.63■□□□□ 0.41
ERCC3-205ENST00000460485 ZNF530Q6P9A1 599 aaPredicted RBP17.63■□□□□ 0.41
ERCC3-205ENST00000460485 BCL9O00512 1426 aa17.63■□□□□ 0.41
ERCC3-205ENST00000460485 MRC1P22897 1456 aa17.63■□□□□ 0.41
ERCC3-205ENST00000460485 SKAP1Q86WV1 359 aa17.62■□□□□ 0.41
ERCC3-205ENST00000460485 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
ERCC3-205ENST00000460485 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
ERCC3-205ENST00000460485 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
ERCC3-205ENST00000460485 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
ERCC3-205ENST00000460485 GNAI3P08754 354 aa17.61■□□□□ 0.41
ERCC3-205ENST00000460485 BMP2KLQ5H9B9 411 aa17.61■□□□□ 0.41
ERCC3-205ENST00000460485 SGIP1Q9BQI5 828 aa17.61■□□□□ 0.41
ERCC3-205ENST00000460485 FLIIQ13045 1269 aa17.6■□□□□ 0.41
ERCC3-205ENST00000460485 SLC15A2Q16348 729 aa17.6■□□□□ 0.41
ERCC3-205ENST00000460485 DDB1Q16531 1140 aa17.6■□□□□ 0.41
ERCC3-205ENST00000460485 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
ERCC3-205ENST00000460485 IBTKQ9P2D0 1353 aaPredicted RBP17.6■□□□□ 0.41
ERCC3-205ENST00000460485 COL5A2P05997 1499 aaPredicted RBP17.59■□□□□ 0.41
ERCC3-205ENST00000460485 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
ERCC3-205ENST00000460485 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
ERCC3-205ENST00000460485 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
ERCC3-205ENST00000460485 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.41
ERCC3-205ENST00000460485 RNMTO43148 476 aaKnown RBP17.58■□□□□ 0.4
ERCC3-205ENST00000460485 BECN1Q14457 450 aa17.58■□□□□ 0.4
ERCC3-205ENST00000460485 KRT24Q2M2I5 525 aa17.58■□□□□ 0.4
ERCC3-205ENST00000460485 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
ERCC3-205ENST00000460485 ZBTB7CA1YPR0 619 aa17.57■□□□□ 0.4
ERCC3-205ENST00000460485 GIGYF1O75420 1035 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-205ENST00000460485 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
ERCC3-205ENST00000460485 TATP17735 454 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-205ENST00000460485 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
ERCC3-205ENST00000460485 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
ERCC3-205ENST00000460485 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
ERCC3-205ENST00000460485 HDAC5Q9UQL6 1122 aa17.57■□□□□ 0.4
ERCC3-205ENST00000460485 HEG1Q9ULI3 1381 aa17.56■□□□□ 0.4
ERCC3-205ENST00000460485 EIF4A1P60842 406 aaKnown RBP17.56■□□□□ 0.4
ERCC3-205ENST00000460485 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
ERCC3-205ENST00000460485 CEP350Q5VT06 3117 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 GNAI2P04899 355 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
ERCC3-205ENST00000460485 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 ARXQ96QS3 562 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
ERCC3-205ENST00000460485 ANKRD45Q5TZF3 282 aa17.54■□□□□ 0.4
ERCC3-205ENST00000460485 MARCH10Q8NA82 808 aaPredicted RBP17.54■□□□□ 0.4
ERCC3-205ENST00000460485 TBC1D32Q96NH3 1257 aa17.54■□□□□ 0.4
ERCC3-205ENST00000460485 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
ERCC3-205ENST00000460485 LNPKQ9C0E8 428 aa17.52■□□□□ 0.4
ERCC3-205ENST00000460485 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
ERCC3-205ENST00000460485 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
ERCC3-205ENST00000460485 GPR162Q16538 588 aa17.51■□□□□ 0.39
ERCC3-205ENST00000460485 TOM1L2Q6ZVM7 507 aa17.51■□□□□ 0.39
ERCC3-205ENST00000460485 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
ERCC3-205ENST00000460485 C1orf115Q9H7X2 142 aa17.51■□□□□ 0.39
ERCC3-205ENST00000460485 MEGF6O75095 1541 aa17.51■□□□□ 0.39
ERCC3-205ENST00000460485 TUBGCP6Q96RT7 1819 aa17.5■□□□□ 0.39
ERCC3-205ENST00000460485 G2E3Q7L622 706 aa17.5■□□□□ 0.39
ERCC3-205ENST00000460485 MEIS3Q99687 375 aa17.5■□□□□ 0.39
ERCC3-205ENST00000460485 NLRP2Q9NX02 1062 aa17.5■□□□□ 0.39
ERCC3-205ENST00000460485 C5P01031 1676 aa17.49■□□□□ 0.39
ERCC3-205ENST00000460485 UBR2Q8IWV8 1755 aa17.49■□□□□ 0.39
ERCC3-205ENST00000460485 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
ERCC3-205ENST00000460485 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
ERCC3-205ENST00000460485 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
ERCC3-205ENST00000460485 CSB-PGBD3P0DP91 1061 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 SRCIN1Q9C0H9 1055 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 HYPKQ9NX55 129 aa17.48■□□□□ 0.39
ERCC3-205ENST00000460485 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
ERCC3-205ENST00000460485 EXOC5O00471 708 aa17.47■□□□□ 0.39
ERCC3-205ENST00000460485 PHKG2P15735 406 aa17.47■□□□□ 0.39
ERCC3-205ENST00000460485 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
ERCC3-205ENST00000460485 CDC45O75419 566 aa17.46■□□□□ 0.39
ERCC3-205ENST00000460485 ALDH1L1O75891 902 aa17.46■□□□□ 0.39
ERCC3-205ENST00000460485 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms