RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
SCMH1-212ENST00000460215 IQCA1LA6NCM1 817 aa11.99□□□□□ -0.49
SCMH1-212ENST00000460215 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
SCMH1-212ENST00000460215 PHKG2P15735 406 aa11.99□□□□□ -0.49
SCMH1-212ENST00000460215 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
SCMH1-212ENST00000460215 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
SCMH1-212ENST00000460215 MYH14Q7Z406 1995 aaKnown RBP11.98□□□□□ -0.49
SCMH1-212ENST00000460215 DLEC1Q9Y238 1755 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 NCAPD2Q15021 1401 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 TM4SF1P30408 202 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 MCOLN1Q9GZU1 580 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
SCMH1-212ENST00000460215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCMH1-212ENST00000460215 ABT1Q9ULW3 272 aaKnown RBP11.98□□□□□ -0.49
SCMH1-212ENST00000460215 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
SCMH1-212ENST00000460215 EAPPQ56P03 285 aaPredicted RBP11.97□□□□□ -0.49
SCMH1-212ENST00000460215 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
SCMH1-212ENST00000460215 H0YIN7 160 aa11.96□□□□□ -0.49
SCMH1-212ENST00000460215 ZPR1O75312 459 aa11.96□□□□□ -0.49
SCMH1-212ENST00000460215 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.49
SCMH1-212ENST00000460215 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
SCMH1-212ENST00000460215 PUS7Q96PZ0 661 aaKnown RBP11.96□□□□□ -0.49
SCMH1-212ENST00000460215 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
SCMH1-212ENST00000460215 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
SCMH1-212ENST00000460215 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
SCMH1-212ENST00000460215 C21orf2O43822 256 aa11.95□□□□□ -0.5
SCMH1-212ENST00000460215 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
SCMH1-212ENST00000460215 GRM1Q13255 1194 aa11.95□□□□□ -0.5
SCMH1-212ENST00000460215 NFIXQ14938 502 aa11.95□□□□□ -0.5
SCMH1-212ENST00000460215 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
SCMH1-212ENST00000460215 TAOK3Q9H2K8 898 aa11.95□□□□□ -0.5
SCMH1-212ENST00000460215 THSD7BQ9C0I4 1608 aa11.95□□□□□ -0.5
SCMH1-212ENST00000460215 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
SCMH1-212ENST00000460215 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
SCMH1-212ENST00000460215 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
SCMH1-212ENST00000460215 FYB1O15117 783 aa11.94□□□□□ -0.5
SCMH1-212ENST00000460215 PRPF38BQ5VTL8 546 aaKnown RBP11.94□□□□□ -0.5
SCMH1-212ENST00000460215 CAPNS2Q96L46 248 aa11.94□□□□□ -0.5
SCMH1-212ENST00000460215 LTBP3Q9NS15 1303 aa11.93□□□□□ -0.5
SCMH1-212ENST00000460215 SERPINB2P05120 415 aa11.93□□□□□ -0.5
SCMH1-212ENST00000460215 ZNF622Q969S3 477 aaKnown RBP eCLIP11.93□□□□□ -0.5
SCMH1-212ENST00000460215 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
SCMH1-212ENST00000460215 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
SCMH1-212ENST00000460215 EMILIN1Q9Y6C2 1016 aa11.93□□□□□ -0.5
SCMH1-212ENST00000460215 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
SCMH1-212ENST00000460215 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 ADAMTS7Q9UKP4 1686 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
SCMH1-212ENST00000460215 ECE1P42892 770 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 DGKZQ13574 1117 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 MAP1SQ66K74 1059 aaPredicted RBP11.92□□□□□ -0.5
SCMH1-212ENST00000460215 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
SCMH1-212ENST00000460215 EYA1Q99502 592 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 HACL1Q9UJ83 578 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 SCN4AP35499 1836 aa11.92□□□□□ -0.5
SCMH1-212ENST00000460215 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
SCMH1-212ENST00000460215 EPHX2P34913 555 aa11.91□□□□□ -0.5
SCMH1-212ENST00000460215 CABP4P57796 275 aa11.91□□□□□ -0.5
SCMH1-212ENST00000460215 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
SCMH1-212ENST00000460215 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
SCMH1-212ENST00000460215 FER1L6Q2WGJ9 1857 aa11.91□□□□□ -0.5
SCMH1-212ENST00000460215 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
SCMH1-212ENST00000460215 HSP90AB1P08238 724 aaKnown RBP11.9□□□□□ -0.5
SCMH1-212ENST00000460215 SOX10P56693 466 aa11.9□□□□□ -0.5
SCMH1-212ENST00000460215 SOS1Q07889 1333 aaPredicted RBP11.89□□□□□ -0.51
SCMH1-212ENST00000460215 TJP1Q07157 1748 aa11.89□□□□□ -0.51
SCMH1-212ENST00000460215 CA12O43570 354 aa11.89□□□□□ -0.51
SCMH1-212ENST00000460215 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
SCMH1-212ENST00000460215 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
SCMH1-212ENST00000460215 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
SCMH1-212ENST00000460215 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
SCMH1-212ENST00000460215 AOC2O75106 756 aa11.88□□□□□ -0.51
SCMH1-212ENST00000460215 COL15A1P39059 1388 aa11.88□□□□□ -0.51
SCMH1-212ENST00000460215 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
SCMH1-212ENST00000460215 PDE6BP35913 854 aa11.87□□□□□ -0.51
SCMH1-212ENST00000460215 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
SCMH1-212ENST00000460215 BCL2L12Q9HB09 334 aa11.87□□□□□ -0.51
SCMH1-212ENST00000460215 PDZRN3Q9UPQ7 1066 aa11.87□□□□□ -0.51
SCMH1-212ENST00000460215 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
SCMH1-212ENST00000460215 MAP2K2P36507 400 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 SOGA3Q5TF21 947 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
SCMH1-212ENST00000460215 DNAJC10Q8IXB1 793 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 CASP8AP2Q9UKL3 1982 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 KIF20BQ96Q89 1820 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
SCMH1-212ENST00000460215 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
SCMH1-212ENST00000460215 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
SCMH1-212ENST00000460215 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
SCMH1-212ENST00000460215 CNKSR1Q969H4 720 aa11.85□□□□□ -0.51
SCMH1-212ENST00000460215 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
SCMH1-212ENST00000460215 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
SCMH1-212ENST00000460215 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
SCMH1-212ENST00000460215 NFATC2IPQ8NCF5 419 aa11.84□□□□□ -0.51
SCMH1-212ENST00000460215 TESK2Q96S53 571 aa11.84□□□□□ -0.51
SCMH1-212ENST00000460215 TLL2Q9Y6L7 1015 aa11.84□□□□□ -0.51
SCMH1-212ENST00000460215 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
SCMH1-212ENST00000460215 MTHFSP49914 203 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms