RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
SDF4-204ENST00000459994 SOS1Q07889 1333 aaPredicted RBP20.7■□□□□ 0.9
SDF4-204ENST00000459994 NLGN1Q8N2Q7 840 aa20.69■□□□□ 0.9
SDF4-204ENST00000459994 NRXN2Q9P2S2 1712 aa20.68■□□□□ 0.9
SDF4-204ENST00000459994 DDR1Q08345 913 aa20.68■□□□□ 0.9
SDF4-204ENST00000459994 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
SDF4-204ENST00000459994 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
SDF4-204ENST00000459994 TEFQ10587 303 aa20.67■□□□□ 0.9
SDF4-204ENST00000459994 COL15A1P39059 1388 aa20.67■□□□□ 0.9
SDF4-204ENST00000459994 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
SDF4-204ENST00000459994 DCTN1Q14203 1278 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 MCM10Q7L590 875 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 HEG1Q9ULI3 1381 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 ARFGEF1Q9Y6D6 1849 aa20.66■□□□□ 0.9
SDF4-204ENST00000459994 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
SDF4-204ENST00000459994 BCORQ6W2J9 1755 aa20.64■□□□□ 0.9
SDF4-204ENST00000459994 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.9
SDF4-204ENST00000459994 A0A0G2JLW4 131 aa20.64■□□□□ 0.89
SDF4-204ENST00000459994 GRIN3BO60391 1043 aa20.64■□□□□ 0.89
SDF4-204ENST00000459994 FCHSD2O94868 740 aa20.64■□□□□ 0.89
SDF4-204ENST00000459994 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.89
SDF4-204ENST00000459994 PNISRQ8TF01 805 aaKnown RBP20.64■□□□□ 0.89
SDF4-204ENST00000459994 BCL2L12Q9HB09 334 aa20.64■□□□□ 0.89
SDF4-204ENST00000459994 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
SDF4-204ENST00000459994 PARP3Q9Y6F1 533 aa20.63■□□□□ 0.89
SDF4-204ENST00000459994 ANKRD31Q8N7Z5 1873 aa20.62■□□□□ 0.89
SDF4-204ENST00000459994 DLEC1Q9Y238 1755 aa20.62■□□□□ 0.89
SDF4-204ENST00000459994 PRAMEF22A3QJZ6 481 aa20.62■□□□□ 0.89
SDF4-204ENST00000459994 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
SDF4-204ENST00000459994 DPEP1P16444 411 aa20.62■□□□□ 0.89
SDF4-204ENST00000459994 TM4SF1P30408 202 aa20.62■□□□□ 0.89
SDF4-204ENST00000459994 BTBD11A6QL63 1104 aa20.61■□□□□ 0.89
SDF4-204ENST00000459994 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
SDF4-204ENST00000459994 KCNA3P22001 575 aa20.6■□□□□ 0.89
SDF4-204ENST00000459994 PLEKHF1Q96S99 279 aa20.6■□□□□ 0.89
SDF4-204ENST00000459994 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
SDF4-204ENST00000459994 ZPR1O75312 459 aa20.59■□□□□ 0.89
SDF4-204ENST00000459994 A1BGP04217 495 aa20.59■□□□□ 0.89
SDF4-204ENST00000459994 PIP4K2AP48426 406 aaPredicted RBP20.59■□□□□ 0.89
SDF4-204ENST00000459994 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
SDF4-204ENST00000459994 TGFB2P61812 414 aa20.59■□□□□ 0.89
SDF4-204ENST00000459994 NFIXQ14938 502 aa20.58■□□□□ 0.89
SDF4-204ENST00000459994 WDR43Q15061 677 aaKnown RBP eCLIP20.58■□□□□ 0.89
SDF4-204ENST00000459994 FMNL2Q96PY5 1086 aa20.58■□□□□ 0.89
SDF4-204ENST00000459994 USP16Q9Y5T5 823 aa20.58■□□□□ 0.89
SDF4-204ENST00000459994 ADCY9O60503 1353 aa20.58■□□□□ 0.88
SDF4-204ENST00000459994 SBF1O95248 1867 aa20.57■□□□□ 0.88
SDF4-204ENST00000459994 CACNA1SQ13698 1873 aa20.57■□□□□ 0.88
SDF4-204ENST00000459994 ATP10DQ9P241 1426 aa20.57■□□□□ 0.88
SDF4-204ENST00000459994 COL11A2P13942 1736 aaPredicted RBP20.56■□□□□ 0.88
SDF4-204ENST00000459994 STARD3NLO95772 234 aa20.56■□□□□ 0.88
SDF4-204ENST00000459994 CHRNA5P30532 468 aa20.56■□□□□ 0.88
SDF4-204ENST00000459994 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
SDF4-204ENST00000459994 MIS18AQ9NYP9 233 aa20.56■□□□□ 0.88
SDF4-204ENST00000459994 BCS1LQ9Y276 419 aa20.56■□□□□ 0.88
SDF4-204ENST00000459994 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
SDF4-204ENST00000459994 THUMPD2Q9BTF0 503 aaKnown RBP20.55■□□□□ 0.88
SDF4-204ENST00000459994 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
SDF4-204ENST00000459994 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
SDF4-204ENST00000459994 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
SDF4-204ENST00000459994 TBC1D2BQ9UPU7 963 aa20.54■□□□□ 0.88
SDF4-204ENST00000459994 BICDL1Q6ZP65 573 aa20.53■□□□□ 0.88
SDF4-204ENST00000459994 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
SDF4-204ENST00000459994 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
SDF4-204ENST00000459994 TBC1D9BQ66K14 1250 aa20.52■□□□□ 0.88
SDF4-204ENST00000459994 TEX13AQ9BXU3 409 aaPredicted RBP20.52■□□□□ 0.88
SDF4-204ENST00000459994 SERPINB2P05120 415 aa20.51■□□□□ 0.87
SDF4-204ENST00000459994 NFE2L2Q16236 605 aa20.51■□□□□ 0.87
SDF4-204ENST00000459994 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
SDF4-204ENST00000459994 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
SDF4-204ENST00000459994 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
SDF4-204ENST00000459994 NUP98P52948 1817 aa20.49■□□□□ 0.87
SDF4-204ENST00000459994 NBPF26B4DH59 902 aa20.49■□□□□ 0.87
SDF4-204ENST00000459994 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
SDF4-204ENST00000459994 TAF7Q15545 349 aaPredicted RBP20.49■□□□□ 0.87
SDF4-204ENST00000459994 NBPF10Q6P3W6 841 aaKnown RBP20.49■□□□□ 0.87
SDF4-204ENST00000459994 CCDC24Q8N4L8 307 aa20.49■□□□□ 0.87
SDF4-204ENST00000459994 NBPF15Q8N660 670 aa20.49■□□□□ 0.87
SDF4-204ENST00000459994 A0A087WZG4 1122 aa20.48■□□□□ 0.87
SDF4-204ENST00000459994 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
SDF4-204ENST00000459994 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
SDF4-204ENST00000459994 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
SDF4-204ENST00000459994 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
SDF4-204ENST00000459994 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
SDF4-204ENST00000459994 GIGYF1O75420 1035 aaPredicted RBP20.45■□□□□ 0.86
SDF4-204ENST00000459994 MAPK8IP3Q9UPT6 1336 aa20.45■□□□□ 0.86
SDF4-204ENST00000459994 ARFGEF2Q9Y6D5 1785 aa20.44■□□□□ 0.86
SDF4-204ENST00000459994 NEFMP07197 916 aa20.44■□□□□ 0.86
SDF4-204ENST00000459994 DALRD3Q5D0E6 543 aaKnown RBP20.44■□□□□ 0.86
SDF4-204ENST00000459994 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
SDF4-204ENST00000459994 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
SDF4-204ENST00000459994 SLX4Q8IY92 1834 aa20.43■□□□□ 0.86
SDF4-204ENST00000459994 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
SDF4-204ENST00000459994 PRR5LQ6MZQ0 368 aa20.43■□□□□ 0.86
SDF4-204ENST00000459994 FER1L6Q2WGJ9 1857 aa20.42■□□□□ 0.86
SDF4-204ENST00000459994 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
SDF4-204ENST00000459994 TIAM2Q8IVF5 1701 aa20.41■□□□□ 0.86
SDF4-204ENST00000459994 RIPK4P57078 832 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms