RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 CUEDC1Q9NWM3 386 aaPredicted RBP6.61□□□□□ -1.35
SPARCL1-204ENST00000458304 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
SPARCL1-204ENST00000458304 ZMIZ1Q9ULJ6 1067 aa6.61□□□□□ -1.35
SPARCL1-204ENST00000458304 SUGT1Q9Y2Z0 365 aa6.61□□□□□ -1.35
SPARCL1-204ENST00000458304 GPR37L1O60883 481 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 INTS6LQ5JSJ4 861 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 PNMA1Q8ND90 353 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 DNAJC2Q99543 621 aaKnown RBP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 PCGF6Q9BYE7 350 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 EMILIN1Q9Y6C2 1016 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 GRIN2AQ12879 1464 aa6.6□□□□□ -1.35
SPARCL1-204ENST00000458304 SBNO2Q9Y2G9 1366 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 ATP9BO43861 1147 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 WFS1O76024 890 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 SERPINB4P48594 390 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 TBC1D9Q6ZT07 1266 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 LNPKQ9C0E8 428 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 KIAA0586Q9BVV6 1533 aa6.59□□□□□ -1.35
SPARCL1-204ENST00000458304 FYCO1Q9BQS8 1478 aa6.59□□□□□ -1.36
SPARCL1-204ENST00000458304 TERTO14746 1132 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 ZEB1P37275 1124 aaPredicted RBP6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 SCARF1Q14162 830 aa6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 KANK4Q5T7N3 995 aaPredicted RBP6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 PIK3R5Q8WYR1 880 aa6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 NOVA2Q9UNW9 492 aaKnown RBP6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 MAP3K1Q13233 1512 aa6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 ZNF608Q9ULD9 1512 aaPredicted RBP6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 CCDC18Q5T9S5 1454 aa6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 ARHGAP35Q9NRY4 1499 aa6.58□□□□□ -1.36
SPARCL1-204ENST00000458304 ESPNB1AK53 854 aa6.57□□□□□ -1.36
SPARCL1-204ENST00000458304 SEMA3FQ13275 785 aa6.57□□□□□ -1.36
SPARCL1-204ENST00000458304 Q6ZVU0 165 aa6.57□□□□□ -1.36
SPARCL1-204ENST00000458304 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
SPARCL1-204ENST00000458304 HECW1Q76N89 1606 aa6.57□□□□□ -1.36
SPARCL1-204ENST00000458304 ARAP1Q96P48 1450 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 NEFLP07196 543 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 FBXO45P0C2W1 286 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 IGBP1P78318 339 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 IRX6P78412 446 aaPredicted RBP6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 TAGLNQ01995 201 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 DHX9Q08211 1270 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 CBLBQ13191 982 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 LARGE2Q8N3Y3 721 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 GPATCH3Q96I76 525 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 SLC52A1Q9NWF4 448 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 NXF1Q9UBU9 619 aaKnown RBP6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 SAMD9Q5K651 1589 aa6.56□□□□□ -1.36
SPARCL1-204ENST00000458304 UGGT2Q9NYU1 1516 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 ZBBXA8MT70 800 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 HDLBPQ00341 1268 aaKnown RBP6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 NBPF20Q3BBV1 942 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 C6orf118Q5T5N4 469 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 EGFLAMQ63HQ2 1017 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 SDE2Q6IQ49 451 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 DZIP3Q86Y13 1208 aaKnown RBP6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 BACH2Q9BYV9 841 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 CASKIN1Q8WXD9 1431 aa6.55□□□□□ -1.36
SPARCL1-204ENST00000458304 SOS2Q07890 1332 aaPredicted RBP6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 BMP2P12643 396 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 PTPROQ16827 1216 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 CCDC144BQ3MJ40 725 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 KCNB2Q92953 911 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 CLP1Q92989 425 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 TSEN34Q9BSV6 310 aaKnown RBP6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 KLHL42Q9P2K6 505 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 MTUS2Q5JR59 1369 aa6.54□□□□□ -1.36
SPARCL1-204ENST00000458304 FHOD3Q2V2M9 1422 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 CFAP43Q8NDM7 1665 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 WIPF1O43516 503 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 LILRA1O75019 489 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 IBSPP21815 317 aaPredicted RBP6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 NR1H3Q13133 447 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 ARMC5Q96C12 935 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 TMPRSS4Q9NRS4 437 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 SLAIN2Q9P270 581 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 MAGEC2Q9UBF1 373 aaPredicted RBP6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 PRKAG2Q9UGJ0 569 aa6.53□□□□□ -1.36
SPARCL1-204ENST00000458304 TIAM1Q13009 1591 aa6.52□□□□□ -1.36
SPARCL1-204ENST00000458304 KIAA0556O60303 1618 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 H3BM21 787 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 SPINT1O43278 529 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 UPP2O95045 317 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 ATP2B1P20020 1258 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 ATP2B4P23634 1241 aa6.52□□□□□ -1.37
SPARCL1-204ENST00000458304 MCCD1P59942 119 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms