RNA–Protein interactions for RNA: ENST00000458283.5

PCCA-208, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-208ENST00000458283 BTBD11A6QL63 1104 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 ELL2O00472 640 aaPredicted RBP13.29□□□□□ -0.28
PCCA-208ENST00000458283 KCNQ3O43525 872 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 POLD1P28340 1107 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
PCCA-208ENST00000458283 CHL1O00533 1208 aa13.28□□□□□ -0.28
PCCA-208ENST00000458283 NKX1-1Q15270 411 aaPredicted RBP13.28□□□□□ -0.28
PCCA-208ENST00000458283 TRMT2AQ8IZ69 625 aaKnown RBP13.28□□□□□ -0.28
PCCA-208ENST00000458283 ZNF784Q8NCA9 323 aaPredicted RBP13.28□□□□□ -0.28
PCCA-208ENST00000458283 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
PCCA-208ENST00000458283 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.28
PCCA-208ENST00000458283 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
PCCA-208ENST00000458283 GPR162Q16538 588 aa13.27□□□□□ -0.29
PCCA-208ENST00000458283 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
PCCA-208ENST00000458283 ERVV-2B6SEH9 535 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 C5P01031 1676 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 KCNQ4P56696 695 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 PNPLA7Q6ZV29 1317 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 PELP1Q8IZL8 1130 aaKnown RBP13.26□□□□□ -0.29
PCCA-208ENST00000458283 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 TSPYL6Q8N831 410 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 SLC16A10Q8TF71 515 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 BCL2L13Q9BXK5 485 aa13.26□□□□□ -0.29
PCCA-208ENST00000458283 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
PCCA-208ENST00000458283 C8orf58Q8NAV2 365 aa13.25□□□□□ -0.29
PCCA-208ENST00000458283 CCNL1Q9UK58 526 aaPredicted RBP13.25□□□□□ -0.29
PCCA-208ENST00000458283 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
PCCA-208ENST00000458283 TWISTNBQ3B726 338 aaPredicted RBP13.24□□□□□ -0.29
PCCA-208ENST00000458283 PIGBQ92521 554 aa13.24□□□□□ -0.29
PCCA-208ENST00000458283 NECTIN2Q92692 538 aa13.24□□□□□ -0.29
PCCA-208ENST00000458283 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
PCCA-208ENST00000458283 UBR2Q8IWV8 1755 aa13.23□□□□□ -0.29
PCCA-208ENST00000458283 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
PCCA-208ENST00000458283 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
PCCA-208ENST00000458283 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
PCCA-208ENST00000458283 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
PCCA-208ENST00000458283 PTCD1O75127 700 aaKnown RBP13.22□□□□□ -0.29
PCCA-208ENST00000458283 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
PCCA-208ENST00000458283 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
PCCA-208ENST00000458283 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
PCCA-208ENST00000458283 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
PCCA-208ENST00000458283 LAMB4A4D0S4 1761 aa13.22□□□□□ -0.29
PCCA-208ENST00000458283 PRAMEF22A3QJZ6 481 aa13.21□□□□□ -0.29
PCCA-208ENST00000458283 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
PCCA-208ENST00000458283 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
PCCA-208ENST00000458283 BCAR3O75815 825 aa13.2□□□□□ -0.3
PCCA-208ENST00000458283 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
PCCA-208ENST00000458283 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
PCCA-208ENST00000458283 IRX6P78412 446 aaPredicted RBP13.2□□□□□ -0.3
PCCA-208ENST00000458283 POLA2Q14181 598 aa13.2□□□□□ -0.3
PCCA-208ENST00000458283 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
PCCA-208ENST00000458283 PALLDQ8WX93 1383 aa13.2□□□□□ -0.3
PCCA-208ENST00000458283 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
PCCA-208ENST00000458283 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
PCCA-208ENST00000458283 NLGN2Q8NFZ4 835 aa13.19□□□□□ -0.3
PCCA-208ENST00000458283 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
PCCA-208ENST00000458283 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
PCCA-208ENST00000458283 HEG1Q9ULI3 1381 aa13.19□□□□□ -0.3
PCCA-208ENST00000458283 PLIN1O60240 522 aa13.18□□□□□ -0.3
PCCA-208ENST00000458283 VAMP4O75379 141 aa13.18□□□□□ -0.3
PCCA-208ENST00000458283 CT47B1P0C2W7 299 aaPredicted RBP13.18□□□□□ -0.3
PCCA-208ENST00000458283 HMGB2P26583 209 aaKnown RBP13.18□□□□□ -0.3
PCCA-208ENST00000458283 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
PCCA-208ENST00000458283 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
PCCA-208ENST00000458283 C4BP0C0L5 1744 aa13.18□□□□□ -0.3
PCCA-208ENST00000458283 TJP1Q07157 1748 aa13.18□□□□□ -0.3
PCCA-208ENST00000458283 RRP1P56182 461 aaKnown RBP13.17□□□□□ -0.3
PCCA-208ENST00000458283 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
PCCA-208ENST00000458283 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
PCCA-208ENST00000458283 ANXA1P04083 346 aa13.16□□□□□ -0.3
PCCA-208ENST00000458283 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
PCCA-208ENST00000458283 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
PCCA-208ENST00000458283 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
PCCA-208ENST00000458283 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
PCCA-208ENST00000458283 NEFLP07196 543 aa13.15□□□□□ -0.3
PCCA-208ENST00000458283 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
PCCA-208ENST00000458283 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
PCCA-208ENST00000458283 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
PCCA-208ENST00000458283 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 HOXB7P09629 217 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 MRPL50Q8N5N7 158 aaKnown RBP13.14□□□□□ -0.31
PCCA-208ENST00000458283 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
PCCA-208ENST00000458283 AK7Q96M32 723 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 TNNQ9UQP3 1299 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
PCCA-208ENST00000458283 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
PCCA-208ENST00000458283 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
PCCA-208ENST00000458283 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
PCCA-208ENST00000458283 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
PCCA-208ENST00000458283 SLC4A9Q96Q91 983 aa13.13□□□□□ -0.31
PCCA-208ENST00000458283 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
PCCA-208ENST00000458283 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
PCCA-208ENST00000458283 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
PCCA-208ENST00000458283 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
PCCA-208ENST00000458283 PHF14O94880 888 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms