RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 EXOC6BQ9Y2D4 811 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 SLIT3O75094 1523 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 CAMTA1Q9Y6Y1 1673 aa13.37□□□□□ -0.27
RFX3-211ENST00000458034 LMTK3Q96Q04 1460 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
RFX3-211ENST00000458034 SSFA2P28290 1259 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 PSME1Q06323 249 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 AKAP4Q5JQC9 854 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 ESYT1Q9BSJ8 1104 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 GRPEL1Q9HAV7 217 aa13.36□□□□□ -0.27
RFX3-211ENST00000458034 LRRFIP2Q9Y608 721 aaKnown RBP13.36□□□□□ -0.27
RFX3-211ENST00000458034 BAG4O95429 457 aaKnown RBP13.35□□□□□ -0.27
RFX3-211ENST00000458034 TEFQ10587 303 aa13.35□□□□□ -0.27
RFX3-211ENST00000458034 SSH3Q8TE77 659 aa13.35□□□□□ -0.27
RFX3-211ENST00000458034 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
RFX3-211ENST00000458034 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
RFX3-211ENST00000458034 KLHL40Q2TBA0 621 aa13.34□□□□□ -0.27
RFX3-211ENST00000458034 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
RFX3-211ENST00000458034 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
RFX3-211ENST00000458034 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
RFX3-211ENST00000458034 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
RFX3-211ENST00000458034 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
RFX3-211ENST00000458034 USP44Q9H0E7 712 aa13.33□□□□□ -0.28
RFX3-211ENST00000458034 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 CYP2E1P05181 493 aaPredicted RBP13.32□□□□□ -0.28
RFX3-211ENST00000458034 CHMLP26374 656 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 ESCO1Q5FWF5 840 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
RFX3-211ENST00000458034 DNAAF4Q8WXU2 420 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
RFX3-211ENST00000458034 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
RFX3-211ENST00000458034 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
RFX3-211ENST00000458034 NPHP4O75161 1426 aaPredicted RBP13.31□□□□□ -0.28
RFX3-211ENST00000458034 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
RFX3-211ENST00000458034 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
RFX3-211ENST00000458034 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
RFX3-211ENST00000458034 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
RFX3-211ENST00000458034 ARXQ96QS3 562 aa13.31□□□□□ -0.28
RFX3-211ENST00000458034 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 SURF6O75683 361 aaKnown RBP13.3□□□□□ -0.28
RFX3-211ENST00000458034 ALDH1L1O75891 902 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 EIF2S2P20042 333 aaKnown RBP13.3□□□□□ -0.28
RFX3-211ENST00000458034 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
RFX3-211ENST00000458034 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 CNTROBQ8N137 903 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 ADAMTS7Q9UKP4 1686 aa13.3□□□□□ -0.28
RFX3-211ENST00000458034 ZBTB7CA1YPR0 619 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 RNMTO43148 476 aaKnown RBP13.29□□□□□ -0.28
RFX3-211ENST00000458034 NEK4P51957 841 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 MCTP1Q6DN14 999 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 ERC1Q8IUD2 1116 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 INTS4Q96HW7 963 aaKnown RBP13.29□□□□□ -0.28
RFX3-211ENST00000458034 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
RFX3-211ENST00000458034 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
RFX3-211ENST00000458034 DBF4Q9UBU7 674 aaPredicted RBP13.29□□□□□ -0.28
RFX3-211ENST00000458034 SRGAP3O43295 1099 aa13.28□□□□□ -0.28
RFX3-211ENST00000458034 CUL4AQ13619 759 aa13.28□□□□□ -0.28
RFX3-211ENST00000458034 BEND3Q5T5X7 828 aa13.28□□□□□ -0.28
RFX3-211ENST00000458034 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
RFX3-211ENST00000458034 TRIM44Q96DX7 344 aaPredicted RBP13.28□□□□□ -0.28
RFX3-211ENST00000458034 TTC41PQ6P2S7 1318 aa13.28□□□□□ -0.28
RFX3-211ENST00000458034 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
RFX3-211ENST00000458034 DDX58O95786 925 aaKnown RBP13.27□□□□□ -0.29
RFX3-211ENST00000458034 ZNF445P59923 1031 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 RUFY2Q8WXA3 655 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 TMX3Q96JJ7 454 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 LGR6Q9HBX8 967 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 MST1RQ04912 1400 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 ABCC6O95255 1503 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.29
RFX3-211ENST00000458034 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 GCP02774 474 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 CCDC173Q0VFZ6 552 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
RFX3-211ENST00000458034 MTX1Q13505 466 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 PLEKHG2Q9H7P9 1386 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 LMBRD1Q9NUN5 540 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 HYPKQ9NX55 129 aa13.26□□□□□ -0.29
RFX3-211ENST00000458034 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 ADCY9O60503 1353 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
RFX3-211ENST00000458034 MBD3O95983 291 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 KSR2Q6VAB6 950 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 KIAA1211Q6ZU35 1233 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
RFX3-211ENST00000458034 ZGPATQ8N5A5 531 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms