RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 COL15A1P39059 1388 aa33.88■■■■□ 3.01
CAPN7-205ENST00000457023 KIF3CO14782 793 aa33.87■■■■□ 3.01
CAPN7-205ENST00000457023 TTC5Q8N0Z6 440 aa33.87■■■■□ 3.01
CAPN7-205ENST00000457023 BCL2L12Q9HB09 334 aa33.87■■■■□ 3.01
CAPN7-205ENST00000457023 VIRMAQ69YN4 1812 aaKnown RBP33.87■■■■□ 3.01
CAPN7-205ENST00000457023 BRCA1P38398 1863 aaKnown RBP33.86■■■■□ 3.01
CAPN7-205ENST00000457023 NFIXQ14938 502 aa33.86■■■■□ 3.01
CAPN7-205ENST00000457023 DALRD3Q5D0E6 543 aaKnown RBP33.86■■■■□ 3.01
CAPN7-205ENST00000457023 ZNF790Q6PG37 636 aa33.86■■■■□ 3.01
CAPN7-205ENST00000457023 STARD3NLO95772 234 aa33.85■■■■□ 3.01
CAPN7-205ENST00000457023 TEFQ10587 303 aa33.85■■■■□ 3.01
CAPN7-205ENST00000457023 UBR2Q8IWV8 1755 aa33.85■■■■□ 3.01
CAPN7-205ENST00000457023 CHRNA5P30532 468 aa33.84■■■■□ 3.01
CAPN7-205ENST00000457023 ZNF496Q96IT1 587 aaPredicted RBP33.84■■■■□ 3.01
CAPN7-205ENST00000457023 PHACTR3Q96KR7 559 aa33.84■■■■□ 3.01
CAPN7-205ENST00000457023 CFAP53Q96M91 514 aa33.84■■■■□ 3.01
CAPN7-205ENST00000457023 CANXP27824 592 aaKnown RBP33.83■■■■□ 3.01
CAPN7-205ENST00000457023 EIF5P55010 431 aaKnown RBP33.83■■■■□ 3.01
CAPN7-205ENST00000457023 TEX13AQ9BXU3 409 aaPredicted RBP33.83■■■■□ 3.01
CAPN7-205ENST00000457023 RSPH6AQ9H0K4 717 aa33.82■■■■□ 3
CAPN7-205ENST00000457023 CEMIPQ8WUJ3 1361 aa33.82■■■■□ 3
CAPN7-205ENST00000457023 HEG1Q9ULI3 1381 aa33.81■■■■□ 3
CAPN7-205ENST00000457023 PRKAR2BP31323 418 aa33.8■■■■□ 3
CAPN7-205ENST00000457023 SERPINB2P05120 415 aa33.79■■■■□ 3
CAPN7-205ENST00000457023 HSPA6P17066 643 aa33.79■■■■□ 3
CAPN7-205ENST00000457023 A0A087WZG4 1122 aa33.78■■■■□ 3
CAPN7-205ENST00000457023 NUDCQ9Y266 331 aa33.78■■■■□ 3
CAPN7-205ENST00000457023 ARFGEF1Q9Y6D6 1849 aa33.77■■■■□ 3
CAPN7-205ENST00000457023 PPP2R1AP30153 589 aa33.77■■■■□ 3
CAPN7-205ENST00000457023 C9orf131Q5VYM1 1079 aa33.77■■■■□ 3
CAPN7-205ENST00000457023 FMNL2Q96PY5 1086 aa33.75■■■□□ 2.99
CAPN7-205ENST00000457023 NRXN2Q9P2S2 1712 aa33.75■■■□□ 2.99
CAPN7-205ENST00000457023 SIPA1L3O60292 1781 aaPredicted RBP33.74■■■□□ 2.99
CAPN7-205ENST00000457023 BTBD11A6QL63 1104 aa33.72■■■□□ 2.99
CAPN7-205ENST00000457023 IL6STP40189 918 aaPredicted RBP33.72■■■□□ 2.99
CAPN7-205ENST00000457023 KCNQ3O43525 872 aa33.71■■■□□ 2.99
CAPN7-205ENST00000457023 TOMM70O94826 608 aa33.7■■■□□ 2.99
CAPN7-205ENST00000457023 U2AF1L5P0DN76 240 aaPredicted RBP33.7■■■□□ 2.99
CAPN7-205ENST00000457023 U2AF1Q01081 240 aaKnown RBP eCLIP33.7■■■□□ 2.99
CAPN7-205ENST00000457023 AFDNP55196 1824 aaKnown RBP33.69■■■□□ 2.98
CAPN7-205ENST00000457023 A1BGP04217 495 aa33.69■■■□□ 2.98
CAPN7-205ENST00000457023 NMRK2Q9NPI5 230 aa33.69■■■□□ 2.98
CAPN7-205ENST00000457023 TBC1D9BQ66K14 1250 aa33.68■■■□□ 2.98
CAPN7-205ENST00000457023 BICDL1Q6ZP65 573 aa33.68■■■□□ 2.98
CAPN7-205ENST00000457023 TBC1D2BQ9UPU7 963 aa33.68■■■□□ 2.98
CAPN7-205ENST00000457023 CEP350Q5VT06 3117 aa33.67■■■□□ 2.98
CAPN7-205ENST00000457023 RNF181Q9P0P0 153 aa33.67■■■□□ 2.98
CAPN7-205ENST00000457023 C2CD5Q86YS7 1000 aa33.65■■■□□ 2.98
CAPN7-205ENST00000457023 TTLL6Q8N841 843 aa33.65■■■□□ 2.98
CAPN7-205ENST00000457023 H0YIN7 160 aa33.64■■■□□ 2.98
CAPN7-205ENST00000457023 RTF1Q92541 710 aaKnown RBP33.64■■■□□ 2.98
CAPN7-205ENST00000457023 USP16Q9Y5T5 823 aa33.64■■■□□ 2.98
CAPN7-205ENST00000457023 CARMIL3Q8ND23 1372 aa33.63■■■□□ 2.97
CAPN7-205ENST00000457023 HTATSF1O43719 755 aaKnown RBP33.63■■■□□ 2.97
CAPN7-205ENST00000457023 MCM10Q7L590 875 aa33.63■■■□□ 2.97
CAPN7-205ENST00000457023 ZNF330Q9Y3S2 320 aaPredicted RBP33.63■■■□□ 2.97
CAPN7-205ENST00000457023 CAMTA2O94983 1202 aa33.61■■■□□ 2.97
CAPN7-205ENST00000457023 BRIP1Q9BX63 1249 aa33.61■■■□□ 2.97
CAPN7-205ENST00000457023 PDZRN3Q9UPQ7 1066 aa33.6■■■□□ 2.97
CAPN7-205ENST00000457023 KDM2BQ8NHM5 1336 aa33.59■■■□□ 2.97
CAPN7-205ENST00000457023 PRR5LQ6MZQ0 368 aa33.59■■■□□ 2.97
CAPN7-205ENST00000457023 NPM2Q86SE8 214 aaKnown RBP33.59■■■□□ 2.97
CAPN7-205ENST00000457023 PRAMEF22A3QJZ6 481 aa33.58■■■□□ 2.97
CAPN7-205ENST00000457023 SNRPA1P09661 255 aaKnown RBP33.58■■■□□ 2.97
CAPN7-205ENST00000457023 PDE6BP35913 854 aa33.58■■■□□ 2.97
CAPN7-205ENST00000457023 DLEC1Q9Y238 1755 aa33.57■■■□□ 2.97
CAPN7-205ENST00000457023 PRELPP51888 382 aa33.57■■■□□ 2.96
CAPN7-205ENST00000457023 RASSF7Q02833 373 aa33.57■■■□□ 2.96
CAPN7-205ENST00000457023 DCTN1Q14203 1278 aa33.57■■■□□ 2.96
CAPN7-205ENST00000457023 RBM46Q8TBY0 533 aaKnown RBP33.57■■■□□ 2.96
CAPN7-205ENST00000457023 SETDB2Q96T68 719 aa33.57■■■□□ 2.96
CAPN7-205ENST00000457023 SCN7AQ01118 1682 aa33.57■■■□□ 2.96
CAPN7-205ENST00000457023 LMNB1P20700 586 aa33.56■■■□□ 2.96
CAPN7-205ENST00000457023 APLP1P51693 650 aa33.56■■■□□ 2.96
CAPN7-205ENST00000457023 DZIP3Q86Y13 1208 aaKnown RBP33.56■■■□□ 2.96
CAPN7-205ENST00000457023 ZC3H4Q9UPT8 1303 aaKnown RBP33.55■■■□□ 2.96
CAPN7-205ENST00000457023 SBF1O95248 1867 aa33.55■■■□□ 2.96
CAPN7-205ENST00000457023 RRAGCQ9HB90 399 aa33.54■■■□□ 2.96
CAPN7-205ENST00000457023 TAF7Q15545 349 aaPredicted RBP33.53■■■□□ 2.96
CAPN7-205ENST00000457023 CLEC4GQ6UXB4 293 aa33.53■■■□□ 2.96
CAPN7-205ENST00000457023 CCDC24Q8N4L8 307 aa33.53■■■□□ 2.96
CAPN7-205ENST00000457023 PIP4K2AP48426 406 aaPredicted RBP33.52■■■□□ 2.96
CAPN7-205ENST00000457023 C16orf71Q8IYS4 520 aaPredicted RBP33.52■■■□□ 2.96
CAPN7-205ENST00000457023 ZNF622Q969S3 477 aaKnown RBP eCLIP33.51■■■□□ 2.958e-13■□□□□ 8.7
CAPN7-205ENST00000457023 NFKBIEO00221 500 aa33.5■■■□□ 2.95
CAPN7-205ENST00000457023 FSTL1Q12841 308 aa33.49■■■□□ 2.95
CAPN7-205ENST00000457023 CNBD1Q8NA66 436 aa33.49■■■□□ 2.95
CAPN7-205ENST00000457023 ANKRD31Q8N7Z5 1873 aa33.48■■■□□ 2.95
CAPN7-205ENST00000457023 NBPF26B4DH59 902 aa33.48■■■□□ 2.95
CAPN7-205ENST00000457023 NBPF10Q6P3W6 841 aaKnown RBP33.48■■■□□ 2.95
CAPN7-205ENST00000457023 NBPF15Q8N660 670 aa33.48■■■□□ 2.95
CAPN7-205ENST00000457023 DNAJC5GQ8N7S2 189 aa33.48■■■□□ 2.95
CAPN7-205ENST00000457023 PLEKHF1Q96S99 279 aa33.48■■■□□ 2.95
CAPN7-205ENST00000457023 GLTPD2A6NH11 291 aa33.47■■■□□ 2.95
CAPN7-205ENST00000457023 RGL2O15211 777 aa33.47■■■□□ 2.95
CAPN7-205ENST00000457023 ST5P78524 1137 aa33.46■■■□□ 2.95
CAPN7-205ENST00000457023 MIS18AQ9NYP9 233 aa33.46■■■□□ 2.95
CAPN7-205ENST00000457023 C21orf2O43822 256 aa33.45■■■□□ 2.95
CAPN7-205ENST00000457023 SRGNP10124 158 aa33.45■■■□□ 2.95
CAPN7-205ENST00000457023 STYK1Q6J9G0 422 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms