RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 NWD2Q9ULI1 1742 aa12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 POTEB2H3BUK9 544 aa12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 LARP1Q6PKG0 1096 aaKnown RBP12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 CCDC146Q8IYE0 955 aa12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 TMUB1Q9BVT8 246 aa12.46□□□□□ -0.41
PTCHD1-202ENST00000456522 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 CCDC9Q9Y3X0 531 aaKnown RBP12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 SLIT2O94813 1529 aa12.45□□□□□ -0.42
PTCHD1-202ENST00000456522 AFF2P51816 1311 aa12.44□□□□□ -0.42
PTCHD1-202ENST00000456522 GPR153Q6NV75 609 aa12.44□□□□□ -0.42
PTCHD1-202ENST00000456522 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
PTCHD1-202ENST00000456522 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
PTCHD1-202ENST00000456522 USP21Q9UK80 565 aa12.44□□□□□ -0.42
PTCHD1-202ENST00000456522 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
PTCHD1-202ENST00000456522 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
PTCHD1-202ENST00000456522 TTC13Q8NBP0 860 aa12.43□□□□□ -0.42
PTCHD1-202ENST00000456522 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
PTCHD1-202ENST00000456522 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
PTCHD1-202ENST00000456522 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
PTCHD1-202ENST00000456522 PNNQ9H307 717 aaKnown RBP12.42□□□□□ -0.42
PTCHD1-202ENST00000456522 CRB1P82279 1406 aa12.42□□□□□ -0.42
PTCHD1-202ENST00000456522 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 BCL9LQ86UU0 1499 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 RIMBP2O15034 1052 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 NEFMP07197 916 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 ZDHHC16Q969W1 377 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
PTCHD1-202ENST00000456522 GIGYF2Q6Y7W6 1299 aaKnown RBP12.4□□□□□ -0.42
PTCHD1-202ENST00000456522 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
PTCHD1-202ENST00000456522 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
PTCHD1-202ENST00000456522 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
PTCHD1-202ENST00000456522 KDRP35968 1356 aa12.4□□□□□ -0.42
PTCHD1-202ENST00000456522 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
PTCHD1-202ENST00000456522 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 APAF1O14727 1248 aa12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 NUDT7P0C024 238 aa12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 VPS72Q15906 364 aa12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 SALL2Q9Y467 1007 aaPredicted RBP12.39□□□□□ -0.43
PTCHD1-202ENST00000456522 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 SPATA31A5Q5VU36 1347 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 SPATA31A7Q8IWB4 1347 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 TTLL12Q14166 644 aaPredicted RBP12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 REPIN1Q9BWE0 567 aaKnown RBP12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
PTCHD1-202ENST00000456522 IL2RBP14784 551 aa12.37□□□□□ -0.43
PTCHD1-202ENST00000456522 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
PTCHD1-202ENST00000456522 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
PTCHD1-202ENST00000456522 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
PTCHD1-202ENST00000456522 MEGF6O75095 1541 aa12.37□□□□□ -0.43
PTCHD1-202ENST00000456522 CLCN1P35523 988 aa12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 WNK3Q9BYP7 1800 aa12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 ATRNO75882 1429 aa12.36□□□□□ -0.43
PTCHD1-202ENST00000456522 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 A0A0G2JS52 829 aa12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 MS4A1P11836 297 aa12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 MYT1Q01538 1121 aa12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 NFE2L2Q16236 605 aa12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 FAM98CQ17RN3 349 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
PTCHD1-202ENST00000456522 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 OATP04181 439 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 RIPK4P57078 832 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 ZNF530Q6P9A1 599 aaPredicted RBP12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 METTL3Q86U44 580 aaKnown RBP12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 GAS2L2Q8NHY3 880 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 GPCPD1Q9NPB8 672 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 ADGRG1Q9Y653 693 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
PTCHD1-202ENST00000456522 PADI6Q6TGC4 694 aa12.33□□□□□ -0.44
PTCHD1-202ENST00000456522 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
PTCHD1-202ENST00000456522 GLI3P10071 1580 aa12.33□□□□□ -0.44
PTCHD1-202ENST00000456522 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
PTCHD1-202ENST00000456522 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
PTCHD1-202ENST00000456522 DDX54Q8TDD1 881 aaKnown RBP12.32□□□□□ -0.44
PTCHD1-202ENST00000456522 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
PTCHD1-202ENST00000456522 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms