RNA–Protein interactions for RNA: ENST00000456489.1

ITSN1-221, Transcript of intersectin 1, humanhuman

TSL 2

Gene ITSN1, Length 485 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-221ENST00000456489 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
ITSN1-221ENST00000456489 RBM19Q9Y4C8 960 aaKnown RBP7.99□□□□□ -1.13
ITSN1-221ENST00000456489 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
ITSN1-221ENST00000456489 KIDINS220Q9ULH0 1771 aa7.99□□□□□ -1.13
ITSN1-221ENST00000456489 ZNF142P52746 1687 aaPredicted RBP7.98□□□□□ -1.13
ITSN1-221ENST00000456489 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
ITSN1-221ENST00000456489 GCC2Q8IWJ2 1684 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 TROQ12816 1431 aaPredicted RBP7.98□□□□□ -1.13
ITSN1-221ENST00000456489 TOM1O60784 492 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
ITSN1-221ENST00000456489 TRIM47Q96LD4 638 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 SENP2Q9HC62 589 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 PPP4R2Q9NY27 417 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 ABCC1P33527 1531 aa7.98□□□□□ -1.13
ITSN1-221ENST00000456489 ZMYM3Q14202 1370 aa7.97□□□□□ -1.13
ITSN1-221ENST00000456489 CEP170BQ9Y4F5 1589 aaPredicted RBP7.97□□□□□ -1.13
ITSN1-221ENST00000456489 MRPL14Q6P1L8 145 aaKnown RBP7.97□□□□□ -1.13
ITSN1-221ENST00000456489 GDPD2Q9HCC8 539 aa7.97□□□□□ -1.13
ITSN1-221ENST00000456489 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
ITSN1-221ENST00000456489 PLA2R1Q13018 1463 aa7.97□□□□□ -1.13
ITSN1-221ENST00000456489 PREX2Q70Z35 1606 aa7.96□□□□□ -1.13
ITSN1-221ENST00000456489 PTPRKQ15262 1439 aa7.96□□□□□ -1.13
ITSN1-221ENST00000456489 DHX9Q08211 1270 aaKnown RBP7.96□□□□□ -1.14
ITSN1-221ENST00000456489 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
ITSN1-221ENST00000456489 ZFP42Q96MM3 310 aa7.96□□□□□ -1.14
ITSN1-221ENST00000456489 PURBQ96QR8 312 aaKnown RBP7.96□□□□□ -1.14
ITSN1-221ENST00000456489 PGPEP1Q9NXJ5 209 aa7.96□□□□□ -1.14
ITSN1-221ENST00000456489 LRRIQ1Q96JM4 1722 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 ESPNB1AK53 854 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 GIGYF1O75420 1035 aaPredicted RBP7.95□□□□□ -1.14
ITSN1-221ENST00000456489 ABL2P42684 1182 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 HNRNPUQ00839 825 aaKnown RBP eCLIP7.95□□□□□ -1.14
ITSN1-221ENST00000456489 CBLBQ13191 982 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 IRF5Q13568 498 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 MEIOBQ8N635 442 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 ZNF775Q96BV0 537 aaPredicted RBP7.95□□□□□ -1.14
ITSN1-221ENST00000456489 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
ITSN1-221ENST00000456489 POLR1AO95602 1720 aaPredicted RBP7.95□□□□□ -1.14
ITSN1-221ENST00000456489 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
ITSN1-221ENST00000456489 HSPA5P11021 654 aaKnown RBP7.94□□□□□ -1.14
ITSN1-221ENST00000456489 SCARF1Q14162 830 aa7.94□□□□□ -1.14
ITSN1-221ENST00000456489 C6orf118Q5T5N4 469 aa7.94□□□□□ -1.14
ITSN1-221ENST00000456489 ERICH6Q7L0X2 663 aa7.94□□□□□ -1.14
ITSN1-221ENST00000456489 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
ITSN1-221ENST00000456489 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
ITSN1-221ENST00000456489 ZBED9Q6R2W3 1325 aa7.94□□□□□ -1.14
ITSN1-221ENST00000456489 CPS1P31327 1500 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 SAMD9LQ8IVG5 1584 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 CDC42BPAQ5VT25 1732 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 GGT6Q6P531 493 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 ZNF784Q8NCA9 323 aaPredicted RBP7.93□□□□□ -1.14
ITSN1-221ENST00000456489 MPHOSPH9Q99550 1183 aa7.93□□□□□ -1.14
ITSN1-221ENST00000456489 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
ITSN1-221ENST00000456489 RPRD2Q5VT52 1461 aaKnown RBP7.93□□□□□ -1.14
ITSN1-221ENST00000456489 UPP2O95045 317 aa7.92□□□□□ -1.14
ITSN1-221ENST00000456489 BMP2P12643 396 aa7.92□□□□□ -1.14
ITSN1-221ENST00000456489 Q6ZVU0 165 aa7.92□□□□□ -1.14
ITSN1-221ENST00000456489 ROCK2O75116 1388 aaKnown RBP7.92□□□□□ -1.14
ITSN1-221ENST00000456489 CCDC7Q96M83 1385 aa7.92□□□□□ -1.14
ITSN1-221ENST00000456489 SHANK2Q9UPX8 1470 aa7.92□□□□□ -1.14
ITSN1-221ENST00000456489 DNMT1P26358 1616 aaKnown RBP7.92□□□□□ -1.14
ITSN1-221ENST00000456489 VAC14Q08AM6 782 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 SEPT12Q8IYM1 358 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 WASHC2AQ641Q2 1341 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
ITSN1-221ENST00000456489 A2ML1A8K2U0 1454 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 SYCP2Q9BX26 1530 aa7.91□□□□□ -1.14
ITSN1-221ENST00000456489 ATP7AQ04656 1500 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 A2MP01023 1474 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 ANKRD30BQ9BXX2 1392 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 LILRA1O75019 489 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 HNRNPMP52272 730 aaKnown RBP eCLIP7.9□□□□□ -1.14
ITSN1-221ENST00000456489 MCCD1P59942 119 aaPredicted RBP7.9□□□□□ -1.14
ITSN1-221ENST00000456489 ZNF592Q92610 1267 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 POM121Q96HA1 1249 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 AGBL1Q96MI9 1066 aa7.9□□□□□ -1.14
ITSN1-221ENST00000456489 TSEN34Q9BSV6 310 aaKnown RBP7.9□□□□□ -1.14
ITSN1-221ENST00000456489 PRKRIP1Q9H875 184 aaPredicted RBP7.9□□□□□ -1.14
ITSN1-221ENST00000456489 NEURL4Q96JN8 1562 aa7.89□□□□□ -1.15
ITSN1-221ENST00000456489 FLIIQ13045 1269 aa7.89□□□□□ -1.15
ITSN1-221ENST00000456489 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
ITSN1-221ENST00000456489 PLXNC1O60486 1568 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 INO80Q9ULG1 1556 aaPredicted RBP7.88□□□□□ -1.15
ITSN1-221ENST00000456489 DAPK1P53355 1430 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
ITSN1-221ENST00000456489 RELBQ01201 579 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 L3MBTL2Q969R5 705 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
ITSN1-221ENST00000456489 MRS2Q9HD23 443 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 RRP7BPQ9NSQ0 103 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 CEP126Q9P2H0 1117 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 ADGBQ8N7X0 1667 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 VWDEQ8N2E2 1590 aa7.88□□□□□ -1.15
ITSN1-221ENST00000456489 SPATA31E1Q6ZUB1 1445 aa7.87□□□□□ -1.15
ITSN1-221ENST00000456489 SMG6Q86US8 1419 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms