RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RSPH14Q9UHP6 348 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 TRAPPC8Q9Y2L5 1435 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 TUBGCP6Q96RT7 1819 aa5.48□□□□□ -1.53
DEPDC1-202ENST00000456315 PTMAP06454 111 aaKnown RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 E2F4Q16254 413 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 RAPGEF6Q8TEU7 1601 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 NR1I2O75469 434 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 ABL1P00519 1130 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 PNMA6AP0CW24 399 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 MX1P20591 662 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 CCZ1BP86790 482 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 CCZ1P86791 482 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 SART3Q15020 963 aaKnown RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 DHX37Q8IY37 1157 aaKnown RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 ANKRD44Q8N8A2 993 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 SYCP2Q9BX26 1530 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 ABCA8O94911 1581 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 PLCH2O75038 1416 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 TNNT1P13805 278 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 CLCN6P51797 869 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 CBX8Q9HC52 389 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 EMILIN1Q9Y6C2 1016 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 H3BQF6 201 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 PACS2Q86VP3 889 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 FEZ1Q99689 392 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 HSD3B7Q9H2F3 369 aa5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 RNF216Q9NWF9 866 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 MAGI1Q96QZ7 1491 aaPredicted RBP5.47□□□□□ -1.53
DEPDC1-202ENST00000456315 MSH6P52701 1360 aa5.46□□□□□ -1.53
DEPDC1-202ENST00000456315 A1BGP04217 495 aa5.46□□□□□ -1.53
DEPDC1-202ENST00000456315 DDX11Q96FC9 970 aa5.46□□□□□ -1.53
DEPDC1-202ENST00000456315 PLEKHD1A6NEE1 506 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 DHX16O60231 1041 aaKnown RBP5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 MAP4K4O95819 1239 aaPredicted RBP5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 CHMLP26374 656 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 C11orf57Q6ZUT1 292 aaPredicted RBP5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 IL1RAPL2Q9NP60 686 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 TOMM22Q9NS69 142 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 ARHGEF40Q8TER5 1519 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 ASPMQ8IZT6 3477 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 ITSN2Q9NZM3 1697 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 TBC1D8O95759 1140 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 GOLGA8FQ08AF8 430 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 GOLGA8DPQ0D2H9 430 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 TAF7LQ5H9L4 462 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 DACT1Q9NYF0 836 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 A0A1W2PP64 1363 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 N4BP1O75113 896 aaKnown RBP5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 AK2P54819 239 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 CCDC93Q567U6 631 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 KIAA0232Q92628 1395 aa5.46□□□□□ -1.54
DEPDC1-202ENST00000456315 MYO1CO00159 1063 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 PTH1RQ03431 593 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 BMS1Q14692 1282 aaKnown RBP5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 KLHL34Q8N239 644 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ESYT1Q9BSJ8 1104 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 EHD4Q9H223 541 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 SPG7Q9UQ90 795 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 CLTCL1P53675 1640 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 HECW2Q9P2P5 1572 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 PTCH1Q13635 1447 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 TRHP20396 242 aaPredicted RBP5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 TRIM65Q6PJ69 517 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 CDC37L1Q7L3B6 337 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 C10orf67Q8IYJ2 551 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 PNPLA6Q8IY17 1366 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 NUP160Q12769 1436 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ZFHX4Q86UP3 3567 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 FOXO3O43524 673 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 TMEM87AQ8NBN3 555 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 DNAJC25Q9H1X3 360 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 POLD4Q9HCU8 107 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 BPTFQ12830 3046 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ABCC11Q96J66 1382 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 POLR3GO15318 223 aaPredicted RBP5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 BRPF1P55201 1214 aaPredicted RBP5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 KAT2BQ92831 832 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 L2HGDHQ9H9P8 463 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ANO2Q9NQ90 1003 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ADGRB1O14514 1584 aa5.45□□□□□ -1.54
DEPDC1-202ENST00000456315 ADD1P35611 737 aaKnown RBP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 FBLN2P98095 1184 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 GABPB1Q06547 395 aaPredicted RBP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 KCTD19Q17RG1 926 aaPredicted RBP5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 FILIP1Q7Z7B0 1213 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 PLA2G4DQ86XP0 818 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 ZNF592Q92610 1267 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 GJB4Q9NTQ9 266 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 ERCC6Q03468 1493 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 SHANK2Q9UPX8 1470 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 GOLGA6L22H0YM25 854 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 SLFNL1Q499Z3 407 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 GCC1Q96CN9 775 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 HTTP42858 3142 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 LRRC7Q96NW7 1537 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 A0A0G2JLW4 131 aa5.44□□□□□ -1.54
DEPDC1-202ENST00000456315 MBD3O95983 291 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms