RNA–Protein interactions for RNA: ENST00000456297.6

DNMT3B-206, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-206ENST00000456297 TSHZ3Q63HK5 1081 aa16.52■□□□□ 0.24
DNMT3B-206ENST00000456297 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
DNMT3B-206ENST00000456297 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
DNMT3B-206ENST00000456297 LARP1Q6PKG0 1096 aaKnown RBP16.52■□□□□ 0.23
DNMT3B-206ENST00000456297 ERBB3P21860 1342 aa16.52■□□□□ 0.23
DNMT3B-206ENST00000456297 PPP1R9BQ96SB3 815 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 CRB1P82279 1406 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 NUCB2P80303 420 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 ZSCAN23Q3MJ62 389 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 PTPRCP08575 1304 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
DNMT3B-206ENST00000456297 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 EYA1Q99502 592 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 COL14A1Q05707 1796 aaKnown RBP16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 AFF2P51816 1311 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 TOM1L2Q6ZVM7 507 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 GPT2Q8TD30 523 aa16.5■□□□□ 0.23
DNMT3B-206ENST00000456297 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
DNMT3B-206ENST00000456297 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
DNMT3B-206ENST00000456297 ZNF445P59923 1031 aa16.49■□□□□ 0.23
DNMT3B-206ENST00000456297 CCDC173Q0VFZ6 552 aa16.49■□□□□ 0.23
DNMT3B-206ENST00000456297 USP21Q9UK80 565 aa16.49■□□□□ 0.23
DNMT3B-206ENST00000456297 PDE1AP54750 535 aa16.48■□□□□ 0.23
DNMT3B-206ENST00000456297 RBM27Q9P2N5 1060 aaKnown RBP16.48■□□□□ 0.23
DNMT3B-206ENST00000456297 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
DNMT3B-206ENST00000456297 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
DNMT3B-206ENST00000456297 ST18O60284 1047 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 NSFL1CQ9UNZ2 370 aaKnown RBP16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 SLIT2O94813 1529 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 ERC2O15083 957 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
DNMT3B-206ENST00000456297 WDR17Q8IZU2 1322 aa16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 REC8O95072 547 aa16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 MTHFSDQ2M296 383 aaKnown RBP16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 UNC5CLQ8IV45 518 aa16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
DNMT3B-206ENST00000456297 PALD1Q9ULE6 856 aa16.45■□□□□ 0.22
DNMT3B-206ENST00000456297 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
DNMT3B-206ENST00000456297 SALL3Q9BXA9 1300 aa16.45■□□□□ 0.22
DNMT3B-206ENST00000456297 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
DNMT3B-206ENST00000456297 NEK4P51957 841 aa16.44■□□□□ 0.22
DNMT3B-206ENST00000456297 ZSCAN30Q86W11 494 aa16.44■□□□□ 0.22
DNMT3B-206ENST00000456297 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
DNMT3B-206ENST00000456297 TMEM63CQ9P1W3 806 aa16.44■□□□□ 0.22
DNMT3B-206ENST00000456297 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
DNMT3B-206ENST00000456297 HMMRO75330 724 aa16.43■□□□□ 0.22
DNMT3B-206ENST00000456297 ABCC6O95255 1503 aa16.43■□□□□ 0.22
DNMT3B-206ENST00000456297 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
DNMT3B-206ENST00000456297 NRAPQ86VF7 1730 aa16.42■□□□□ 0.22
DNMT3B-206ENST00000456297 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 IL25Q9H293 177 aa16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 QTRT2Q9H974 415 aaKnown RBP16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
DNMT3B-206ENST00000456297 GNAI2P04899 355 aa16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 NOL8Q76FK4 1167 aaKnown RBP16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 PDLIM2Q96JY6 352 aa16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 SYCE3A1L190 88 aa16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 RGS17Q9UGC6 210 aaPredicted RBP16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 SPATA31A1Q5TZJ5 1347 aa16.4■□□□□ 0.22
DNMT3B-206ENST00000456297 VPS72Q15906 364 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 EP400Q96L91 3159 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 SPATA31A5Q5VU36 1347 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 SPATA31A7Q8IWB4 1347 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 MX1P20591 662 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 HSP90AA2PQ14568 343 aaPredicted RBP16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
DNMT3B-206ENST00000456297 CHMLP26374 656 aa16.38■□□□□ 0.21
DNMT3B-206ENST00000456297 FLIIQ13045 1269 aa16.38■□□□□ 0.21
DNMT3B-206ENST00000456297 LRRCC1Q9C099 1032 aa16.38■□□□□ 0.21
DNMT3B-206ENST00000456297 A0A0G2JS52 829 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 KDRP35968 1356 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 BRD1O95696 1058 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 FKBP5Q13451 457 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 RILPL2Q969X0 211 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 ANO2Q9NQ90 1003 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 TUBGCP6Q96RT7 1819 aa16.37■□□□□ 0.21
DNMT3B-206ENST00000456297 CUL4AQ13619 759 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms